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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00020936 ID=TCONS_00020936|Name=TCONS_00020936|organism=Clytia hemisphaerica|type=transcript|length=1787bp
AGAAAATAAAACGCAATTCAAAGTTGGATAAAAAATGGAACCAAAAATTA
TGAGCAACATCCCTAACCTAAAATCCGAATTCCCATCTATGAAATCCGAT
TTTTCAATGGCTTCAATTTTGCTGGAAGAAAAAGATAAGGAAAAAGCGAA
ACCAAAACCGATTATCCCGTGCAGATTGGAAAATATAAAGGACACGCCAT
GGTTGAGACTGAATAAGAAAATAGCCGCAGATTTATCTTCGAGAGTGAAA
CCAAGGATTGAtaatatcgggaaatcgggaaatggAGGGATCAGAGTGAG
GCTAGATGAAATGGGATTGTGGAAAAGTTTTCATCAGTTGACCAATGAGA
TGATTGTCACCAAAAATGGAAGACGAATGTTTCCAGTACTAAAAACATCC
ATTCAAGGATTGGACCCTAATGCGATGTATTCCATAATGTTGGACTTTGT
TCCTGTAGATGAACACCGGTGGAAATTCGTCAATGGGGAGTGGTCCCGTG
GTGGAAAACCGGAACCCACATCAAGTTCCCGGGTGTATGTTCATCCGGAC
TCACCTAACTTCGGAGCACATTGGATGAAAAATTCCATCGTTTTTTCGAA
AGTAAAACTTACcaataaagaaaataacaataatcaAGTGGTGATGCTGA
ATTCACTGCACAAATACGAACCACGTATGCATGTTTTAAAGGTGGGTAGC
AAAGAATCAGAAAGAACGGTTTCCACTCACTCATTTGAAGAAACAGTTTT
TATCGCTGTCACTGCTTACCAAAATGAAGAGATCACATCACTAAAGATCA
AATACAATCCATTCGCAAAAGCTTTCTTAGACGCCAAAGAACGTTCAGAG
CAACAAATCGCAACCCACCCAAGACGTTTTGAATTTCCTTGCATACCGCC
ACCAACGGTCGGGGGTCCAGGAGCCCCATGTAGATGCAGCTTAGATGGAT
ACCCTTTCCATCGGCACCATCCTTCGTCCCCGCCAGAGTATCCCAGGTCC
TTTAGTTATCCTTACGCAACAATTTATGAACATGATGGCAAGCAACCAAG
GGCGGTTCATTATGGAACGAGACTACACCCATATTCTCCACCCTCGAGtg
tttATCCATTTATGACGCCATCTCCGCCCCCTCAACTCCCGCCACAGTGT
CATCCTCCAATCAAACCGACCTTCTTTGCAGAAGATTTTCAAAGAACACG
GCATTCCTCTTCATCCTCAACAAATCACCGGTCATGCTCAATACCGGGCT
GCTCGTGTAACGGAGCCAACCGATATCCTTCTATATCTGTTCCTTATCCG
CATTATAAAAGACCATACGATACGGAATCACTTCATTTAAAATCACCGGT
ACAACCGAATGATACAAGACAGCGTAGATATAGTACTACACCAGATATTG
AGAACATTGAACAATCTTCAAGAGAAAATTCAAGGGGAAGCTCACCAAGT
ATCTCCCCGACACTTAAACGATCTAGAAATGATTCTTAACCCTATTTATA
CTTAGGTTTTAGGGGTGGCTCAAAACTACGGGGGCTGTTCCTGTActacc
ccttaacttttgatctagtcggtctttttcgatgaaatttggtacacaag
atttttttgatgacgtcactcaaaGTGAGGAAAAACctaaatttcctttg
ttcttataaaagctattgtattctaacaaaggctttagaaaaagttTCTC
TGAATCTAGACAGCTTGTTTTATCctcaatattcaataaattacggttta
aacgatatatttgacataaaaaataaatttgtatcgG Run BLAST on NCBI transcript from alignment at sc0000374:62779..72925+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00020936 ID=TCONS_00020936|Name=TCONS_00020936|organism=Clytia hemisphaerica|type=transcript|length=10147bp|location=Sequence derived from alignment at sc0000374:62779..72925+ (Clytia hemisphaerica)
AGAAAATAAAACGCAATTCAAAGTTGGATAAAAAATGGAACCAAAAATTA
TGAGCAACATCCCTAACCTAAAATCCGAATTCCCATCTATGAAATCCGAT
TTTTCAATGGCTTCAATTTTGCTGGAAGAAAAAGATAAGGAAAAAGCGAA
ACCAAAACCGATTATCCCGTGCAGATTGGAAAATATAAAGGACACGCCAT
GGTTGAGACTGAATAAGAAAATAGCCGCAGATTTATCTTCGAGAGTGAAA
CCAAGGATTGAtaatatcgggaaatcgggaaatggAGGGATCAGAGTGAG
GCTAGATGAAATGGGATTGTGGAAAAGTTTTCATCAGTTGACCAATGAGA
TGATTGTCACCAAAAATGGAAGGTAAAAGAATTAGAATTATTTGAAGCCA
CATTTATCATATTCCTTTACACAGTTGAATTTTTTcatgttcttttcaaa
tttcacggAAAAAACTAACAGTAAATTAATAAGCTCATTCTTACCTTCcc
aacgataccaaactttgaagattgaaaatttagtgcacacttatcgtgaa
tagaatTTAGATAAGGTAACTGCTCACAGATTTCTCGtggaagtgtgtcc
agttttgaagtacagttgacgctcttcaATTTGAcgttcgatacgctcca
ttattcgataatattgaaagtcactgtcaaAAAGCAACTCTCTTAAACGa
cactctactattcgatacgctccctcttgatgaaaatcctttgatccttg
aaaatcgaattagaggaCGCCAACAGTCCGCCGTGTTGTTTACTAATTTA
CTTTAGTTTACCGAacgttcaaatttcaaaacatctgATTTGAAAACAAG
AGAACTGGCTAGTTAGCTTAATTTTGGACACGCTTCCTTTTATATGAGAA
GCCCGATCCTGTCAAATTGTTAAGAGATCAGTGATCCAGTCAAATTATTA
AGAGATCAGTGTTTGAGGCTCATCTTTATGCCTGGATTCAATTGCCAtct
atattttatctttttaccAATCAACTTCTTCGATCTcattttgaataaca
aactaaacctcttaaaaaaattcagtggatTTCTGAGTTTAGAGAAGAAA
TACTTTAGAATAATCTTCAAACATTTCAAACAGTCGATTTTCAATTCCCC
TTTGCATTTAGCTCCTTCGTTTTGGTAAGAATCTCAACGGTTgactgaga
cagggatgtgctATTACTCGCGAGCATTCGAGTCATAAAACGGATTGcaa
cttcaaaattttcaatttctaatttctgAGTTAAAATCTTCTGTTCTTTT
AATCATATTTAGACGAATGTTTCCAGTACTAAAAACATCCATTCAAGGAT
TGGACCCTAATGCGATGTATTCCATAATGTTGGACTTTGTTCCTGTAGAT
GAACACCGGTGGAAATTCGTCAATGGGGAGTGGTCCCGTGGTGGAAAACC
GGAACCCACATCAAGTTCCCGGGTGTATGTTCATCCGGACTCACCTAACT
TCGGAGCACATTGGATGAAAAATTCCATCGTTTTTTCGAAAGTAAAACTT
ACcaataaagaaaataacaataatcaAGTGGTAAGACTTACACTAAAAAT
CCAtatcctttttgaaaaaaccttCAATTCCTAAATTTCTGCCTGTAAAC
CAGGCCAATACACTGGCGGaattaagacaatagagcaagtacgtcggaaa
aatgctaaggagtgcaacgctcgttaaaaacTGAAATTACAGTTACAaat
ctgataagttcgacagggTCTAAAGTCACTTTGTCACCCAGGGAAATTCA
GTTATTGTCTATTATTTGTTGGTTAGTTAACCATGTAACCCATAttatat
aaagaaaaaagtagTATTCGATATTCTCATGCTTTAAAACACCAGGGTTt
ggtgaagctatgaatgccatcctcagaagcttaCAGTTACAaatctgata
agttcgacagggTCTAAAGTCACTTTGTAACCCAGGGAAATTCAGTTAGT
ACCAAATACTCATGGCACTAAATTGTTTGCGTCGTTCACTCTTCAATTTA
ACAAATCAACCTACTCGAAtgaatttcagccaaatcgaatgGGCTAATCT
CTATATTTGTCTGCAAATCATGTTTATAATTATCCAAACCTACAACtgat
taaaaataccaaatcCTTCCCAGCCCCAGTGCTCGATATTGATTTCATGC
GATTTCAAAAAGTAATGGATgctaaaaaaaaagtgaaatcaaTGTCTAAT
TTTCAGGTGATGCTGAATTCACTGCACAAATACGAACCACGTATGCATGT
TTTAAAGGTGGGTAGCAAAGAATCAGAAAGAACGGTTTCCACTCACTCAT
TTGAAGAAACAGTTTTTATCGCTGTCACTGCTTACCAAAATGAAGAGGTG
AGTTTGGTATCCTGCAAACTGACCCTGTAAATGCAGGTCAATCACTATTT
TCACACTTCATGTTGACACTTCATTCTAAATTTCATTTCTCcgtattttc
aaaacatttttttttttattctgccTTCTTATAGAAGCAACTTATATCCC
ATCGATCATAAACTACCTATATGGGTTAGCCACACTTTCTAATACGAGCT
TAGAAATAGAATCTACCGTCAGATAAAAAATATGTTCCACTGCAAAAGAT
TCAATGGTGTATGAATATTACAGTGTACAGTTtcgctttttggacctacc
gggaggtcctttaatttgaccgttgtctgttcgtctgttacaagcttttc
tcgggattggctcattagttttttttaattttttgNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNaattttggggggcaaatttgg
gccaaaaactacctaaaaataaggttttttggactttgtgcaaaattgct
tcattagtttttcctgatttttggcagaaggatagagtgcaaggtaccct
aaaatgtggctgaagtaatttttctcagaaaattttttttcgtcataaaa
ttttcaaaaaaagacgaccaagttacacaatgataaaagaaaataaatca
gacgtttttgcattgttctaaaacttattgtgtttgctcaataccaatag
taaaatATAGAACACCTACTTTTTgatcaacaggtaggtccattcagcat
gttgcttgttcttCAGGGGTTTGAGTATACCGCATTTGTGTCCCCTGTAT
CTctttgtgtcacagacccactgggaccccagccccactggaagatttag
caaaaatttcgtccccggtggaaaaatatcaaaatatcacAATCATCCCT
ACTGGGTTGTTTAACCTTAAAACATAGAATTTCTAACCCcctgaggaaaa
agttccacaggggttgtgagacaggggtgtcactTGGTATCAAGGGGAGA
TCTGTCATTAATTATCACATTTAAAATTGTtaacataaaatcaaaaaaaa
aactattaagTAGAAAATCTATCCAAAATCTAAAAAACTCTACCTGCAGG
GTTTTACGATTACACAAGATTGAATGCATGGTTTGggaaagaaaggagaa
aaataaacacttacagtatatggccccaaaacggagacggcccccaaaac
ggaggttttcattaaaatgaagattctgacttgtagatttatcagaatta
aacaatttttgtttattttgaaagaatgatggttatacttaaaaatgagc
ctgtttttgctggtttgggacagattcaaaataacatatttgcgtccaaa
ggaaatattttaacaccaaaattagataaaaattgcatatagctcactct
agctccttggatattgNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtgttaaaggttttca
tgcagcaaaaatttttgtaaaatctcttttcctctagatttgagagaaat
ttcaaatttgatcgccgttttgggggccacatactgtacggAAGACCCTT
GTCATCAAAAAGCTTCCCATataattttagtgtttttgaaaaacattcct
ATGCCAATAGGATTATCTTTCTATGTCATCAAGGTGATAAAAACACGCAG
GCATGTTAAGTAGTCTAGCAGATATGCTGAATTGAAGTTTGCAACATTCG
TAGAGAATGAGACTTATCCTTCAGTGAAGTTTTCCCAGggccttttttca
aatattgtatTTCCGCCCTAACTAACCCTGTGGCGAAGCTGGTAATTTCG
AcgctgaaaaaaatgaaatccttcaattttttttgttgaaaaacaaTAAA
CGTGGAATGAGTAGGCGTGGCTTCTGAGGGTAGCAGAGTCAGACATTTAT
GACAGGTCTCAGAATTGAGCTTATTTTGACGTGCAAAATTCTCTCATTAA
TCTGAAGTTTAttaaattagtaaatttgatcTCACGATATTAAGTCACTT
GTATGATTTAGAGAAATTCTTAAGTGCCTTCTCGTAGGGAGTTTTCACTG
TGTCTGCTAGATTTGGTATTTTCATGTCACTAATCTGAATTTAAAATCAG
CCGTGtcagatttttattacaaaaatggattttatttttctttaacccgA
CGATATCATTTTAATCTCTGGGGACTCAACGAAAGGAGCTTAAAGGAGAT
TGAAGTCTtgtgtttaaaaattttaggaTATTCTTATCACAGGGGCGTAA
ATTTAGGTCAACTTTGCTAGTTGGTAGAGTCCAACCTTCTGTGACACAGG
GTGTATCATGTATTATGTACAAGACGTCCACGAATTTTAGACAAATTGGC
AAAGCAATTATTATTTTCCTGGTGTGAATACAAAAAATTCTAGACAAGGC
ATCGACAGTTGTGAAGCAAAGataaattaaaatcaataaatctCTCCTAT
CTTCCTAGATCACATCACTAAAGATCAAATACAATCCATTCGCAAAAGCT
TTCTTAGACGCCAAAGAACGTTCAGAGCAACAAATCGCAATCCACCCAAG
ACGTTTTGAATTTCCTTGCATACCACCACCAACGGTCGGGGGTCCAGGAG
CCCTATGTAGATGCAGCTTAGATGGATACCCTTTCCATCGGCACCATCAN
agacaatagagcaagtacgtcggaaaaatgctaaggagtgcaacgctcgt
taaaaacTGAAATTACAGTTACAaatctgataagttcgacagggTCTAAA
GTCACTTTGTCACCCAGGGAAATTCAGTTATTGTCTATTATTTGTTGGTT
AGTTAACCATGTAACCCATAttatataaagaaaaaagtagTATTCGATAT
TCTCATGCTTTAAAACACCAGGGTTtggtgaagctatgaatgccatcctc
agaagcttaCAGTTACAaatctgataagttcgacagggTCTAAAGTCACT
TTGTAACCCAGGGAAATTCAGTTAGTACCAAATACTCATGGCACTAAATT
GTTTGCGTCGTTCACTCTTCAATTTAACAAATCAACCTACTCGAAtgaat
ttcagccaaatcgaatgGGCTAATCTCTATATTTGTCTGCAAATCATGTT
TATAATTATCCAAACCTACAACtgattaaaaataccaaatcCTTCCCAGC
CCCAGTGCTCGATATTGATTTCATGCGATTTCAAAAAGTAATGGATgcta
aaaaaaaagtgaaatcaaTGTCTAATTTTCAGGTGATGCTGAATTCACTG
CACAAATACGAACCACGTATGCATGTTTTAAAGGTGGGTAGCAAAGAATC
AGAAAGAACGGTTTCCACTCACTCATTTGAAGAAACAGTTTTTATCGCTG
TCACTGCTTACCAAAATGAAGAGGTGAGTTTGGTATCCTGCAAACTGACC
CTGTAAATGCAGGTCAATCACTATTTTCACACTGATTGCCTTCATGTTGA
CACAGCAttctaaatttcatttttccgtgttttcaaaacatttttttttt
aattctgccTTCTTATAGAAGTAACTTATATCCCATCGATCATAAACTAC
CTATGTGGGTTAGCCACACTTTCTAATACGAGCTTAGAAATAGAATCTAC
CGGCAGATAAAAAATATGTTCCACTACAAAAGATTCAATGgtgtcccagc
tggcacataacgttgcttcgacgttcatctaacgttatatggacgttgtg
aacgttagatgaacgttgcaacaacgttgtgtgccagttggtGTAAGAAT
ATTACAGTGTACAGTTTCGCTTTTTCTTTTCTGGACTCTCGAAAGACTCT
TAAGAACCTTTGAACTGAATGACCGAAATATTCTCTAAGTGAAGGGTACG
TTgggatttcaaaagttttatgccttcttatttttgccattaTTTGGTAC
ACTCGAAGCCAGCATTCTTCAGGGGTTTGAGTATACCACTTGACCCCTGT
ATCTctttgtgtcacagacccactaggaccccagccccactaggacccca
gccccactggaagatttagcaaaaatttcgtccccggtgggaaaatatca
aaatatcacAATCATCCCTACTGGGTTGTTTAACCCTTAAacatagaatt
tctatccccctgaggaaaaagttccaccggggctgtgagacaggggtgtc
actTGGTATCAAGGGGGGAGGGTCTGTCATTAATTATCACAtttaaaatt
gtcaaaataaaatcaaaaagaaactaTTAAGTAGAAAATCtaactaaaat
ctaaaaaactcTACCTGCAGGGTTTTACGATTACACAAGATTGAAAGGTT
TGTGAAAGAGAGGAGGAAAAAAAACACTTACGAAAGACCCTGACGTGtcg
tcatcaaaaaacttttcccatataattttagtgtttttgaaaaacattcc
tATGCCAATAGGATTAGCTTTCTATGTCATCAAGGTGATAAAAACACGCA
GGCATGTTAAGTAGTCTAGCAGATATGCTGAATTGAAGTTTGCAACATTC
GTAGAGAATGAGACTTATCCTTCAGTGAAGTTTTCCCAGggccttttttc
aaatattgtatTTCCGCCCTAACTAACCCTGTGGCGAAGCTGGTAATTTC
GAcgctgaaaaaaatgaaatccttcaattttttttgttgaaaaacaaTAA
ACGTGGAATGAGTAGGCGTGGCTTCTGAGGGTAGCAGAGTCAGACATTTA
TGACAGGTCTCAGAATTGAGCTTATTTTGACGTGCAAAATTCTCTCATTA
ATCTGAAGTTTATTAAATTAgtaaatttaatctcgcgataTTAAGTCACT
TGTATGATTTAGAGAAATTCTTAAGTGCCTTTTCGTAGGGAGTTTTCACT
GCGTCTGCTAGATTTGGTATTTTCATGTCAATAATCTGAATTTAAAATCA
GTCGTGtcagatttttattacaaaaatggATTTTATTTGTCTTTAACCCG
ACGATATCATTTTAATCTCTGGGGACTCAACGAAAGGAGCTTAAAGGAGA
TTGAAGTCTtgtgtttaaaaattttaggaTATTCTTATCACAGGGGCGTA
AATTTAGGTCAACTTTGCTAGTTGGTAGAGTCCAACCTTCTGTGACACAG
GGTGTATCATGTATTATGTACAAGACGTCCACGAATTTTAGACAAATTGG
CAAAGCAATTATTATTTTCCTGGTGTGAATACAAAAAATTCTAGACAAGG
CATCGACAGTTGTGAAGCAAAGataaattaaaatcaataaatctCTCCTA
TCTTTCCAGATCACATCACTAAAGATCAAATACAATCCATTCGCAAAAGC
TTTCTTAGACGCCAAAGAACGTTCAGAGCAACAAATCGCAACCCACCCAA
GACGTTTTGAATTTCCTTGCATACCGCCACCAACGGTCGGGGGTCCAGGA
GCCCCATGTAGATGCAGCTTAGATGGATACCCTTTCCATCGGCACCATCC
TTCGTCCCCGCCAGAGTATCCCAGGTCCTTTAGTTATCCTTACGCAACAA
TTTATGAACATGATGGCAAGCAACCAAGGGCGGTTCATTATGGAACGAGA
CTACACCCATATTCTCCACCCTCGAGtgtttgtaagtatttttgcaACTc
tctttttctcaattttttataGTAATTTTGTAACCTCATTCTCCCCCTCC
ATCTTCAGTCAATAATTTTGCACTCTTCATTTCGAACTTTGTTGTTTGTT
ATAGTACTTCAGGACACCCTTGTCTCATCTTTGATTCTAAATCGAGATTT
GCAagcaaatgtttcatttcaacTTTCTGCATTCTGGTACTAGTGAGTtc
cttttgacattttttaaccTACATTAACTATAACCAACTGTGTTATTTCT
TCTTCTATTTAAGATCCATTTATGACGCCATCTCCGCCCCCTCAACTCCC
GCCACAGTGTCATCCTCCAATCAAACCGACCTTCTTTGCAGAAGATTTTC
AAAGAACACGGCATTCCTCTTCATCCTCAACAAATCACCGGTCATGCTCA
ATACCGGGCTGCTCGTGTAACGGAGCCAACCGATATCCTTCTATATCTGT
TCCTTATCCGCATTATAAAAGACCATACGATACGGAATCACTTCATTTAA
AATCACCGGTACAACCGAATGATACAAGACAGCGTAGATATAGTACTACA
CCAGATATTGAGAACATTGAACAATCTTCAAGAGAAAATTCAAGGGGAAG
CTCACCAAGTATCTCCCCGACACTTAAACGATCTAGAAATGATTCTTAAC
CCTATTTATACTTAGGTTTTAGGGGTGGCTCAAAACTACGGGGGCTGTTC
CTGTActaccccttaacttttgatctagtcggtctttttcgatgaaattt
ggtacacaagatttttttgatgacgtcactcaaaGTGAGGAAAAACctaa
atttcctttgttcttataaaagctattgtattctaacaaaggctttagaa
aaagttTCTCTGAATCTAGACAGCTTGTTTTATCctcaatattcaataaa
ttacggtttaaacgatatatttgacataaaaaataaatttgtatcgG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00020936-exon-sc0000374-1491911889:62779..63150 | TCONS_00020936-exon-sc0000374-1491911889:62779..63150 | Clytia hemisphaerica | exon |
| TCONS_00020936-exon-sc0000374-1510915933:62779..63150 | TCONS_00020936-exon-sc0000374-1510915933:62779..63150 | Clytia hemisphaerica | exon |
| TCONS_00020936-exon-sc0000374-1575043694:62779..63150 | TCONS_00020936-exon-sc0000374-1575043694:62779..63150 | Clytia hemisphaerica | exon |
| TCONS_00020936-exon-sc0000374-1491911889:64091..64358 | TCONS_00020936-exon-sc0000374-1491911889:64091..64358 | Clytia hemisphaerica | exon |
| TCONS_00020936-exon-sc0000374-1510915933:64091..64358 | TCONS_00020936-exon-sc0000374-1510915933:64091..64358 | Clytia hemisphaerica | exon |
| TCONS_00020936-exon-sc0000374-1575043694:64091..64358 | TCONS_00020936-exon-sc0000374-1575043694:64091..64358 | Clytia hemisphaerica | exon |
| TCONS_00020936-exon-sc0000374-1491911889:65035..65175 | TCONS_00020936-exon-sc0000374-1491911889:65035..65175 | Clytia hemisphaerica | exon |
| TCONS_00020936-exon-sc0000374-1510915933:65035..65175 | TCONS_00020936-exon-sc0000374-1510915933:65035..65175 | Clytia hemisphaerica | exon |
| TCONS_00020936-exon-sc0000374-1575043694:65035..65175 | TCONS_00020936-exon-sc0000374-1575043694:65035..65175 | Clytia hemisphaerica | exon |
| TCONS_00020936-exon-sc0000374-1491911889:71638..71959 | TCONS_00020936-exon-sc0000374-1491911889:71638..71959 | Clytia hemisphaerica | exon |
| TCONS_00020936-exon-sc0000374-1510915933:71638..71959 | TCONS_00020936-exon-sc0000374-1510915933:71638..71959 | Clytia hemisphaerica | exon |
| TCONS_00020936-exon-sc0000374-1575043694:71638..71959 | TCONS_00020936-exon-sc0000374-1575043694:71638..71959 | Clytia hemisphaerica | exon |
| TCONS_00020936-exon-sc0000374-1491911889:72242..72925 | TCONS_00020936-exon-sc0000374-1491911889:72242..72925 | Clytia hemisphaerica | exon |
| TCONS_00020936-exon-sc0000374-1510915933:72242..72925 | TCONS_00020936-exon-sc0000374-1510915933:72242..72925 | Clytia hemisphaerica | exon |
| TCONS_00020936-exon-sc0000374-1575043694:72242..72925 | TCONS_00020936-exon-sc0000374-1575043694:72242..72925 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000374 | supercontig | sc0000374:62779..72925 + |
Blast
BLAST of TCONS_00020936 vs. Swiss-Prot (Human)
Match: BRAC (Brachyury protein OS=Homo sapiens GN=T PE=1 SV=1) HSP 1 Score: 286.189 bits (731), Expect = 3.652e-89 Identity = 152/260 (58.46%), Postives = 180/260 (69.23%), Query Frame = 2
Query: 290 IRVRLDEMGLWKSFHQLTNEMIVTKNGRRMFPVLKTSIQGLDPNAMYSIMLDFVPVDEHRWKFVNGEWSRGGKPEPTSSSRVYVHPDSPNFGAHWMKNSIVFSKVKLTNKENNNNQVVMLNSLHKYEPRMHVLKVGSKESERTVSTHSFEETVFIAVTAYQNEEITSLKIKYNPFAKAFLDAKERSE-QQIATHPRRFEFP--------------CIPP----PTVGGP-GAPCRCSLDGYPFHRHHPSSPPEYPRSFSY 1009
+RV L+E LW F +LTNEMIVTKNGRRMFPVLK ++ GLDPNAMYS +LDFV D HRWK+VNGEW GGKPEP + S VY+HPDSPNFGAHWMK + FSKVKLTNK N Q +MLNSLHKYEPR+H+++VG +R +++H F ET FIAVTAYQNEEIT+LKIKYNPFAKAFLDAKERS+ +++ P + P PP P GG P S D YP R H SSP YP +++
Sbjct: 42 LRVGLEESELWLRFKELTNEMIVTKNGRRMFPVLKVNVSGLDPNAMYSFLLDFVAADNHRWKYVNGEWVPGGKPEPQAPSCVYIHPDSPNFGAHWMKAPVSFSKVKLTNKLNGGGQ-IMLNSLHKYEPRIHIVRVGGP--QRMITSHCFPETQFIAVTAYQNEEITALKIKYNPFAKAFLDAKERSDHKEMMEEPGDSQQPGYSQWGWLLPGTSTLCPPANPHPQFGGALSLPSTHSCDRYPTLRSHRSSP--YPSPYAH 296
The following BLAST results are available for this feature:
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