|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00020668 ID=TCONS_00020668|Name=TCONS_00020668|organism=Clytia hemisphaerica|type=transcript|length=3210bp
GAGCAAAATCGAAAATCTTATTTCTTCGGTGAATTTTTCCCAGCTTTTCT
CCACTCGAATTCAACATGGCGGGGAAATGTGGGCATGATCATCGCCATGA
AACCAAACCAGACGAACTTGGAAATCTCTACACTCTTTTCACTAAGATTG
ATTTGGAAAGAGTACAATGCTTGAATGAATGCTCAGAGGGATCGGGAAGA
GTGGTTTTCAAACCATGGGACAAGAGACTAGATACAACACAgctTGTTGA
GAGTGACTGTGATGAGGAACTACTTTTCAATATTCcTTTTACAGGATCAG
TGAAGCTGAAAGGAATCATTGTCGTGGGTGGCGAAGATTCCTATCatcca
tcaaaaatgagaattttcaaaaacagaCCAAACATGACTTTTGATGATGC
TAGTGGAAAAGCGGACCAAGAATTTGACATGCAACCTGATCATAAAGGTG
TTTTGGAATATATACCAACTATTGCAAGGTTTGCTAATGTAGAACATTTG
AGCATTCACTTTCCTACTAATTTTGGCGAAGAGACATCAAAAGTTTATTA
TATAGGATTAAAAGGAGACTTCATGAAAGCACATAAACATGGTGTAACAA
TATGTAATTACGAGGCTAAAGCAAATCCAGCTGATCACAAATCTGCTGAT
TATAACCCAGCCTCTCATTCTGTAAATTAGGGATTTATTTATTACATctg
gattttttgttttgtactTACAGTAAATGCTTTATTACAGTCTTCAGCTG
TGTTGTGATGCCCAGCTTTGGGGCATATTCCTTGtttggaaaatttattt
atattttgaaattttttatattGGGTGACCCGCACTCTATTAGAGTGTAT
AAAGGTTTGATATCTAGCAAGTCGATATGATATCTGATgtattctttttg
gacctaccgggaggtcctttaatttgaccgttgtccgttcgtctgttaca
agcttttctcgggattggctcattagtttttttttattttttgcacaatg
atacaaaatagcaatgccttaaaagtgacggagcccgatttttgaaaaaa
aaatgttgggggcaaatttgggctgatttgggccaaaaactacctaaaat
aaggttttttggactttgtgcaaaattgcttcattagtttttcctgattt
ttggcagaaagatggagagcaagattctctaaaaagtgactgaagcagtt
tttttcgggaaattttttttggccgtaaaaatctgttgttcttatttggg
gaaattcccttatgtcatttttagggaaaaagagcgtTTCTGGCGATTGG
atcgatatttttttctgattttttgtactttgatgTAATGtggtaatatt
taaaatctgatgaagtccgattttcaaaaaataatttttttggcgcaaat
ttgggccaaaatgtgcctaaaaatggggttttctggtgtgaaattgcttc
attagttttttcaaatttttttggacaaagataaaAGGCAAGTATCTCTA
AAACGTAACTCAAGCTGTTTTTtccggaaataattttttggctgtaaaaa
tcggattttcttatttggggaaactcccttttgtcctatttagggaaaat
gagcatttctcgagattggcttggtgtttttttcttattttttgcatagt
gctataaatggtaatatttaatttctgatggagcttgattttcgaaaaaa
taattttttgagcaaatttgggcagaaaagtgcctatattcaagctgctc
attacactttcttactctcttgctatttgtcctattgttatctgattttg
atcaccaggtaggtccgttcagcatgttgcttgtttaaatttgaaCCATA
GTTAAAAGCATCAagtcaaaattcatttttcgatTCTGTAGGgcaaaaaa
tgataattttattttttccttcaGGTTAGAAAAATGAGTATTGTAGATTC
AGAAACCaaaaattatctttcaaatgTTGTATCTGCATTCTCTCCTGGTA
TACGTTATGCTTGTGCATATGGATCAGGTGTATTCAAACAAAGTGGGCAC
CAGTCTATCAAAGATAATATGATTGATTTCATATTTGTTGTAAATGATGC
ATTTTCATGGCACCAACAAACCCTGAAAAAATACCCTGACCATTATTCCA
TAGTCAAACGCCTTGGACCAAAAGGGCTTTCTGATTATCAAAGAAGTTTT
GGAGctggtgtattttttaatacatgTGTTGAATTTGATGATCGCTTAAT
TAAGTATGGTATCATTGATATGGAAATGTTTGTTGATGATTTACTGGAAT
GGAAAGACCTGTATATAGCTGGTAGGCTTCACAAACCAGTTTACACTTTG
AAAGGTTTGGATAACCCTCTTATTGAAAAACCGTTTTCAGCAAATCTTAA
ATCAGCTGTTTTGACCTCCATATTCTTATTGGATGAGAAATGTTCAATGG
AAGAGTTATTCATCAAGATTGCCAGTCTCTCCTACACGGGTGATCCAAGG
ATGATTGTGGGAGAAGATAAAGGAAAAGTGAGAAACATTGTGACCCCTAA
CATAGAAAAATTTCATACTCTCTACGAccctattttgaaaaatatatcta
aTATTAATGTGAACAATTCTTCTATCATACAAGATATGGACCCACTTCAA
AGATTTGAGCTTTTACAAGAACTTCCTAAGAATTTGAATACATTAGTTCT
TAGAAACTTGAATCTAAATAACAAAGCAAAGGACTTTCAGAAACGATTTA
TTGATTTGTCAaatgagaaaatcaaagaatcaTTTGCCAAAGCTGTTAGT
GATATTGTCAGAAGTTCAAGTACAACACAGACTATCAAAAACTCAACTAC
GGCCGGTGTCCAAAAATCACTTTATTACGGtggccagaaaatgaaaaaga
tgttCAAAGGATTGATTAGAAAATGATTGTTGATGATATAATTTTAAGGA
GAATGCTttaaacaaagattttgtaattattttgtTATATAAATTAGAAT
AATTTTGAATGCTTTTTTTACACTTACGTCAGCTGGTAATGGACCAAGCT
CTTCAAAATTCCTTATTtattcattgaatatttcgatatgtttttacttt
aacttttctaCACAATCTAAAAAACTTGCATACAAGACTCAATTTTAATA
TTAGACTCGGTTATATTGGAAATTATACTTTGATGATGGAAATGTTCCAA
AATATATGAG Run BLAST on NCBI transcript from alignment at sc0000363:92402..109924+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00020668 ID=TCONS_00020668|Name=TCONS_00020668|organism=Clytia hemisphaerica|type=transcript|length=17523bp|location=Sequence derived from alignment at sc0000363:92402..109924+ (Clytia hemisphaerica)
GAGCAAAATCGAAAATCTTATTTCTTCGGTGAATTTTTCCCAGCTTTTCT
CCACTCGAATTCAACATGGCGGGGAAATGTGGGCATGATCATCGCCATGA
AACCAAACCAGACGAACTTGGAAATCTCTACACTCTTTTCACTAAGATTG
ATTTGGAAAGAGTACAATGCTTGAATGAATGCTCAGAGGGATCGGGAAGA
GTGGTTTTCAAACCATGGGACAAGAGACTAGATACAACACAggtatttct
ttagtttttgaaataaaataatttgaactttgaaaaaaaaattttttata
caaGTTGTCCGATATGTACATATCTTTGTTCTATGCTTACTTTCCAACAT
TTACTATTTATACTGTAAACACACAAAGTGCAATATATTGATCGCACGTA
AGCGcatcaaaacaccagcttttcaCTATAGAGAAAGTGTCTACTTTGct
tctattgtttcattttcaaaacaaagttaaaacgcatgcgtatattttta
tttcataaacTGTTAGTCGTTATTCATATTATACGCAAAACACAAAGAGA
ATGAATACACGTACCgacaactgctctaacttgggactatctgacaaaaa
acattggacagcaattcggccaccatttcactgaacctccaaagtcattt
gatttgagttaatgaacgacgtattaaaaaatacacaatatttctctttt
gcaccgagtaggcttttaaattgaaatatgaaagttgttccgtagtggaa
cacacacgCAAATGTccggaacgaagaagaccaaattagtggcaaaacga
tggagcatttgacgtcactcgcaccGCAACttacacacttgttatttgtt
aatcccatctaGCGATAGacagcgggcgttctctaattcccCAATCGGCG
Tcatccggtcattttgaatgaaaacaaaaaatggcgcgctcagtcaggac
ctcatttcactttatcgatattacgtaaacagcagtgtgcgctaaataat
cttggtttcgctttcgatttcaagcaaaggtcttagcaacagggcgcgcg
gaCATAGCAacagggctgggtagaaaatctgaacatagaattcaaaaaaa
ataccgatcatcgtatagagcacttaaaaataccccctttctatgtttag
tttgttctaccttggattgtaactgaaaatatcttcaaaaaacctttgtc
cgctatcagcccgcgcggtaatctttgcccacttcaattcttagataatg
aataagagaggtgtgCTTAGCTAggccgtgctcgcgggcgataaatttat
gtttacttatcttgtatactttagtggtatttatccaatgaaaaggatgt
tgacaaaatatgcacggcgctgacaaaatatgcacggcgctgacaaaata
tgcacggcgctgacaaaatatgcacggcgctgccaaaatatgcacggcat
tgattatgacatcattaaatatgtcaatgtcgattcaacgcccgttaaag
aaaataattcgtagatagttctttttatcttgaaatttagaaatacgaac
aaaaaaagaatcaaatttaatatttgtttcctatctagattatattagca
ttacagaatacggtaaattttcacgaaaaatatttcgcgatggtggtacg
cccaatcgcgcccactggaaagttccaatttttaattatcaggaaatcgg
ggaaaccggttcaccacgtggataaaatacgtacggaatgaaacctgaca
gaaggttttcaaccagatttattgtgacatgttatgacagaaagtatgat
tgataaacttggtggagttatcaaaacaaatttgttgtcaaagagattta
acagtaagtgaaaatacaggccagatatccagtcccatgtttcagcCAAT
GGtctcaagttagagcagttgacggtaggtAGGGGGTGGTACAATCACTT
TCGGTCGGGTGGGGTTGTGGATGGTAAAATTAGTCGTTCTTTTTTAATGT
TGTGAAGTAGGCACTttctcccccctcttttttgagttttgtctcgttta
cccaaacacTTTGCAAAGTGATGCAAACCAACAGTTCCCAAAAAGTGACA
AAGCCTGGTATAACTTTCCTGGAAACACAGGCAAAaatgggtttgtttac
ctccagagaccaaacggtgaaGAGCACCAAAATAATTCGCATGCATCTTT
TTTGCCAATTACggacagttagtggaagtactttgatttttgaagcaTCT
TTATGtcacatagaacaaaagaaaatagcaaatgAACAAAAGAATTACCC
TTAGCCACCATTTCGCAACCATGGGGAAACGCAATTTTACGGAAATGGGT
ATCCTCATATCAAATAAAGCATCTTCCGAAAATTTTATTCTTACCCATAA
AtgccagtttgcagagtatgcAAGGCTGCACTCGAGGAAAAATTCAGAAA
TACCAAGTTCCGCACTGGAAGAGCACAACTGATAAACTTTGGTCCAAACA
ACGTGCACCTATACCTTGGAATTTGgcccaaaatgacaaaaaattgctaa
aattagctgCACTTGAGGAGAAAATAGCGGAACTCTGCCCTTGGGGTTAA
AAGCCTGTCTTCACTTGCAcctaaaaatctcaaattttgcACATGCACTC
GACTTTTTCCGAGATTTTGAGCAAACACACTGCAAACTGGCAtaaatgca
aaaataaaaaatgaagaaggttTCGTTTTCTGAtcgtctttttaatctgc
catgaaatgttataaaattccttatagaaaGACACATTCTCCTGCAGAGA
GGCTTCAAAAAGATGatgtagaaaaaagttgttaaaaagtatgtcatttt
atcttaacaatatttaagttttatgaCTTGTTCTCGCTCGTTTGGTAGTA
AAAAGAACATGCTTAAAATGAGGTACTTCCACTAATTGCTGGGAAAGGcg
tatataaaaaaagaattttgagcaaatttgtgccaaaaagtgcctaaaaa
tagCTAGGGTTTTATTGGACTTTGTGTGAGATTGCTTCAatagtttttca
gattttttgcataaagatagaAGGCAAAGGTctttcaggaaaattttttt
agccGTAGActtcagattttcttatttggggaaattcccttttatcattt
ttagggaaaattagCATTTCTCGTGATTgccttggtatttttttctgatt
ttttgcacaatgatgtaaaatggtaatgttcaaaatctgatggagcccgt
tgaaaaaataatattatgggcaaatttgggccaaaaatgcctaaaaatgg
AGTTTTCttgactttgtgtgaaattgcttcattagttttgtGGCGTTACA
GGAATTGACGCTGTTTGTAACTTTGTTTGTAATCtttgattgatattttt
gttgatgTGATGTGTTCAAACTGTAGAAATAAATAACAAAGGTCTATGAG
TGttgtgtttataaaaaataagtctaagttcaaaaatgaaaatgtctgaa
ttcaatgaaaaagtataagtctgattgaaaaatgaaaaagtataaGTCTG
ATTGAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGTAGGTTCTGCATCAACTT
GGATCTCAGGTCATGGAGATTGATACGCATCTCCTTGCATCCCTTCAGAA
GTTGACTACCCTCATCGCACAATAGGCATTTTGGATAGCCATGGTCGCAT
GAAAATCTCGTGAATGCTTGTATGAAAGAGGTGGTTGAATAATCGTCCat
gacttttattttgattgCAGATGTAGCACAACAGCAAAATACTATAAGCC
ATATTTTGACGGTAGTACGTTTGTGACTTGGTGAAAATGACTGATACGGT
CCAGACAGATCTAACTGTGTGTAGTAAAATGAGGGAGCAATGGTTAGATT
GAAGGATGATACTGGTCCCATTGCCATCTCCACAGTGCGTTTAGCGANNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATGGGCGATCTTGATTGATT
CTTCTCCTGTTAGACAATCATCGACATAAACATCTTCATTGACGATGCGA
TAAACTTCAGGATATTGATCTTGAAATAAGTAGGCAATCTGACGAAGTCC
TCGCTCCGCTTGATTTCCGCTGGATCTGATTCCATAGATTAGTGTTTTGA
TCACTTTTTCCATTGGTGTCTTTGATGAGTCAAGTTCTTGGTGCCAAATA
TAACGCTGATAGCACCAATGGTCTGGGTTGAGGTGGATGGTGTTGTACAT
CTTGCATACATCGGTATGTATGCCAATTTTATGAGTTGACCAGCGTAGAA
GTACTTCTTGCAGCTTGTTTAGATTGTTGCTTCCTTTGGCAAGGCAGTCG
TTTAAGCTGTAACCAGATGCAGTAGGGAAGGAAGCATCGAATACAATACG
ACATGGTGTGCTGAGCGAAGTTGATTTCCAAACTGCACGCCATGGGATGA
AGTTTTGAATTGAGTTTGCGTGAAGTGATTGACGGATGTCTTCTGATAAG
TTGCTGACATAATCCACAAAGCCCATGCTCTGTAGCTTTGCTTCAGACTT
CAGGATATCTTCCTTGTCTTTAGAGTTGCGATCAAGTTTCCTCAGCTGCT
GGTAGTAGATCTTCTGTGCGATTGATTTGTTTGGGGTGAGCTTGACATCA
GCCTCTTCGATGAATGGCAGTTTTGCTGTGATGGTCTGATTGTTGGTATC
AATTGTGATGGAAGAATTGATGATTTCTTGTTCTATCTCCTCCCTGATGC
TGATTGCTTCTTGATGGCTTGATTGCTTGCNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNATTTCCAAGGTGcaacaaattttttgtttcatgat
ttataaattaaattttgtactttttatttttgttttagaaatatattttg
ataaaagtcactttacaagttttttctgattttttaaataattatgcAAA
TTGGTAATCCTTACAGATCCTTAAAATGTGAGaattcaagattttcaaaa
gaaaaaagttttaacatttaagcaaatttgggccaattttGGATTTGTGG
AAGTTGTTTCATTCAAGTTTATCTTTCAACGTGAAACAAGTTGCATCATG
TTTTCAAGCTTACACATCTCTATGCTATGctgttatcttttcttttttat
ttttaaagcattttgattttgactcaGCATGTTTCCAACTAGCTATATCt
agtaggtccattcagcatggtCAGTGttgcaaataaggaaatttcatttg
gccggtaattttttgAGCATAGAGAATGATTTGagcatttagaaaatttt
gtctaaaataacctttagattggctaaaaacctattttaattcaaaatct
aTTACCTTATTAATTTGAAGAGCTATTAAGCATTTATCTAAGCCTCTagt
cttcaaattttaaccggacaaTATGAAAAAACTGAGCTTCAGAATGGCAA
ATGGTAGAAACTACGAAATGACCGGTATTTACCGGTCACCAGGcattatt
tgcagcactgatgATGCTTGTTTCtgtaaaaaggaaaattattttttgtt
cccTCTCATCAGTTCTAATAAGTTTGTTTTTAGTTATTCCCGTCAAAGCT
CATGTGATATTCTTTATCGCAATTACCCgcttcaattgaattttcactaT
GCACCCTTAAAAGTAAttgagttttagaaaaacaataacagaCAGTGTTA
TTTATTTGGCGACGAATTGCCCTTTAAAGTCGGATAACagtatctttttt
caaaagaagtgaTTGTTAAATTGCATTCTTGTTGTCCTTTCAATGATTTG
TTTTGTTCAACTTTGATGGGGAATATTGTAAACCTTGGATTTTTCCAATA
GCAGTTATCTAGGGCATCAGAATTTAGAAAGCGTAGTCAAATTTAAAACC
tctcattggacttttccagaaaaaaaccgtataccccctgttgaggaggc
ccatttccgttccaaaggggtaaggtttgatatgtggcagaattccatag
ggagatacaaaaataactggaattccatgggtgTACCTTTTTAAAtcctt
ctaaaattcaaaattccagaggggtttaaaaaAGCCCATTGTgagaaatt
ttatcccatttgtAGACGCAAGTAATTATACCGttagtaatttgttattc
aatgaACTGTCATGTCTGAGTAAAATCATTAATTATTATAAATGAAAAAG
GTTTTACAACTAATGATAATAACAGTAATagcacgatgagttattttttc
ttatttggcgcgtCTTCAAaaagagcaattaatcgttaattgcatcctgt
agagagcaattaatcgttaatcacactcttcaatacCGCGCCAATGTTGA
TTTTAATGTGTTTTTTTATCGAACGTTTATAAttaattttgtgagaaaga
aaatccataaacaacaataaaagaaaaacataaagagaagagaaaaatat
aaaactttcagtgtaatttacATTTCTAACGGGGAAAAGTAGTGAAAcac
attgtgcgattagctcgtaatcacatgataacgagtgcaatttgaaaata
attgcaatagtgatttttttgttgttaattTTCCGAGCCcaaaaggacga
ggaaaattcgaaccaaaaaaatcacgagtgcaattttcgaattgtacgag
ttattatgtaaTAATATACTAATTATTGGTAAGTCATAGGGATACTGTTA
ATTTTACTTTTGATTTAATTCCCATATTAGTACTTTCACAATGCAGGATA
TGATCATCTTATCTTTAGAGTTTAGAATTAAATTTATATATAGAGATACT
GATAACtttgtattatttttatttgaaccAATCATAACATACAATAAATA
CATGgcattattttttacttttagctTGTTGAGAGTGACTGTGATGAGGA
ACTACTTTTCAATATTCcgtaagtttttatttctgtaaGTGCTTCAttta
tgaatttcaaaaaagcataatgttcaaattcaaattatttGTCAAATTGA
TTCTTTGACGTAACAAATTGTCTTTTATCTTTCAATCTAATTTGttgtat
caaaaaaaatttttccaatcttgtttacatttttaaattttatgaataGT
TTTACAGGATCAGTGAAGCTGAAAGGAATCATTGTCGTGGGTGGCGAAGA
TTCCTATCatccatcaaaaatgagaattttcaaaaacagaCCAAACATGA
CTTTTGATGATGCTAGTGGAAAAGCGGACCAAGAATTTGACATGCAACCT
GATCATAAAGGTGTTTTGGAATATATACCAACTATTGCAAGGTTTGCTAA
TGTAGAACATTTGAGCATTCACTTTCCTACTAATTTTGGCGAAGAGACAT
CAAAAGTTTATTATATAGGATTAAAAGGAGACTTCATGAAAGCACATAAA
CATGGTGTAACAATATGTAATTACGAGGCTAAAGCAAATCCAGCTGATCA
CAAATCTGCTGATTATAACCCAGCCTCTCATTCTGTAAATTAGGGATTTA
TTTATTACATctggattttttgttttgtactTACAGTAAATGCTTTATTA
CAGTCTTCAGCTGTGTTGTGATGCCCAGCTTTGGGGCATATTCCTTGttt
ggaaaatttatttatattttgaaattttttatattGGGTGACCCGCACTC
TATTAGAGTGTATAAAGGTTTGATATCTAGCAAGTCGATATGATATCTGA
Tgtattctttttggacctaccgggaggtcctttaatttgaccgttgtccg
ttcgtctgttacaagcttttctcgggattggctcattagtttttttttat
tttttgcacaatgatacaaaatagcaatgccttaaaagtgacggagcccg
atttttgaaaaaaaaatgttgggggcaaatttgggctgatttgggccaaa
aactacctaaaataaggttttttggactttgtgcaaaattgcttcattag
tttttcctgatttttggcagaaagatggagagcaagattctctaaaaagt
gactgaagcagtttttttcgggaaattttttttggccgtaaaaatctgtt
gttcttatttggggaaattcccttatgtcatttttagggaaaaagagcgt
TTCTGGCGATTGGatcgatatttttttctgattttttgtactttgatgTA
ATGtggtaatatttaaaatctgatgaagtccgattttcaaaaaataattt
ttttggcgcaaatttgggccaaaatgtgcctaaaaatggggttttctggt
gtgaaattgcttcattagttttttcaaatttttttggacaaagataaaAG
GCAAGTATCTCTAAAACGTAACTCAAGCTGTTTTTtccggaaataatttt
ttggctgtaaaaatcggattttcttatttggggaaactcccttttgtcct
atttagggaaaatgagcatttctcgagattggcttggtgtttttttctta
ttttttgcatagtgctataaatggtaatatttaatttctgatggagcttg
attttcgaaaaaataattttttgagcaaatttgggcagaaaagtgcctat
attcaagctgctcattacactttcttactctcttgctatttgtcctattg
ttatctgattttgatcaccaggtaggtccgttcagcatgttgcttgttta
aatttgaaCCATAGTTAAAAGCATCAagtcaaaattcatttttcgatTCT
GTAGGgcaaaaaatgataattttattttttccttcaGGTTAGAAAAATGA
GTATTGTAGATTCAGAAACCaaaaattatctttcaaatgTTGTATCTGCA
TTCTCTCCTGGTATACGTTATGCTTGTGCATATGGATCAGGTGTATTCAA
ACAAAGTGGGCACCAGTCTATCAAAGATAATATGATTGATTTCATATTTG
TTGTAAATGATGCATTTTCATGGCACCAACAAACCCTGAAAAAATACCCT
GACCATTATTCCATAGTCAAACGCCTTGGACCAAAAGGGCTTTCTGATTA
TCAAAGAAGTTTTGGAGctggtgtattttttaatacatgTGTTGAATTTG
ATGATCGCTTAATTAAGTATGGTATCATTGATATGGAAATGTTTGTTGAT
GATTTACTGGAATGGAAAGACCTGTATATAGCTGGTAGGCTTCACAAACC
AGTTTACACTTTGAAAGGTTTGGATAACCCTCTTATTGAAAAACCGTTTT
CAGCAAATCTTAAATCAGCTGTTTTGACCTCCATATTCTTATTGGATGAG
AAATGTTCAATGGAAGAGTTATTCATCAAGATTGCCAGTCTCTCCTACAC
GGGTGATCCAAGGATGATTGTGGGAGAAGATAAAGGAAAAGTGAGAAACA
TTGTGACCCCTAACATAGAAAAATTTCATACTCTCTACGAccctattttg
aaaaatatatctaaTATTAATGTGAACAATTCTTCTATCATACAAGATAT
GGACCCACTTCAAAGATTTGAGCTTTTACAAGAACTTCCTAAGAATTTGA
ATACATTAGTTCTTAGAAACTTGAATCTAAATAACAAAGCAAAGGACTTT
CAGAAACGATTTATTGATTTGTCAaatgagaaaatcaaagaatcaTTTGC
CAAAGCTGTTAGTGATATTGTCAGAAGTTCAAGTACAACACAGACTATCA
AAAACTCAACTACGGCCGGTGTCCAAAAATCACTTTATTACGGtggccag
aaaatgaaaaagatgttCAAAGGATTGATTAGAAAATGATTGTTGATGAT
ATAATTTTAAGGAGAATGCTttaaacaaagattttgtaattattttgtTA
TATAAATTAGAATAATTTTGAATGCTTTTTTTACACTTACGTCAGCTGGT
AATGGACCAAGCTCTTCAAAATTCCTTATTtattcattgaatatttcgat
atgtttttactttaacttttctaCACAATCTAAAAAACTTGCATACAAGA
CTCAATTTTAATATTAGACTCGGTTATATTGGAAATTATACTTTGATGAT
GGAAATGTTCCAAAATATATGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00020668-exon-sc0000363-1491911889:92402..92643 | TCONS_00020668-exon-sc0000363-1491911889:92402..92643 | Clytia hemisphaerica | exon |
| TCONS_00020668-exon-sc0000363-1510915933:92402..92643 | TCONS_00020668-exon-sc0000363-1510915933:92402..92643 | Clytia hemisphaerica | exon |
| TCONS_00020668-exon-sc0000363-1575043694:92402..92643 | TCONS_00020668-exon-sc0000363-1575043694:92402..92643 | Clytia hemisphaerica | exon |
| TCONS_00020668-exon-sc0000363-1491911889:106776..106819 | TCONS_00020668-exon-sc0000363-1491911889:106776..106819 | Clytia hemisphaerica | exon |
| TCONS_00020668-exon-sc0000363-1510915933:106776..106819 | TCONS_00020668-exon-sc0000363-1510915933:106776..106819 | Clytia hemisphaerica | exon |
| TCONS_00020668-exon-sc0000363-1575043694:106776..106819 | TCONS_00020668-exon-sc0000363-1575043694:106776..106819 | Clytia hemisphaerica | exon |
| TCONS_00020668-exon-sc0000363-1491911889:107001..109924 | TCONS_00020668-exon-sc0000363-1491911889:107001..109924 | Clytia hemisphaerica | exon |
| TCONS_00020668-exon-sc0000363-1510915933:107001..109924 | TCONS_00020668-exon-sc0000363-1510915933:107001..109924 | Clytia hemisphaerica | exon |
| TCONS_00020668-exon-sc0000363-1575043694:107001..109924 | TCONS_00020668-exon-sc0000363-1575043694:107001..109924 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000363 | supercontig | sc0000363:92402..109924 + |
Blast
BLAST of TCONS_00020668 vs. Swiss-Prot (Human)
Match: PITH1 (PITH domain-containing protein 1 OS=Homo sapiens GN=PITHD1 PE=1 SV=1) HSP 1 Score: 241.506 bits (615), Expect = 1.085e-72 Identity = 111/200 (55.50%), Postives = 144/200 (72.00%), Query Frame = 3
Query: 78 CGHDHRHETKPDELGNLYTLFTKIDLERVQCLNECSEGSGRVVFKPWDKRLDTTQLVESDCDEELLFNIPFTGSVKLKGIIVVGGEDSYHPSKMRIFKNRPNMTFDDASGKADQEFDMQPDHKGVLEYIPTIARFANVEHLSIHFPTNFGEETSKVYYIGLKGDFMKAHKHGVTICNYEAKANPADHKSADYNPASHSVN 677
C E P++ G Y L+ +IDLER+QCLNE EGSGR VFKPW++R D ++ VESD DEELLFNIPFTG+VKLKGII++G +D HPS+MR++KN P M+FDD + DQ F + D G LEY I+RF+NV HLSIH NFG +T+KV+YIGL+G++ + +H VTICNYEA ANPADH+ P +H ++
Sbjct: 12 CRCAAEREEPPEQRGLAYGLYLRIDLERLQCLNESREGSGRGVFKPWEERTDRSKFVESDADEELLFNIPFTGNVKLKGIIIMGEDDDSHPSEMRLYKNIPQMSFDDTEREPDQTFSLNRDLTGELEYATKISRFSNVYHLSIHISKNFGADTTKVFYIGLRGEWTELRRHEVTICNYEASANPADHRVHQVTPQTHFIS 211
The following BLAST results are available for this feature:
|
