TCONS_00020726 (transcript) - C. hemisphaerica

Overview
NameTCONS_00020726
Unique NameTCONS_00020726
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length599

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00020726 ID=TCONS_00020726|Name=TCONS_00020726|organism=Clytia hemisphaerica|type=transcript|length=599bp
catttttccaaaaaaacatctccaaaTCTTTTTCATCACAGCACAAACAA
AGACGACCCAAGAAACTTCAAAAGACATGCCAGctaTTGTCAAAGTCAAA
GTAATTGAAGGCAAAAATTTGCCAATAATGGATAGGGCAAGTGACTTGAC
AGATGCATTTGTTGAGCTAAGACTTGGAAATACCACTTACAAAACAGAGG
TTTGTCGTAAATCACTTAATCCAAGGTGGAATTCAGATTGGTTCAAATTT
GAGGTGGATGATGAAGAAATCCAGGAAGAATATTTGCAGATCAAAGTACT
TGATTATGATGTTTATTCATCGCATGATGCTATTGGAAAGGTCACAATCA
ATCTTGATACAAATATTGTTCAAAATGGAACAAAGGAGATGAGTGGTTAC
TACCCCATTTATGATACTCTACAcgGGATTCGGGGCTatgtaaaattgaa
aatcagaACTCAATTTTTCATTGATGCAAACAAATATCGACAAACATCAT
GTGGAATAAAATTCTTCTCTACAAACGGTGTACCTCATGGCTTCACAGCA
ATACAATTTCAAGGATTTGTTGAGGAGCTACTTGTTGATGATGATCCAG
Run BLAST on NCBI

protein sequence of TCONS_00020726-protein

>TCONS_00020726-protein ID=TCONS_00020726-protein|Name=TCONS_00020726-protein|organism=Clytia hemisphaerica|type=polypeptide|length=199bp
IFPKKHLQIFFITAQTKTTQETSKDMPAIVKVKVIEGKNLPIMDRASDLT
DAFVELRLGNTTYKTEVCRKSLNPRWNSDWFKFEVDDEEIQEEYLQIKVL
DYDVYSSHDAIGKVTINLDTNIVQNGTKEMSGYYPIYDTLHGIRGYVKLK
IRTQFFIDANKYRQTSCGIKFFSTNGVPHGFTAIQFQGFVEELLVDDDP
Run BLAST on NCBI

transcript from alignment at sc0000365:171264..188083+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00020726 ID=TCONS_00020726|Name=TCONS_00020726|organism=Clytia hemisphaerica|type=transcript|length=16820bp|location=Sequence derived from alignment at sc0000365:171264..188083+ (Clytia hemisphaerica)
catttttccaaaaaaacatctccaaaTCTTTTTCATCACAGCACAAACAA AGACGACCCAAGAAACTTCAAAAGACATGCCAGGTAACTTTTCAATTAAT AGAGAGTTACAAATCATTATGAGTCATAAAACAAGCAATTCTTATTTCCA GGAAAACTTCAGTCAGGCAGGCGAAGTCAATCGATGAATCGTATATCATC ACACACAGTCAGTTACATCAATTAtgacaaaaacattttgttccaGACGC CCGctctcgataggatcgatcatcggaaaggctcgatgacggatcgatat gtgatcgatggattacttaacgatccggataggagatcgatggaagattc agccattaaaaattcttgagtatcgatcctatCGTTGATcctatcgagct agtatttcaatcgagtataccgattcgttatcaatcgttaatcgatttgt tatcaatCGTAAATGGAGTATGAGTTggtagggtcgataagatcaaTAAA AGattgatgacgaatcgattaacgatcgatatGACGAATCGGTAAGAATC Ataagcttgaaaaaaaaatcttgagtatcgatcctctatcgatctcctaa cCGGATCGTTAATTATTCCATCGATCACATccatccgtcatcgagccgtt ccgatgatcgatcctatggCCTAATTGGACTTGAGTCCCGAGTGGGATTC GACTTTTCAGACAAGGGATTTTCGTCGATTTTGTACTTAACCATAAATCT TTCATGTCTAtaaactttttgggttttctttggaatcgATTCTCTTCCTC TTCTCTCCGTTATTATGCGTTTAAAATAAGTCCATTCTGATTTGCTGGAA CCCGATTTCAACGTCATTGTAACACGCCCGGAAAAGTACTATACCGattt gaatttttggaaatgattGTCCGTGTTTGTAATACTCTccggtacctaat agccgccccccctGCTGATTaacgtatttttcaaggaaggcAGAGTACTA TATGGGAGAGTAAATAcatagtgtattccgccttcttcagaaatattcga aaacgtatttttttaaagaaggcggaatacaatgttagggcagtaagtcc aaagtagtgtattctgccttctttagaaacattcgaaggggtatttttta aagaaggcggaatactatgttagggcagtaagtccatagttgtgtattct gccttctttagaaacattcgaaagcctatttttttaaagaaggcggaata ctatgttagggcagtaagtccatagtagtgtattctgccttctttagaaa cattcgaaggggaattttttaaagaaggcggaatactatgttaggacagt aagtccatagtagtgtattctgccttctttagaaacattcgaaagcctat ttttttaaagaaggcggaatactatgttagggcagtaagttcgtagtagt gtattccgccttctttagaaacattcgaaaagggttttttttaaagaagg cggaatactatgttaggacagtaagtccatagtagtgtattctgccttct ttagaaacattcgagagcctattttttaaagaaggcagaatactatgtta gggcagtaagtccatagtagtgtattctgccttctttagaaacattcgaa agcctatttttttaaagaagacagaatactatgttagggcagtaagttca tggtatagtagtgtattccgccttctttagaaacattcgaaggggtattt ttttaaagaaggcggaatactatgttagggcagtaagtccatagtagtgt attccgccttctttagaaacattcgaaggggtatttttttaaagaaggcg gaatactatgttagggcagtaagtccatagtagtgtattccgccttcttt agaaacattcgaaagggttttttttaaagaaggcggaatactatgttagg gcagaaagtccaaagtagtgtattccgccttctttagaaacattcgaagg agtatttttttaaagtagtatttttttaaagtaggCGGAATACActgttt ggatttttttttccaatataGTAtttcgccttctttagaaattttaaaat aaagaaaatcgggactaaaaatttctcgttGCTATATATAGTTTTAAttg agtcccgaatccaatatgttcgtaaagtaaatcgggactaaaagtttctc gttgctatatatacttttacttgagtcccgaattcaaccTTTTCCTAGAC CAAGTTGGGACCGTCCCGAATCAAACCTTTATATAGACAgattcgggacc gtcccgaaatttacattttcaagacaAGCTATAATTAGCCCGTATAAATA AAGATCTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAATCC AATATGTTCGTAAAgtaaatcgggactaaaagtttctcgttgctatatat acttttacttgagtcccgaattcaaccttttcgtagaccaattcgggacc gtcccgaatcaaacctttatatagacagattcgggaccgtcccgaaattt acattttcaagatAAGCTATAATTAGCTATAATTAAAGATCTGCCCCAca cttccctgattttcaaattcaagccgccgtatccatcttttcagtgactc agatattaaatatgtattatatatacttttccttgagtcccgaatccaat atgttcgtaaggtaaatcgggactaaaagtttctcgttactatatatact tttacttgagtcccgaatccaaCCTTTTTGTAGGCCAATTCGGGACCATC CCGAATCAAACCTTTATATAGACGgattcgggaccgtcccgaaacagaca ttttcaagacaagctataattaggccgtataaataaagatctgccccaca cttccctgattttcaaattcaagccgccgtatccatcttttcagtgactc agatattaaatatgtattatatataNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNttt tacttgagtcccgaatccaatatgttcgtaaggtaaatcgggactaaaag tttctcgttactatatatacttttacttgagtcccgaatccaaCCTTTCC GTAGGCCAATTCGGGACCATCCCGAATCAAACCTTTATATAGATGgattc gggaccgtcccgaatcggacattttcaagacaagctataattagcccgta taaataaagatctgccccacacttccctgattttcaaattcaagccgcCG TATCCATCTTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNacttgagtccc gaatccaatatgttcgtaaggtaaatcgggactaaaagtttctcgttact atatatacttttacttgagtcccgaattcaaccTTTCCGTAGGCCAAATC GGTAATTTTAATTGAGTCCCGAATCCAAACATTTCGTACGCAAaatcggg actcaagtaaaagtatatagtATAAATCAAACTATcgatcgatttttttt tttcatcgatttcgacTTCTTTACCACGTCGTTCTAGATCGGGACAGTCC CGAGCGGGACTCAAGTTAAATTAGGcggatcctatcgagcgcgggacGTC Tggtttgttcaaccaccttcacttcaagataggccaccatagaatgaact tccttttatattataggatgaaccatattcatgtggcttttaGCCTTGCA CTtcatcacagagcctatttgagatattttagtaaccagcccagagaaaa attttaaacctttatttgaatacatgcctttttaatactcaaatataaaa aaattaaaaaattttaacttggtcattacCCAAAAAAGTCATTGATTggc ctctgcgatggagtgcaaggctgaaagccacatgaatatggttcatcata taaaaggaagttcattctatggtggcctatcttgaagtgaaggtggttga acaaaatatttttggcatattgatgtcaGTCCGTCACAGAGTGCcataat ataaacaaaactcaacatccttacaaaagttgtcgttttgatttcccaaa catttgtctcaagcgttcacttccacaataatttatgtaattgcaatttc tgTCAGTCCACAACATAttataccgtaacttggtctaatgtcgacttCCC TCCTCtctaaattcgacacccttttctagagcgaaaaaattaaaaaaagg tcaatatttttttatttcagtgaggctggaactttgattattgaggatta cgattttaccagctttttagtgatttttgccCCCCTAACCCAAATcttgc aacctctttaccttaaggaagatcgaaattagagttttcagcgttccgaa aaaaacgcatagcaggaattttttcatcttcacaggatcgattctcaaca acaaaatacgtCTTTTGGTTTTTGGGTTCGTTtgtgacgtttttccttca aagaatattgatcactttccttttccccttgagcgggtgagaaaaaaatg attagctcgcgttcttgcgcgggcgaataaagatgagatAGTTTCCGCAC TATTTTGCGCTCACGATAGAATTGCCCAAACACGgggtatttcaaatgat aaactatgtcgttctgtaagtgttttttttctgagagatacaaatagtat attgaatattattaactcattttatttaagtatttttgagcgcaaattta aatattatggttaaataaaaaacaaatgatggcagttttgtttatttctc aaactcccgggaaaagttttttttgctgaattaagctattttacaaatct cggaaaagaactcccataggaattccgatacataacttgattggttaatt tcggaacggcttcaataAAGTCATAAtagcagataattttaaaagtttct gaggaaatatgtgtaatttatcgatgttgatggcttgttgactctttaaa gaaaaaagataacaggtatagctttttctaatcctggaatattgagATTC CAGCTACACTGTATTTTCTTAGTGTTAAGGGagaataaatcttttttcaa tcactgATTccgactttcatattattcctatctctaaagaagggtgtcga aattagaagacggatgtcgagattagaccaacttacggtaggcATGTTTT TATTCACGTGgacgaagtgcctactaaacaATCCGAGGGTAAGTAGCGAA GCAACATAGCAGATTAAAgcaaagaaatatcttttggcattaacaatcaa atataatatattacattatatttccttaattcaaaaatcaaaaattcatc cGTCCGTCCCATATCCTCCCAatcagtgtagctctaaagctctaaaacag catctaataacatgaaaaccagaatatgattcctCAGTgagaatcaaaac tataaagtgcacttacaaacatcaatttgtcagatccaacaaaattaata acgccACTGTCATCAtttacaataaaacaaacaattttctgtcaagagcc ttgtaaacattccaacaacttccatcgaaatgatctatcacagctcagtc taccatttttagtgcggtccgaggattgagccgagagcGCTCCGCAAGCT catgcgcgggtgaaaaacttaaatctgtcaatcattttctcaagtgaAGA GTACGCGAAACGATTTTAGCATTACCATAGTGCTGCGGagcatcaatgga tagtattcaattatcattaggACATGTTCAATTAAaaacgtcaaattttc aaggtttttgtgacatttttaagTCATGCTACAAAATTATCCATAACTTT TTAATACTATATGATATGGAAAATCAACCTAAATGATGGTTAAGTAGATA GACAGGGGGTGGATAATCTTGTGACAGTTTTTCTATACTCTTTACCTAAG TCAGGTAACGATTGAAAGAAGCTTGCCAAGCTTTGGATAATGATGTAACA TCTAAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNCCGGATAACGCTGTAACATGGGTCAAAGC TTGAAGACAGAGGGTTAAGTTATCCATTTTTTGGCAATAAATGTCATACA TGTTGTTAAAATAAGGATACCAATATTTCATTATTAAAACAAGTGTATGG TTTCTAATGTTTATTTCAAGTATACTTCATCGTCTTGGATAACATCGTAA CATCAAACAAGGTCATTTTCAAGATCCTTCCAAAGGGCCTATTAATTGAT GgtgaacatcaaaatctattaacATGTTTATTACTTCATATTTAAACCTG ATACCTTGTCTCAGTACAGGTGATGAGTTATACGTTTTAATACAAACTAT AGACACAACCTTGGAATTGATATAATTGACAATAAATGGAtaatttgtaa caaaattttagaaacactGATTTTGGTGACACTATTAAGATTAGCCAAAT CATCGCTATCTACTACTATCTACACATTGCTATCCATTCTTTTTATGTCG CGTCTTGGAAAAGAAACATACAAACGAAAATATATTTGACTCTTGTATCA ACATCTCATACCAGCTGATTCTGATTATATGATTTGTAACTATTTGGAAA AAACagttgaaatttttcgaaaaggaTTCGTCCAATACAAGGTACTTGAA AAGAAAATCGTTTATATAACATTAAACCATGTCTTGCAGTACCCAGAAGT TTCAATAGATGATATGAAAATGGAAATGACAACGTACCAGCTTTTGTCAG AAATTGGATTATCAATGACAGGTCGttgaatagattttattttagtttaa acTCGTTTGCAAACCTTGCCAGTAAATATTTCCTAATTTATTATACCata ttcagaaaaaaattatttctcggCCTTTATGATTCGATGATTAtccaaaa tgagaaaataactaTAACAAATATAGACCTTAGAGTGGATAAAATATTAT GGAGTTTCTACTATTTGCCATATATAGTTTCATATAATATACCTTTAATA AGTTCAATAAAGAGTTattttcagcgattttaaggctgtgCTATCAGAGC ACTGCTACATGTTACGATTTATCCAAGTACTGTCTATTAACTAAGGATGA AGTATACTTACATAAGCTGACTAATATTTCTTTACTCCATTGCTTTAAAA CCAATGCAATAAAGTAAAATATAGATGCCTATATCCTTGTGGGTCACATA TTGTACTTTTTTACAATATTATCCATAGAGCGTGAAATAATGAATTTATG ATCAAAAAAGAGAATTTAACATTAAATTGATGATTTTGGTTGtactatat tcaatttttagctcTTAGTAATGTTCCTAacttattttatcaacattcaC CTATTTAACACATGTGTTACTTATTATCCAATATATAGTTAACCCTTTGT GTAATCTTTTGCGAATAACAACAGTTGCTAGGCAACATCTTATTCTTCAG TATAGAATAGGTTGggttttgaaaaagtcaaaatttttattgccTGCTTG CTGTGGATAAAAAAGTTACATTATTATCCAGATCTTGTTATATAATGAAA ACATCATTATTTTGCAAGCTTTTAAGAGACATTGTTACGGAATTATCCAC AAAATTTCATTACTTAGATCCCACAAAATCATGACTTATTaacaaaaaag tgatttttatcattttttaaggTGTCACAAAACTTGACGTTTTTAATGAA CATGtccattatccctttattttcattcctagaacttttgcaaaaagaag gaaaaatagaaaagttgtattttttactgctctattcacatatatactca atttgaaagatcttctatgtggcgtttttttgcaaacttcaaaaaactga tttttgtcccgcctttgccggactttggcttaagtgcttgagtgcagcat agtgtacaaagtccaaacatgcgattcccataatttttgtatgaagagtt aggtctatactgccaatcatcttaaattcactttaatagaccttttttta aagaattttcagCGGGCATTTTTCTAGCGCTTCGTtgatcgcgcaatttt tgcatCACACCAACTTTCTCAGCCagtcgtaataattatgcattgtcaaa tttggttctccattgtcaagtcaagATCAATGGTGACATCACCTaagcat aagaaaaaagaatttcatcagttttatgcatatattaatttgcgagatat tctattcgccacGCCAGCACACTTTTCGTACATTAGTCGGAATACCTTTA CTcgtgggattgatggtaacttttcatcttcgttattttttaaatgaagc acAGCCAAAAAAAACGAAGCTTCAAAAAGTTGCGTTTTCCCAGTGAGTAA Acaattctgacaattaacaaaattgatcatgatgatttttttcggtcagg caaatgtctcgtattgggggttttagtcttgacccctaagcctattgaag cgtttgggtaaactagacaaaacttgaaaaaaagctggtgttttgaagca tTTCCGTGCAATCGGAATATCACTCTTTGTGGCGGACTGATTATAGATAA CTTTTAACCAGACTGACTCTCCCATTCTCCCTCATTCTGGGTTTCTTGTT AccagatgctgttttagagttttagagctagcctgcctATTAAACTCTTT TGTGTTTGCcgcaagaaagaaaaatattatttgaccCTAGGATCAGATTT ACAGACCGGTAaaatttttagtaaaaaaaaatcaggtTTGAGGTTATAAA GAAATCAAAGGTATTCTTTTTTGTGAATTGCAATATTTGTTTTACTACCA AACCAACCACACTATACTAATTGAGCTGTCAAAAATATATTCGTGTATGA ATTGCATGACAATTTGCTcgcataatcccattggttcGCGCTACGATATC ATTACATCCTATTTCATTGTTTGCGCGATCGAGCGAACCACATCGCACGA GTGGGCAAAGAATAGGTGGTACGTCTAAAGCACGGCACGGACCTAGCACC aagtggagcttttaatttctttttaaataaaggtcattagtCAAAAGAAC ACATACATGCACTGGTACAACCAAGTACGGACTTTGTGacgggaaaactt tgatgaaaaaatggcGACAACTTTGGGTATACATCGCTTGACGTTATCTT TGGGGGTGGGGGGTGTTCAGAGGATAACGTAAATTTGACGttatgcgttg tcaaatgaatatggtaTGGGGATGGGTCCCCTAAAGAaatatgatcaatt atgtacaaaaattgcctgtcCTTAAATCTTGAGTTCTGTTTCTtgaatat actgcaattgcggtgtatgaaaaatgtaaaagtgacgtttttaccgcaat tgcagtaagaCTATTCGATTAGCCTTTGATTACTTCGACGAACTTGATCG GGGTGAAAAGTCGGCAGTAAAAAAGTCGGCAGTAAAAAAGTCGGCTGTAA AAAAGTCGGCGGTAAGTGACCGATATGAGCAGGGTGGTGACAAAAATCTT TTGGCCAAGTGACTAAATTTGATGGCCTAATTGGACTTGAGTCCCGAGTG GGATTCGACTTTTCAGACAAGGGATTTTCGTCGAATTTTTACTTAACCAT AAATCATTCATGTCTATACCTTTTTgggttttctttggaatcgATTCTCT TCATCCTCTTCTCTCCGTTATTATGCGTTTAAAATAAGTCCATTCTAATT TGCCGGAACCCGATTTCAACGTCATTGTAACACGCCCGGAAAAGTACTTT ACCGatttgaatttttggaaatgattGTCCGTGTTTGTAATACTctctaa tagccgtccccccgctGATTAACGTATTTTTCAAAGAAGGCAGAGTACTA TATGGGAGAGTAAATACATAGTGTATTCCGCCTACTTCAGAAATATtcga aaacgtatttttttaaagaaggcggaatactatgttagggcagtaagtcc aaagtagtgtattctgccttctttagaaacatttgaaagcctattttttt aaagaaggcggaatactatgttacgttagggcagtaagtccaaagtagtg tattccgccttctctagaaacattcgaaggggtatttttttaaagaaggc ggaatactaatgttagggcagtaagtccatagtagtattccgccttcttt agaaacattcaaaggggtatttttttaaagaaggcggaatactatgttac gttagggcagtaagtccaacgtagtgtattccgccttctctagaaacatt cgaaggggtatttttttaaagaaggcggaatactatgttagggcagaaAA TCCAAAGTAATGTATTCCGCCATCTTGTGAAACATTCGAAAGGGTTTTTT ttaagaaggcggaatactatgttagggcagtaagtccatatagtgtattc tgccttctttagaaacatttgaaagcctattttttttaaaaaggtggaat actatgttagggcagtaagtttacagtatagtagtgtattccgccttctt tagaaacattcgaaggggtatttttttaaagaaggcggtatactatgtta gggcagtaagtccatagtagtgtattccgccttctttagaaacattcaaa ggggtatttttttaaagaaggcagaatactatgttagggcagaaAATCCA AAGTAATGTATTCCGCCATCTTTAGAAACATTAGaaagtgtattttttta aagaaggcggaacaCGCTGTTTGGATTTTTTGTTCTAATATAGTATTTTG CCttctttcgaaattttgaaataaggaaaatcgggactaaaaatttctcg ttGCCATATATAGTTTTAAttgagtcccgaatccaatATGTTTGTAAAgt aaatcgggactaaaaatttctcgttGCTATATATAGTTTTAAttgagtcc cgaatccaatATGTTCGTAAAGTTAATCgggactaaaagtttctcgttgc tatatatacttttacttgagtcccgaattcaaccttttcgtagaccgatt cgggaccgtcccgaatcGAACCTTTATATAGACAGATTCGGGACTGTCCC GAAAGTTACATTTTGAAGACAAGCTATAATTAGCCCCTATAAATAAAGAT CTGCCCCAcacttccctgattttcaaattcaagccgccgtatccatcttt tcagtgactcagatagtaaatatgtattatatatacttttacttgagtcc cgaattcaaccttttcgtagaccaattcgggaccgtcccgaatcGAACCT TTATATAGACAGATTCGGGACTGTCCCGAAAGTTACATTTTGAAGACAAG CTATAATTAGCCCCTATAAATAAAGATCTGCCCCACACTTCCCtgatttt taaattcaagccgccatatccatcttttcagtgactcagatagtaaatat gtattatatatacttttacttgagtcccgaatccaaCCTTTTTGTAGGCC AATTCGGGACTGTCCCGAATGCAACATTTTCGTAGGCCGATTCGGGACTG TCCCGAAAAGtataatttaaaaaagtgttATAATTAGCCCGTATCTATAA AGATCTGCACCAcacttccctgattttcaaattcaagccgccatatccat cttttcagtgactcagatattaaatatgtattatatatacttttacttga gtcccgaatccaatatgtttgtaaggtaaatcgggactaaaagtttctcg ttgccatatatacttttacttgagtcccgaattcaaccTTTTCGTAAACC AATTCGGGACCATCCCGAATCAAACCTTTATATAGACGGATTCGGGATCG TCCCGAAACGTACATTTTCAAGACAAGCTATAATTAGCCCGTATAAATAA AGATCTGCCCCAcacttccctgattttcaaattcaagccgcCATATCCAT CTTTTCAGTGACTCACATATtaaatatgtattatatatacttttacttga gtcccgactCCAATATATTCGTAAggtaaatcgggactaaaagtttctcg ttactatatatacttttacttgagtcccgaattcaaccATTTCGTAGGCC AAATCGGGAATTTTAATTTAGTCCCGAATCCAAACATTTTGTAGGCAAaa tcgggactcaagtaaaagtatacagtataaatcaaaccatcgatcaattt ttttttcatcaatttcgaCTTCTTTACCAAGTCGTTCTACTGTAGATCGG GACAGTCCAATTTGATTCCGGCATTTGTGCAAAAACCACGCACAGGCGTT CCGAATGGGAAATTAAGTAGATTTATTTCCCATCGAAGTGTTTCAACTCT TGGAGATTTTAAAGTAAATGGAAATCAGGTTTGTGGTTGCCGCTGGCGGC GCATTTAAGAAAACGAATTAATcaaactttattcaaagtcatCAAACTAT AATCGAACAGTAATTGAATATTAATCGAACCTTAATCGAACGCTTATCGA ACaataatcgaactaatcgaagaCTTATCAAATTCATCAAACTAGTGGAA TTTTCCaagatttttctgatttctatTTGTTCGATTAGCGTTTGATTAAT TTGATTAATTGAATCCTAATATTTCAATTAACCTTGATTAAatttgatta gttcgataatCAAATTGCATGTGGTATataattttttcattatattaGGG CAGCATTCTGTTTGGTGGCTATCTAATTTTCCAATTAGCCTCAgccattt tgaagaaaaacaaaaaagagcGCGCTAACAGTGAAATTCCATTTGTCGTT GTCTCTGTTAGAGTATTTTTGGCTGCATCTTCCAACTGCATGATATACTA GTACCTACCAATTAATTAATGCTACTTACCAAAAAAATGGAATAACTGAG AGCAGACTAAAATGTATAACTCTTTGACATTgcaaacttgtttttttttc agctaTTGTCAAAGTCAAAGTAATTGAAGGCAAAAATTTGCCAATAATGG ATAGGGCAAGTGACTTGACAGATGCATTTGTTGAGGTATGTTATTTTCCA TTCATATTGATATTATGTTGCGTTGTTCAAAAATCTTATCCTTGGAGAGC GCTCAATCattcaaaagctcaaaaaccttttttgctTTGACTTTTTACAA CAATATCTGATTACATTTCTTTTCCCAGCTTGTCCTTGTTTAGAAAAATT CATTCTTTCAATAAGAATCACCCAATGCAAAATTACAAAGACTTCTGAAT CAATTTAGGTCCTCAGGAAATCAAGGTGTCACAAGCCGTTCTGGTGAAAA ACAACCTTATCAGTTTTTAGACAAAATTAGCAACATCATTTTACGATCAA CTAATTGCACTGAATTATATTTTCATACAGCTAAGACTTGGAAATACCAC TTACAAAACAGAGGTTTGTCGTAAATCACTTAATCCAAGGTGGAATTCAG ATTGGTTCAAATTTGAGGTATATATGGTTTAATTTTATTCTTCATAAAAC ATAGATCTTTACTGGGAATcatcaaaaaaatgtaaactttGTCAAGTTAA GTTCAGGTTCATTCAACCTTTTattggcccagctagctttagcgtactgg cctttcattagcattctgcccggtgtcagtgtgtaacaatttactaggcg atacgTGTTTTCAAGCACAGCACAGGCTAGTACATATTGtgaaggatttg attggctgttagaacatgattgacagaataaaaaacaattgaaatcgtCT TTATTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtagg aagatgttcttttaaaaaaagttgtttttacatttctctatcatgtgaac agttcagttgttcacgtgttaggaaaaaaacTAACATCTCTGTATATAAT ATTATGAAGTATTTCTCATTGTTGTAAATAAGAgatagccgaatggtcta aggTGTCTATATGGCTTATATGAGCAACTCCAGGTTCAACTCCCCTCTGC TActcaagtcttgttcagttcatatttttattcgctgggccttcatgccc tctgggcttcttgttttgatttaaaatgttCAATGATTTTATCACATTTT TGATTTCTCATTGTGAAACATACTCACCAATAACCTacataatatttctt tttttacactAGGTGGATGATGAAGAAATCCAGGAAGAATATTTGCAGAT CAAGTATAAATTAATCTTTCACTTCATGTTTTCTCCTTACATCTGGTATG CCCAAAATGGATttttaaaataacaaaatgagaatcataataaaagtttt tatcaCAACTATAGAATGGGATTGAACACAGTACTAAGAATAGAAAACAG TTGTAAAGAACACAGAATTAAGAAAGCTAACTCAGCCGTTCTATTTTAAA CTACTATTTTCTTTCAGAGTACTTGATTATGATGTTTATTCATCGCATGA TGCTATTGGAAAGGTATACACCCTTAAAATTATGTAATCAAGGGACGGTT TAAGTGCATGTTGATCATTTTAAAGCATTCCTTAGAATTATTTTTGATAT CcattatttttgatttgtttttctcTTAGATCTTAGATTTTACTGGAAGC TTTAAATTGTATATATCGATATCAAactcttttaaaattgttcttataaa aacgtgcgTGTGTTAATTAATCAATTAATTTATTAACACATTGTGCTTCT TATTCTAGGTCACAATCAATCTTGATACAAATATTGTTCAAAATGGAACA AAGGAGATGAGTGGTTACTACCCCATTTATGATACTCTACAcggtaaaaa aattaattatgcgCTAAGGTTTTTTATCAGTGATAGTTAATTTTTTCGCT gaacatcatttttttcttcataaaagaATAGAGATAtcttaattaaaaaa tcaaaatttatttcatagtAAAAAGCTTTTCGGCTACGCCATCGTCAACG TACATAGAAtggtaaaaaatcacaaattttctatcaaaatatttgaaaaa actgCCTAATTAtctacaaataaaaaaattcattcataaAAGCGCTATAC AAAGGATTCGATAAAAATGTGAAAGCATATAAAAATTATTCTTTAGGGTA TATCCAAGTAATGCCATTTCTGAACAGTTGTAATTGTTTTGTTTCTAGTT GATTGTTAAGTGACGGTCCCATGGTAGCTATAAACGAAGCTTCTAGAAAC TTCTTTCCTTATCAAATATGGGATCTTTTAAGATACATCTCCAATAAAAT TGATGGATGGGGTTTTCTTTTAAATGCTTTTTACTCTGTTAATTAATGAA TTTATAATTAATAATTGGCAATTAACTTTCAATGACTTCCCTGACTTCTG ATATTAtatctttttttcattattaNTTTCAAAAGGTATTGCGCACTGGA AAGGACTAGACCATCTTCTGATTTATCTTTTCATGATCTTTGTTTTAGGG ATTCGGGGCTatgtaaaattgaaaatcagaACTCAATTTTTCATTGATGC AAACAAATATCGACAAACATCATGTGGAATAAAATTCTTCTCTAGTAAGT GAAtgtaaaaatatattaaaatattcTGTTATTCTTTATTAACGGGTAAT TCtcgttttgattttaaatctgTATTGTTAAGAATACTTTGATAAACTTA CATAAATATCCGAAATAGACGACAGAATTGGAGTAGTGACGCTTATAGTT GTCAGGCAAATGTTAGATTGCCACTGGAAGCCATTTACTTTGCAATTGAA CGAAGCCACCCATACCCTGTGAGGGAAACTGGGTAGTCAGTCAAAGGTGC TGActgggcgctcattgaaagtgTCTATATTTAAagatgacattattttt tcattatattaATGTTTAAAGAGAGTAAAAACAAAGACTAAGATGTTGGT TGTTTATGATTATATTCATTTGATGTTCTCTCTTTCATGTAGCAAACGGT GTACCTCATGGCTTCACAGCAATACAATTTCAAGGATTTGTTGAGGAGCT ACTTGTTGATGATGATCCAG

Coding sequence (CDS) from alignment at sc0000365:171264..188083+

>TCONS_00020726 ID=TCONS_00020726|Name=TCONS_00020726|organism=Clytia hemisphaerica|type=CDS|length=4776bp|location=Sequence derived from alignment at sc0000365:171264..188083+ (Clytia hemisphaerica)
atttttccaaaaaaacatctccaaaTCTTTTTCATCACAGCACAAACAAA
GACGACCCAAGAAACTTCAAAAGACATGCCAGctaTTGTCAAAGTCAAAG
TAATTGAAGGCAAAAATTTGCCAATAATGGATAGGGCAAGTGACTTGACA
GATGCATTTGTTGAGCTAAGACTTGGAAATACCACTTACAAAACAGAGGT
TTGTCGTAAATCACTTAATCCAAGGTGGAATTCAGATTGGTTCAAATTTG
AGGTGGATGATGAAGAAATCCAGGAAGAATATTTGCAGATCAAAGTACTT
GATTATGATGTTTATTCATCGCATGATGCTATTGGAAAGGTCACAATCAA
TCTTGATACAAATATTGTTCAAAATGGAACAAAGGAGATGAGTGGTTACT
ACCCCATTTATGATACTCTACAcgGGATTCGGGGCTatgtaaaattgaaa
atcagaACTCAATTTTTCATTGATGCAAACAAATATCGACAAACATCATG
TGGAATAAAATTCTTCTCTACAAACGGTGTACCTCATGGCTTCACAGCAA
TACAATTTCAAGGATTTGTTGAGGAGCTACTTGTTGATGATGATCCAatt
tttccaaaaaaacatctccaaaTCTTTTTCATCACAGCACAAACAAAGAC
GACCCAAGAAACTTCAAAAGACATGCCAGctaTTGTCAAAGTCAAAGTAA
TTGAAGGCAAAAATTTGCCAATAATGGATAGGGCAAGTGACTTGACAGAT
GCATTTGTTGAGCTAAGACTTGGAAATACCACTTACAAAACAGAGGTTTG
TCGTAAATCACTTAATCCAAGGTGGAATTCAGATTGGTTCAAATTTGAGG
TGGATGATGAAGAAATCCAGGAAGAATATTTGCAGATCAAAGTACTTGAT
TATGATGTTTATTCATCGCATGATGCTATTGGAAAGGTCACAATCAATCT
TGATACAAATATTGTTCAAAATGGAACAAAGGAGATGAGTGGTTACTACC
CCATTTATGATACTCTACAcgGGATTCGGGGCTatgtaaaattgaaaatc
agaACTCAATTTTTCATTGATGCAAACAAATATCGACAAACATCATGTGG
AATAAAATTCTTCTCTACAAACGGTGTACCTCATGGCTTCACAGCAATAC
AATTTCAAGGATTTGTTGAGGAGCTACTTGTTGATGATGATCCAattttt
ccaaaaaaacatctccaaaTCTTTTTCATCACAGCACAAACAAAGACGAC
CCAAGAAACTTCAAAAGACATGCCAGctaTTGTCAAAGTCAAAGTAATTG
AAGGCAAAAATTTGCCAATAATGGATAGGGCAAGTGACTTGACAGATGCA
TTTGTTGAGCTAAGACTTGGAAATACCACTTACAAAACAGAGGTTTGTCG
TAAATCACTTAATCCAAGGTGGAATTCAGATTGGTTCAAATTTGAGGTGG
ATGATGAAGAAATCCAGGAAGAATATTTGCAGATCAAAGTACTTGATTAT
GATGTTTATTCATCGCATGATGCTATTGGAAAGGTCACAATCAATCTTGA
TACAAATATTGTTCAAAATGGAACAAAGGAGATGAGTGGTTACTACCCCA
TTTATGATACTCTACAcgGGATTCGGGGCTatgtaaaattgaaaatcaga
ACTCAATTTTTCATTGATGCAAACAAATATCGACAAACATCATGTGGAAT
AAAATTCTTCTCTACAAACGGTGTACCTCATGGCTTCACAGCAATACAAT
TTCAAGGATTTGTTGAGGAGCTACTTGTTGATGATGATCCAatttttcca
aaaaaacatctccaaaTCTTTTTCATCACAGCACAAACAAAGACGACCCA
AGAAACTTCAAAAGACATGCCAGctaTTGTCAAAGTCAAAGTAATTGAAG
GCAAAAATTTGCCAATAATGGATAGGGCAAGTGACTTGACAGATGCATTT
GTTGAGCTAAGACTTGGAAATACCACTTACAAAACAGAGGTTTGTCGTAA
ATCACTTAATCCAAGGTGGAATTCAGATTGGTTCAAATTTGAGGTGGATG
ATGAAGAAATCCAGGAAGAATATTTGCAGATCAAAGTACTTGATTATGAT
GTTTATTCATCGCATGATGCTATTGGAAAGGTCACAATCAATCTTGATAC
AAATATTGTTCAAAATGGAACAAAGGAGATGAGTGGTTACTACCCCATTT
ATGATACTCTACAcgGGATTCGGGGCTatgtaaaattgaaaatcagaACT
CAATTTTTCATTGATGCAAACAAATATCGACAAACATCATGTGGAATAAA
ATTCTTCTCTACAAACGGTGTACCTCATGGCTTCACAGCAATACAATTTC
AAGGATTTGTTGAGGAGCTACTTGTTGATGATGATCCAatttttccaaaa
aaacatctccaaaTCTTTTTCATCACAGCACAAACAAAGACGACCCAAGA
AACTTCAAAAGACATGCCAGctaTTGTCAAAGTCAAAGTAATTGAAGGCA
AAAATTTGCCAATAATGGATAGGGCAAGTGACTTGACAGATGCATTTGTT
GAGCTAAGACTTGGAAATACCACTTACAAAACAGAGGTTTGTCGTAAATC
ACTTAATCCAAGGTGGAATTCAGATTGGTTCAAATTTGAGGTGGATGATG
AAGAAATCCAGGAAGAATATTTGCAGATCAAAGTACTTGATTATGATGTT
TATTCATCGCATGATGCTATTGGAAAGGTCACAATCAATCTTGATACAAA
TATTGTTCAAAATGGAACAAAGGAGATGAGTGGTTACTACCCCATTTATG
ATACTCTACAcgGGATTCGGGGCTatgtaaaattgaaaatcagaACTCAA
TTTTTCATTGATGCAAACAAATATCGACAAACATCATGTGGAATAAAATT
CTTCTCTACAAACGGTGTACCTCATGGCTTCACAGCAATACAATTTCAAG
GATTTGTTGAGGAGCTACTTGTTGATGATGATCCAatttttccaaaaaaa
catctccaaaTCTTTTTCATCACAGCACAAACAAAGACGACCCAAGAAAC
TTCAAAAGACATGCCAGctaTTGTCAAAGTCAAAGTAATTGAAGGCAAAA
ATTTGCCAATAATGGATAGGGCAAGTGACTTGACAGATGCATTTGTTGAG
CTAAGACTTGGAAATACCACTTACAAAACAGAGGTTTGTCGTAAATCACT
TAATCCAAGGTGGAATTCAGATTGGTTCAAATTTGAGGTGGATGATGAAG
AAATCCAGGAAGAATATTTGCAGATCAAAGTACTTGATTATGATGTTTAT
TCATCGCATGATGCTATTGGAAAGGTCACAATCAATCTTGATACAAATAT
TGTTCAAAATGGAACAAAGGAGATGAGTGGTTACTACCCCATTTATGATA
CTCTACAcgGGATTCGGGGCTatgtaaaattgaaaatcagaACTCAATTT
TTCATTGATGCAAACAAATATCGACAAACATCATGTGGAATAAAATTCTT
CTCTACAAACGGTGTACCTCATGGCTTCACAGCAATACAATTTCAAGGAT
TTGTTGAGGAGCTACTTGTTGATGATGATCCAatttttccaaaaaaacat
ctccaaaTCTTTTTCATCACAGCACAAACAAAGACGACCCAAGAAACTTC
AAAAGACATGCCAGctaTTGTCAAAGTCAAAGTAATTGAAGGCAAAAATT
TGCCAATAATGGATAGGGCAAGTGACTTGACAGATGCATTTGTTGAGCTA
AGACTTGGAAATACCACTTACAAAACAGAGGTTTGTCGTAAATCACTTAA
TCCAAGGTGGAATTCAGATTGGTTCAAATTTGAGGTGGATGATGAAGAAA
TCCAGGAAGAATATTTGCAGATCAAAGTACTTGATTATGATGTTTATTCA
TCGCATGATGCTATTGGAAAGGTCACAATCAATCTTGATACAAATATTGT
TCAAAATGGAACAAAGGAGATGAGTGGTTACTACCCCATTTATGATACTC
TACAcgGGATTCGGGGCTatgtaaaattgaaaatcagaACTCAATTTTTC
ATTGATGCAAACAAATATCGACAAACATCATGTGGAATAAAATTCTTCTC
TACAAACGGTGTACCTCATGGCTTCACAGCAATACAATTTCAAGGATTTG
TTGAGGAGCTACTTGTTGATGATGATCCAatttttccaaaaaaacatctc
caaaTCTTTTTCATCACAGCACAAACAAAGACGACCCAAGAAACTTCAAA
AGACATGCCAGctaTTGTCAAAGTCAAAGTAATTGAAGGCAAAAATTTGC
CAATAATGGATAGGGCAAGTGACTTGACAGATGCATTTGTTGAGCTAAGA
CTTGGAAATACCACTTACAAAACAGAGGTTTGTCGTAAATCACTTAATCC
AAGGTGGAATTCAGATTGGTTCAAATTTGAGGTGGATGATGAAGAAATCC
AGGAAGAATATTTGCAGATCAAAGTACTTGATTATGATGTTTATTCATCG
CATGATGCTATTGGAAAGGTCACAATCAATCTTGATACAAATATTGTTCA
AAATGGAACAAAGGAGATGAGTGGTTACTACCCCATTTATGATACTCTAC
AcgGGATTCGGGGCTatgtaaaattgaaaatcagaACTCAATTTTTCATT
GATGCAAACAAATATCGACAAACATCATGTGGAATAAAATTCTTCTCTAC
AAACGGTGTACCTCATGGCTTCACAGCAATACAATTTCAAGGATTTGTTG
AGGAGCTACTTGTTGATGATGATCCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_011627XLOC_011627Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00020726-exon-sc0000365-1491911889:171264..171346TCONS_00020726-exon-sc0000365-1491911889:171264..171346Clytia hemisphaericaexon
TCONS_00020726-exon-sc0000365-1510915933:171264..171346TCONS_00020726-exon-sc0000365-1510915933:171264..171346Clytia hemisphaericaexon
TCONS_00020726-exon-sc0000365-1575043694:171264..171346TCONS_00020726-exon-sc0000365-1575043694:171264..171346Clytia hemisphaericaexon
TCONS_00020726-exon-sc0000365-1491911889:184816..184898TCONS_00020726-exon-sc0000365-1491911889:184816..184898Clytia hemisphaericaexon
TCONS_00020726-exon-sc0000365-1510915933:184816..184898TCONS_00020726-exon-sc0000365-1510915933:184816..184898Clytia hemisphaericaexon
TCONS_00020726-exon-sc0000365-1575043694:184816..184898TCONS_00020726-exon-sc0000365-1575043694:184816..184898Clytia hemisphaericaexon
TCONS_00020726-exon-sc0000365-1491911889:185244..185330TCONS_00020726-exon-sc0000365-1491911889:185244..185330Clytia hemisphaericaexon
TCONS_00020726-exon-sc0000365-1510915933:185244..185330TCONS_00020726-exon-sc0000365-1510915933:185244..185330Clytia hemisphaericaexon
TCONS_00020726-exon-sc0000365-1575043694:185244..185330TCONS_00020726-exon-sc0000365-1575043694:185244..185330Clytia hemisphaericaexon
TCONS_00020726-exon-sc0000365-1491911889:186226..186266TCONS_00020726-exon-sc0000365-1491911889:186226..186266Clytia hemisphaericaexon
TCONS_00020726-exon-sc0000365-1510915933:186226..186266TCONS_00020726-exon-sc0000365-1510915933:186226..186266Clytia hemisphaericaexon
TCONS_00020726-exon-sc0000365-1575043694:186226..186266TCONS_00020726-exon-sc0000365-1575043694:186226..186266Clytia hemisphaericaexon
TCONS_00020726-exon-sc0000365-1491911889:186481..186526TCONS_00020726-exon-sc0000365-1491911889:186481..186526Clytia hemisphaericaexon
TCONS_00020726-exon-sc0000365-1510915933:186481..186526TCONS_00020726-exon-sc0000365-1510915933:186481..186526Clytia hemisphaericaexon
TCONS_00020726-exon-sc0000365-1575043694:186481..186526TCONS_00020726-exon-sc0000365-1575043694:186481..186526Clytia hemisphaericaexon
TCONS_00020726-exon-sc0000365-1491911889:186772..186856TCONS_00020726-exon-sc0000365-1491911889:186772..186856Clytia hemisphaericaexon
TCONS_00020726-exon-sc0000365-1510915933:186772..186856TCONS_00020726-exon-sc0000365-1510915933:186772..186856Clytia hemisphaericaexon
TCONS_00020726-exon-sc0000365-1575043694:186772..186856TCONS_00020726-exon-sc0000365-1575043694:186772..186856Clytia hemisphaericaexon
TCONS_00020726-exon-sc0000365-1491911889:187512..187607TCONS_00020726-exon-sc0000365-1491911889:187512..187607Clytia hemisphaericaexon
TCONS_00020726-exon-sc0000365-1510915933:187512..187607TCONS_00020726-exon-sc0000365-1510915933:187512..187607Clytia hemisphaericaexon
TCONS_00020726-exon-sc0000365-1575043694:187512..187607TCONS_00020726-exon-sc0000365-1575043694:187512..187607Clytia hemisphaericaexon
TCONS_00020726-exon-sc0000365-1491911889:188006..188083TCONS_00020726-exon-sc0000365-1491911889:188006..188083Clytia hemisphaericaexon
TCONS_00020726-exon-sc0000365-1510915933:188006..188083TCONS_00020726-exon-sc0000365-1510915933:188006..188083Clytia hemisphaericaexon
TCONS_00020726-exon-sc0000365-1575043694:188006..188083TCONS_00020726-exon-sc0000365-1575043694:188006..188083Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00020726-proteinTCONS_00020726-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000365supercontigsc0000365:171264..188083 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.36649 3.99189 1.75099 2.82152 4.04831 2.61739 6.4325 5.80304 3.83287 4.74763 3.22572 5.14969 3.63002 3.07868 1.75627 2.88255 3.07304 4.26968 0.193403 2.63097 2.37475 2.44534 5.42374 6.63785 5.9578 7.93221 4.61523 1.73058 4.34162 5.04065
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001565Synaptotagmin
IPR000008C2_dom
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane
Blast
BLAST of TCONS_00020726 vs. Swiss-Prot (Human)
Match: C2CD5 (C2 domain-containing protein 5 OS=Homo sapiens GN=C2CD5 PE=1 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 1.781e-69
Identity = 99/174 (56.90%), Postives = 138/174 (79.31%), Query Frame = 2
Query:   77 MPAIVKVKVIEGKNLPIMDRASDLTDAFVELRLGNTTYKTEVCRKSLNPRWNSDWFKFEVDDEEIQEEYLQIKVLDYDVYSSHDAIGKVTINLDTNIVQNGTKEMSGYYPIYDTLHGIRGYVKLKIRTQFFIDANKYRQTSCGIKFFSTNGVPHGFTAIQFQGFVEELLVDDDP 598
            MP  +KVK++ G++LP+MDRASDLTDAFVE++ GNTT+KT+V  KSLNP+WNS+WFKFEVDDE++Q+E LQI VLD+D YS++DAIGKV I++D  +       +SG++PIYDT+HGIRG + + ++   F D N++RQ+SCG+KFF T  +P  + A+   GFVEEL+V++DP
Sbjct:    1 MPGKLKVKIVAGRHLPVMDRASDLTDAFVEVKFGNTTFKTDVYLKSLNPQWNSEWFKFEVDDEDLQDEPLQITVLDHDTYSANDAIGKVYIDIDPLLYSEAATVISGWFPIYDTIHGIRGEINVVVKVDLFNDLNRFRQSSCGVKFFCTTSIPKCYRAVIIHGFVEELVVNEDP 174          
The following BLAST results are available for this feature:
BLAST of TCONS_00020726 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
C2CD51.781e-6956.90C2 domain-containing protein 5 OS=Homo sapiens GN=... [more]
back to top