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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00020699 ID=TCONS_00020699|Name=TCONS_00020699|organism=Clytia hemisphaerica|type=transcript|length=823bp
AATGAATTAGATTAATATTTCGTCGATTAAACAAATTTAATACGGCACTA
TGtacgaaaaatataaaaaaatataaaaaaaggttagaaaattatctaaa
aacTAAACACATTAACAGGAATCCTGTAGaataatataaaattaaaatcc
taaaaatcttaATACCACAAATATTAAAGGGAAAGATAATATTTTAAATA
GGTGCTCATGCATAGAAATAAGTCAATTTTGTTACTAACGTCATACCATC
CAGCTCACTCAACTcgacaaagaaaacaaaaaaaaaaaaattccaagata
tttttttgaaaacattgaatCTTGAATTAAGAGAATTTTAGGAAATTGAT
ATCTGTAGGAGGGGGGGGGCTCAAAACATTTATTTACATGTTGAGTTGAA
TTCAAAAGTACAGTACAGTTTGTGATCTTTGACGAATCGAGAAAAGCttt
gaataaaattcaaatatctaaaaaaaaatttcttaaaatgaaatacacgc
attttttttatatgaaaaactTCTATAGATATATTAAGGTGAGATTTCAG
AGTTAGACTaagcctattgtttagaacaatagaaaaataaaaataatgct
cgtaccctcagccaaagtacactattcttctaaaaaaaagcgtgtaccat
ATAAAATAAATGCTTTTAACATCCTCGTGTCCGATATCACATGATATCCT
CAGCCTCGTGTCCACAATCACATGATATCCTCAGCCTCGTTGTCATTCAA
GAGAATATCACCTTCATCATCTTGAACGTAAATCATTTGTCCTTCAGCAC
AACATCGAACTGTACTACATTTG Run BLAST on NCBI transcript from alignment at sc0000363:215941..216856- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00020699 ID=TCONS_00020699|Name=TCONS_00020699|organism=Clytia hemisphaerica|type=transcript|length=916bp|location=Sequence derived from alignment at sc0000363:215941..216856- (Clytia hemisphaerica)
AATGAATTAGATTAATATTTCGTCGATTAAACAAATTTAATACGGCACTA
TGTACGAAAAATATAAAAAAATATAAAAAAAGGTTAGAAAATTATCTAAA
AACTAAACACATTAACAGGAATCCTGTAGAATAATATAAAATTAAAATCC
TAAAAATCTTAATACCACAAATATTAAAGGGAAAGATAATATTTTAAATA
GGTGCTCATGCATAGAAATAAGTCAATTTTGTTACTAACGTCATACCATC
CAGCTCACTCAACTCGACAAAGAAAACAAAAAAAAAAAAATTCCAAGATA
TTTTTTTGAAAACATTGAATCTTGAATTAAGAGAATTTTAGGAAATTGAT
ATCTGTAGGAGGGGGGGGGCTCAAAACATTTATTTACATGTTGAGTTGAA
TTCAAAAGTACAGTACAGTTTGTGATCTTTGACGAATCGAGAAAAGCTTT
GAATAAAATTCAAATATCTAAAAAAAAATTTCTTAAAATGAAATACACGC
ATTTTTTTTATATGAAAAACTTCTATAGATATATTAAGGTGAGATTTCAG
AGTTAGACTAAGCCTATTGTTTAGAACAATAGAAAAATAAAAATAATGCT
CGTACCCTCAGCCAAAGTACACTATTCTTCTAAAAAAAAGCGTGTACCAT
ATAAAATAAATGCTTTTAACATCCTCGTGTCCGATATCACATGATATCCT
CAGCCTCGTGTCCAAAATCACATGATATCCTCAGCCTCGTGTCCAAAATC
ACATGATATCATCAGCCTCGTGTCAAAACTCACATGATATCCTCAGCCTC
GTGTCCACAATCACATGATATCCTCAGCCTCGTTGTCATTCAAGAGAATA
TCACCTTCATCATCTTGAACGTAAATCATTTGTCCTTCAGCACAACATCG
AACTGTACTACATTTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00020699-exon-sc0000363-1575043694:216167..216856 | TCONS_00020699-exon-sc0000363-1575043694:216167..216856 | Clytia hemisphaerica | exon |
| TCONS_00020699-exon-sc0000363-1575043694:215941..216073 | TCONS_00020699-exon-sc0000363-1575043694:215941..216073 | Clytia hemisphaerica | exon |
| TCONS_00020699-exon-sc0000363-1510915933:216167..216856 | TCONS_00020699-exon-sc0000363-1510915933:216167..216856 | Clytia hemisphaerica | exon |
| TCONS_00020699-exon-sc0000363-1510915933:215941..216073 | TCONS_00020699-exon-sc0000363-1510915933:215941..216073 | Clytia hemisphaerica | exon |
| TCONS_00020699-exon-sc0000363-1491911889:216167..216856 | TCONS_00020699-exon-sc0000363-1491911889:216167..216856 | Clytia hemisphaerica | exon |
| TCONS_00020699-exon-sc0000363-1491911889:215941..216073 | TCONS_00020699-exon-sc0000363-1491911889:215941..216073 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000363 | supercontig | sc0000363:215941..216856 - |
Blast
The following BLAST results are available for this feature:
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