TCONS_00020653 (transcript) - C. hemisphaerica

Overview
NameTCONS_00020653
Unique NameTCONS_00020653
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1652

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00020653 ID=TCONS_00020653|Name=TCONS_00020653|organism=Clytia hemisphaerica|type=transcript|length=1652bp
ATGGAGTTTGTTATGTCGTATTTTTGATATCCCTCAACAAATGGCGCCCG
ATGTGATAGACACAAGTGGACATATCCTTGACGTACCTGAAGAAATATTT
GGCGCTTCATTCCCTTTAACGTCTGTTGTAGCAGACACACAAGCCACCGT
GTTTGGATTGAACGGTTTCAATGCGGGTGACGCGTGTGCCGTGTTGGGAA
CTGGGTCCTTCTTAATGGTCAATACTGGAAATTACTGCCACGCCTCCGTT
AAAGGAGTTTATCCACAAATCGGTTGGCAGATCAAGGATGAAGTAGCACT
TATTTGTGAAGGGAATATCACTGGTATCGCGCCCTCCATTGAATGGGCAC
GAGAAATCGgtCTTTATGAAAATGTCAACGAACTTTCAGATTTCGTCAAA
ACAGTAGAAGGAACTGACGGCATGTACTTCATCCCAGCGTTCAACGGCCT
ATCGGCACCGTATCGAGATCCATTCGCTTGCACCGGGTTCATTGGGATCA
AAAGGAATGGAACCAAAGTGCAAATGGCTCGAGCAGTCTGTGAAGGAATC
GCTTTCAGGTTTTTAGAGATGTATAATGTGATGCGAGAGGAAACACACAT
CCCTTTTGAGCCCGTCATCCGGTTATGTGGCGGTATCTCGAAGAATGATT
TTATAATGGAGTTGATCAGCTCATTAGCAGATTGTACCATTGAAAGAGCT
TATAACCATGATACTTCATGTCTCGGTGCTGCTTGTCTGGCTGGTCTTGC
TGCAGGTGTGTGGAAAGATAAAGAAGAAATGATGCAACACACACAAAAAC
CGACCATCATCAAACCCGATCCTATCTTGAAACAGAGGTATCTACCCATC
TATAAAGAGTGGAAAACAGCTGCCAAAAGATGTCTCAAATGGTACACCTG
ATGATGGTGGAAGCGAGGCTTGATATACATGCAAATGAGGCTGGTTATAC
GAGGTTTGTCATGTTTAGGTCTTTAGATAACTTACGGAGTATGTATATAt
ggaatatatatttttcaagctGTGTTTTTTACAATCCAAGTATATTCAAG
TAATTAGTGCAATATTCAACATGTAGACATCTTTTTTGTAATTGTGACTT
TCCATTAGCAAGAGGTTGCTACTCAGCACACCTACTTTCGAATGTGTCGG
GTAGAGTTTCAATGAAGGGAACCATGGGTCATTATCAAGGAGTTGCTACT
CAGCACACCAACTTTCGAATGTGTCGGGTAGAGTTTCAATGAAGGGAAGT
ATTTCAATATGTGAAAGTCACGATAGCTTTGATGTCATTCAATATCAATG
TAATAATAGCTAGTGAGGCTTTATTTATATTTGATAACTCATGCAATCAT
ACTCCTGTGTAATGATATCGAGTTGTGAGTTTTTTGACATTCATATCAGA
AGAGCTGGAGTGGCTTTGTTTGTAGTTTGACTGTAAGGTGTCTTCTTTTA
AATTTGTACACAAGCTTCAAAGTGTGTTGCCAAGGTCTCAGAACCTCCTT
TTTCTCATCACATAAatgggcccccagcggtttgcgtgaatgcgtgaatg
ggctttttcacatgcgtgaatgcgtgaattagaAAACTTCGCTTGAACAG
AAGTTGGAAAAGAATTTGCCTGATTACCTGAACTGAAGGTcttcttgggg
gg
Run BLAST on NCBI

transcript from alignment at sc0000359:280356..288967-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00020653 ID=TCONS_00020653|Name=TCONS_00020653|organism=Clytia hemisphaerica|type=transcript|length=8612bp|location=Sequence derived from alignment at sc0000359:280356..288967- (Clytia hemisphaerica)
ATGGAGTTTGTTATGTCGTATTTTTGATATCCCTCAACAAATGGCGCCCG
ATGTGATAGACACAAGGTAAATCACTCTTTTGTTTTCATTTTTAAGCGCA
AATGGAGTGATATCTGTCCATTGTTGTTTGATGTTTCTTTATCAGTTTTC
CCTGAACTGACTGATACGAGGTAGGTCTTCTTTGTGTTGACAGACGTTGT
TAAAAGAAACTCGAGGATAATATCCCCCACGGACAAAGACTCCCCAGAAA
ATTACCTCCTAGAATAAAGTTCAATCTTAACAAATGTACATTAATTCTTT
TGGGGGGAGGGCATTGCCCTTATTAAAAGAGAATTTCTCTCTTAGACTAG
CTATGTAAGGGTCGAAAACTATCTTTGTGATGGAGAATGAGTGCCCACAA
AATGGGAACGGTGTTTTGTATGCGACGGTGTATACAGCAGTCTAGAATAG
GAAATAAAAATAAATCAATTCTTCGTTTATTGTGCTTCGGCCACGCCTCG
ACCGCTCCAAACCATTTCAATTTCAATTTTCAATGTTCTTCTTTTACAGT
GGACATATCCTTGACGTACCTGAAGAAATATTTGGCGCTTCATTCCCTTT
AACGTCTGTTGTAAGTATCCCTTTTCTTCACATTTTGTTTTCTCAAAAGG
TGTAAGGTTCCCTTTTCTTCACATTTTGTACGCTCAAAAGGTGTAAGATT
CTGTTTCCTTCACATTTTGTTTTCTCAAAAGGTGTAAGGTTCCCTTTTCT
TCACATTTTGTTTTCTCAAAAGGTGTAAGGTTCCCTTTACTTCACATTTT
GTTTTCTCAAAAGGTGTAAGGTTCCCTTTTCTTCACAATTTGTTTTCTCT
AAAGGTGTAAGGTTCCCTTTTCTTTACATTTCGTTTTCTCAAAAGGTGTA
AGGTTCCCTTTACTTCACATTTTGTTTTTTCAAAAGGTGTAAGGTTCCCT
TTACTTCACATTTTGTTTTCTCAAAAGGTGTAAGGTTCCCTTTTCTTTAC
ATTTCGTTTTCTCAAAAGGTGTAAGGTTCCCTTTACTTCACATTTTGTTT
TTTCAAAAGGTGTAAGGTTCCCTTTACTTCACATTTTGTTTTCTCAAAAG
GTGTAAGGTTCCCTTTTCTTTACATTTCGTTTTCTCAAAAGGTGTAAGGT
TCCCTTTACTTCACATTTTGTTTTTTCAAAAGGTGTAAGGTTCCCTTTAC
TTCACATTTTGTTTTCTCAAAAGGTGTAAGGTTCCCTTTTCTTTACATTT
CGTTTTCTCAAAAGGTGTAAGGTTCCCTTTACTTCACATTTTGTTTTCTC
AAAAGGTGTAAGGTTCCCTTTTCTTTACATTTCGTTTTCTCAAAAGGTGT
AAGATTCTGTTTCCTTCACATTTTGTTTTCTCAAAAGGTGTAAGGCTCTC
TTTTCTTTACATTTCGTTTTCTACAAAGGTGTAAGGTTCCCTTTACTTCA
CATTTTGTTTTCTCAAAAGGTGTAAGGTTCCTTTTTCTTCACATTTTGTT
TTCTCAAAAGGTGTAAGGTTCCATTTTCTTCACATTTTGTTTTCTCAAAA
GGTGTAAGGTTCCCTTTTCTTTACATTTTGTTTCTCAAAAGGTGTAAGGT
TCCCTTTCCTTTACATTTTGTTTTCTCAAAAGTTGTAAGGTTCCCTTTAC
TTCACATTTTGTTTTCTCAAAAAATGTAAGATTCCCTTTTCTTCACATTT
TTTGTTTTGTCAAAAGTTGTAAGGTTCCCTTTACTTCACATTTTGTTTTC
TCAAAAGGTGTAAGGTTCCCTTTACTTCACATTTTGTTTTCTCAAAAGGT
GTAAGGTTCCCTTTCCTTCACATTTTGTTTTCTCAAAAGGTGTAAGGTTC
CCTTTTCTTCACATTTTGTTTTCTCAAAAGATGTAAGGTTCCCTTTCCTT
CACATTTCGTTTTCTCAAAAGGTGTAAGGTTCACTTTCCTTCACATTTCG
TTTTCTCAAAAGGTGTAAGGTTCGTATGCTTGTAAAGATTTTGTAATTTT
TTACTGGAACCTCAGTAAACTCGAATGTTTTTTTATTTTTTACACCCTCA
CCACTAGGCTTGAGAGATTTTAGACTCTTTGTTTTTTGTTGATAGAGTTT
CTACATTAATTTCAAAAGCCATTTTTTGCCTTGCTGTGGAAATTTGAAAA
ACAAATAACTGATGATATGATACTTCTTTAGGTAGCAGACACACAAGCCA
CCGTGTTTGGATTGAACGGTTTCAATGCGGGTGACGCGTGTGCCGTGTTG
GGAACTGGGTCCTTCTTAATGGTCAATACTGGAAATTACTGCCACGCCTC
CGTTAAAGGTTTGACCTTTTATACCTCGGTTATTTTTCAGCGTTTTTCAA
CTTCGATGCCGTAAATATGTTCTTCTGACTTTCATGGTGACTTTTACTGT
CCGCGTAAATCTCGTTAGATTTGTTGACCCCATCTTTCAAATACGATGCG
TGTTTCATAACTAACTTTAAAAAATACGAAAGGTTATCCAGCCTTTGTGA
AAATTGATTATTTTCAATGTTTTTGTGCCACTTCTGTCTTCTGAAGCTCT
GCAAAAAAGGGTATTATTCTTGATAAAATTTTCAGGCTTTTCCTTTTAGG
AATATGAAGATCATTTATGTCTTTGACTGCCAAATATCTAGAAACTGCTC
AAACATTTCTTCCATTTCACTGCAACCGAACAACAAAGGTGTTTCTCTTG
AACCAACCAAAAAAATCAATTTGTTTTTCACCTTTAAGGAGTTTATCCAC
AAATCGGTTGGCAGATCAAGGATGAAGTAGCACTTATTTGTGAAGGGAAT
ATCACTGGTATCGCGCCCTCCATTGAATGGGCACGAGAAATCGGTTTGTT
GACTCGTTTGTTTGTTTGCTTTGATTGAGGGGAAACAACCGCCCTATTAG
ATTAATAGCATAGTGCACTTTTGAGGACGACAGAGTAACTAAAGCGACGA
AGCGACTTGAAATAACCCGCAGTTTGACCTGCAAAATCGAGGACGATAAA
AGTGCTTGTTTGCCGTTGTCTTCAGTTGTTCAGGATCTGGACAAATTAAA
AGCTAACCGTCTCCGTCGCAGAAAAACACAGATACATAAACTCCCTAAAA
GTTTTTGTTGAGTGCGGCCTTGACAAAGCCATTAAATAACTACTTCCAAC
AAGCAGCCGCTGCTCATAATTTCTTTTTAGACCTACCACGGAGGTCCTTT
AGATTAACTGATGTTCGTCTATTCGTCTGCTTTTCTCGGGATTGGCTCAT
TAGTTTTTCTGATTTTTTGCACAGTGATGCAAAATGGGGATTCCCAAAAA
GTGCTAGTTTTTTATAATTTTTTGGGCTGCTCACGACACTTTCTTACTTT
ATTGCTATTTGTACTATTTTTATCTGATTCTCATCATCAGGTAGTTTTTT
TACCATGAAGAATCTCTCTCACTGGGAAGATGTTTTATGAAAGCTGAATT
AAGGATATTAGGGGATAAAAGCTGAAAAGAATTCTTTATTTATGTTTTTC
TTTTTTGTAGGTCTTTATGAAAATGTCAACGAACTTTCAGATTTCGTCAA
AACAGTAGAAGGTTTGTTCACTCTGTCTTTCAATAGTATTGTAGATTTCC
TGTGAAAGTGTTCCCAGTTTTCAAGTCGACTAGTCCTCCGTGTTTTAATC
TGTTTTACGTCAGATTTTCGAAGGTTTCAAATTTCAAAACATTCGAATCC
CGCTGTTAACAACCAGATAAGAAAACGAAATGGTGGCATAGTCAGCTCTT
AAGCTAGACACACTTAATTTGAAGTTCGGTTCAGTCAAAGATCAGCGGCA
AAAAACTACAAGCCTTCAATTGCTCAAATCACTAGATCTGGCTTTCTGCT
TTTGACTGAACTTTGCTTTGAAACAACCCGACGATGCACTCAGATAGTGA
ATACAAAGCCTGTCTATTATAAAAAATAAGCGGTATTTCAACGAAAATAT
TTTCTGCATGTCCTCAAGATTTCTCTCTTGTACAGGAACTGACGGCATGT
ACTTCATCCCAGCGTTCAACGGCCTATCGGTAAGATAACAAACCTTTACA
TTTCTTGATTCTCAAATGGTTAGAATGCGTCTCCAAACCATTGATCAATT
ATTTTTTGTACAGATTTTTTAAATATACAGCTTTAAAAGTGACATAAAAT
CTATAACTTGGGACTTAGGCTATAATTTTGGTATTATTAGGAAGCTGTTT
TTCTCTAAACGTACACGGGTATTGTCTCTTTATATCCAGTGTCCAGCCGT
GAGCTAATAAGCAAAAGTTTAGGCATTGGTACTTAGACCTATACTGCGCC
CGTCGTGTATACAGGCATGACGCACGGTACGGTACGGTACGGCAGTCGTC
GTACCAAATTTTCACAAAATTTTTCTTTTCGTCGGTAAAATCGCTTAAAT
TTCTTCATTCGCCCTACCAGATTTAAAAAGCTTCCGTCTTTCTTGGTATA
TATCATGTTAGTTTAATCCAGTTTTCATACGTGATCTTTGTTATCTGAAC
CTAACCCTTCAGGCCCGAAAACATATATAATCCGTCTGAAAAACATGTAT
TTTTACTGGATATACTTAACAATTTAGGTCATTGCTCCTGACCATTTAAA
ATTTATAGGAGTATAAACCGACAACTTAGAGAATGGCACCTTTAACCCTT
TAAGTGCCAATGTCGTATATATCAGACATAGGCTATGTAGGAGGGCGAAG
CCCTCCTGTAATGCCCAGTTTGAGTTAGAAATCGTCATTTTCGGTCTAAC
TCGTAGGAATTGGATTGGGCTTCATGGTCAAGCAAAAAAAAAGTGAGTCT
TTTCAGCGAGATTTTAAGCTAAAAAGTAAAAAAAATTGCAAAAATTTGAC
AAAAATCCACTTTTTTAAGATTTTCACCGTTTATTGACCATTTTTGGTCA
ACGAGTGAGCCAAGAACCTTCAAATTTGGCCCTGATTTACTTGATTCTGT
CCTCGAACGAATTAATTTGAAGTTTTACCACTGGCCACCTTTCAATAATT
CAGGCAGATCCGCGCAGCGGGCCTAAATCGGGCGGCGCTGAAGGTGCCTA
AAAGAAAGAGGAGACTCTAAGCTATCCAACGGGCTATAAACGAGCTTCTA
ATTCCTTCTAGATTCGGAGATATAAGCTTTTAAAAAACTTAGAAGAAAAT
GACCGTGGCACTTAATTAATAGATTAGTTAATAGACTAGTTAATTAGTTA
ATAGACTTTAAAAAGCAATAGACTTTTATGTCACTTTTACATCTTTTATA
TCATTTGTGAAAATTCAAAACAAGTGAGGTAAATCAATGCCATAAGTTTC
AATGTTCGATTAGTTAAAGGACTAGATATATATCATATAAAATTTTAAAG
GTTATCTTTTATTTATTAAAAAGCTAAAAAGTTTATCACTCTCAGTTTCG
TGCTCCCACACTAATCATATGATGAACAGAAATGATTGAAAAAATTTAAA
ATTCGACGAAAAAGTTAAAGATTTTATTTTTACATAAGTGTTCCTGTTTC
ATATCAGACACATATTTCATATCAGGACAGTGTCTTGCTATTGTTATATT
ATGCTGATATAAGCAAAAAATGTTTTTTTTCCTCTTTCTGATCAATCTTG
CTCCACATCCGTGTCAATCCAATATGAAAAGCTTGTGAATTAAAATTGAT
GAGTAAGCAAACTATATCTTTCTTATTTAAAAACAAAACCTTTAAAAAAT
AACTTTATAATTGGTGCAATAAAACTAGGCAATAAAAACAATGATGAAAG
CATTAAAAAGTTTAAAAAAATTTAAACAAATCTTGTTCTCCGATTTCAGG
CACCGTATCGAGATCCATTCGCTTGCACCGGGTTCATTGGGATCAAAAGG
AATGGAACCAAAGTGCAAATGGCTCGAGCAGTCTGTGAAGGAATCGCTTT
CAGGTAGCTTTTCATTTCTTTTTTTTTTACAGACACCCAAAAGTATAGAC
ACTCTTTGTTTAAAATCGGAAATAAAGAGAGTTCTTCGTGGAAAATCTAT
GAGCTGTACGTTAGAAATGGGAGGAGGGATGAAGATTTTGAACTCTGAAA
ATTTTGAAAATGGGAGGAATCCTTCTACCAGTTTGTTCGTTAAGTAAGGT
CGTCTCATTAAAGACCTAACCAGTTGAAATAAAACGATGAATGACACTGC
ATTAATATTTATAATCAAAAATAAACTCTTTATCTCAAACTCGAACTTCA
AAGATGTAATTCAAATGAAATCTAGTGATTCGATTATTTTGAATCCTTTT
TTCTTCAGGTTTTTAGAGATGTATAATGTGATGCGAGAGGAAACACACAT
CCCTTTTGAGCCCGTCATCCGGTATGATATCCTCATATAGTTTGTTCTTA
TAAAAAGCTTATAATAGCGAAAAGATCATCGTGATTGCATGGCCGTTGTG
ACTTACTTTGAAAAAGATTTTCGTGCGATCATGTTATAGCATTTTGGTTT
GCATTTGTGGTAGATTAGAAAGCCATGAGATTTGATAAACAACATTGACG
TCATCGGAAGTGTTTTTACTAGGAACACACTATCCAGATTTCTTATAATG
GATTTTCCTAACTGTACAAAGTAACTTAAATGAAGTGAGTTCAAACTTCA
TCCCATCTGGGGGGTTTAAACTCGATGCGTCAAAGTCAACTTAAAAGGAT
TGGTAAGAATATTCAATTTTCGAACAAATTGATATAAAAACATCAAATTT
TTTTTCTTCTTCTTGATAGGTTATGTGGCGGTATCTCGAAGAATGATTTT
ATAATGGAGTTGATCAGCTCATTAGCAGATTGTACCATTGAAAGAGCTTA
TAACCATGATACTTCATGTCTCGGTGCTGCTTGTCTGGCTGGTCTTGCTG
CAGGTACATTTCATTGGTATCATATCTATCCTGAAATCTCTTTACGTTAT
CCTTTTATTTGTAATCTTTTTTCATCTTTTTTAACCGTTTCTCTTCACTT
GTGTCATGGGAGGCGGTCTGCCCGATGGCGTGATTTGAGGCTTTTTACTA
GCTTAATAGAGTGATTCCACTTTTTGGAATGATGCGTAATGCGGCAAAAG
CATTTTCGTTATTTTGGCGTGGTCCATCACGTGGTCCATCACGTGGTCCA
TCACGTGAAAAGGTTTGGGCTCTTATAAGAATCCTTTTTGGTCAAAGTTT
TTTCAGAAGAACCAACCAACTAAATTGCCAATATATTACCGAGGCAGTTC
GCTACATGTAAAAAAAACATGGTCATTTTTGGAGGCCCCAAAACGCTTTA
AGTGATGATGTGGTCGAGGCTTCATTCTAGATTGGTGTGGTGTGCGATAT
GGTGAAAGACTTCAAGCTTGATGTGGCCTTTTCGACCGTGGCCGCCAATT
GCTGCGTGGGTATTTTTTTGTCCGCTTTATCCCACTAAAACCGTTGCAGT
CCTTTTTTCGCACTTAAAGACAATAGCAAAATGTGTCAAAAAAGGATGGG
ATCGAGCTTAAGGGGGGTGATTAAATAATTAGGTGGCACGCGCCTGACCG
CGCGACGTGACTACGGTCGAAAAAGTGTATTTGGGCCTTCTTTTACTTAT
TTTTTGTGTTGGTCGGGTTGCTGTCGGGAAGGGGTCGGGCTCTTTTACAA
ATCGTATAACTCAGATTTTATCTGAAAAGCCGATTTTTTCCTTGGGTCAA
CCAAATGGATTGCCAATGTGTGCCCTTCGCTTCAAATGAAAAGAAAATCA
TCGTTTATTTCTTAGGTGTGTGGAAAGATAAAGAAGAAATGATGCAACAC
ACACAAAAACCGACCATCATCAAACCCGATCCTATCTTGAAACAGAGGTA
TCTACCCATCTATAAAGAGTGGAAAACAGCTGCCAAAAGATGTCTCAAAT
GGTACACCTGATGATGGTGGAAGCGAGGCTTGATATACATGCAAATGAGG
CTGGTTATACGAGGTTTGTCATGTTTAGGTCTTTAGATAACTTACGGAGT
ATGTATATATGGAATATATATTTTTCAAGCTGTGTTTTTTACAATCCAAG
TATATTCAAGTAATTAGTGCAATATTCAACATGTAGACATCTTTTTTGTA
ATTGTGACTTTCCATTAGCAAGAGGTTGCTACTCAGCACACCTACTTTCG
AATGTGTCGGGTAGAGTTTCAATGAAGGGAACCATGGGTCATTATCAAGG
AGTTGCTACTCAGCACACCAACTTTCGAATGTGTCGGGTAGAGTTTCAAT
GAAGGGAAGTATTTCAATATGTGAAAGTCACGATAGCTTTGATGTCATTC
AATATCAATGTAATAATAGCTAGTGAGGCTTTATTTATATTTGATAACTC
ATGCAATCATACTCCTGTGTAATGATATCGAGTTGTGAGTTTTTTGACAT
TCATATCAGAAGAGCTGGAGTGGCTTTGTTTGTAGTTTGACTGTAAGGTG
TCTTCTTTTAAATTTGTACACAAGCTTCAAAGTGTGTTGCCAAGGTCTCA
GAACCTCCTTTTTCTCATCACATAAATGGGCCCCCAGCGGTTTGCGTGAA
TGCGTGAATGGGCTTTTTCACATGCGTGAATGCGTGAATTAGAAAACTTC
GCTTGAACAGAAGTTGGAAAAGAATTTGCCTGATTACCTGAACTGAAGGT
CTTCTTGGGGGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_011584XLOC_011584Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00020653-exon-sc0000359-1575043694:288902..288967TCONS_00020653-exon-sc0000359-1575043694:288902..288967Clytia hemisphaericaexon
TCONS_00020653-exon-sc0000359-1575043694:288358..288418TCONS_00020653-exon-sc0000359-1575043694:288358..288418Clytia hemisphaericaexon
TCONS_00020653-exon-sc0000359-1575043694:286660..286786TCONS_00020653-exon-sc0000359-1575043694:286660..286786Clytia hemisphaericaexon
TCONS_00020653-exon-sc0000359-1575043694:286125..286229TCONS_00020653-exon-sc0000359-1575043694:286125..286229Clytia hemisphaericaexon
TCONS_00020653-exon-sc0000359-1575043694:285407..285457TCONS_00020653-exon-sc0000359-1575043694:285407..285457Clytia hemisphaericaexon
TCONS_00020653-exon-sc0000359-1575043694:284939..284982TCONS_00020653-exon-sc0000359-1575043694:284939..284982Clytia hemisphaericaexon
TCONS_00020653-exon-sc0000359-1575043694:283065..283168TCONS_00020653-exon-sc0000359-1575043694:283065..283168Clytia hemisphaericaexon
TCONS_00020653-exon-sc0000359-1575043694:282647..282709TCONS_00020653-exon-sc0000359-1575043694:282647..282709Clytia hemisphaericaexon
TCONS_00020653-exon-sc0000359-1575043694:282115..282248TCONS_00020653-exon-sc0000359-1575043694:282115..282248Clytia hemisphaericaexon
TCONS_00020653-exon-sc0000359-1575043694:280356..281252TCONS_00020653-exon-sc0000359-1575043694:280356..281252Clytia hemisphaericaexon
TCONS_00020653-exon-sc0000359-1510915933:288902..288967TCONS_00020653-exon-sc0000359-1510915933:288902..288967Clytia hemisphaericaexon
TCONS_00020653-exon-sc0000359-1510915933:288358..288418TCONS_00020653-exon-sc0000359-1510915933:288358..288418Clytia hemisphaericaexon
TCONS_00020653-exon-sc0000359-1510915933:286660..286786TCONS_00020653-exon-sc0000359-1510915933:286660..286786Clytia hemisphaericaexon
TCONS_00020653-exon-sc0000359-1510915933:286125..286229TCONS_00020653-exon-sc0000359-1510915933:286125..286229Clytia hemisphaericaexon
TCONS_00020653-exon-sc0000359-1510915933:285407..285457TCONS_00020653-exon-sc0000359-1510915933:285407..285457Clytia hemisphaericaexon
TCONS_00020653-exon-sc0000359-1510915933:284939..284982TCONS_00020653-exon-sc0000359-1510915933:284939..284982Clytia hemisphaericaexon
TCONS_00020653-exon-sc0000359-1510915933:283065..283168TCONS_00020653-exon-sc0000359-1510915933:283065..283168Clytia hemisphaericaexon
TCONS_00020653-exon-sc0000359-1510915933:282647..282709TCONS_00020653-exon-sc0000359-1510915933:282647..282709Clytia hemisphaericaexon
TCONS_00020653-exon-sc0000359-1510915933:282115..282248TCONS_00020653-exon-sc0000359-1510915933:282115..282248Clytia hemisphaericaexon
TCONS_00020653-exon-sc0000359-1510915933:280356..281252TCONS_00020653-exon-sc0000359-1510915933:280356..281252Clytia hemisphaericaexon
TCONS_00020653-exon-sc0000359-1491911889:288902..288967TCONS_00020653-exon-sc0000359-1491911889:288902..288967Clytia hemisphaericaexon
TCONS_00020653-exon-sc0000359-1491911889:288358..288418TCONS_00020653-exon-sc0000359-1491911889:288358..288418Clytia hemisphaericaexon
TCONS_00020653-exon-sc0000359-1491911889:286660..286786TCONS_00020653-exon-sc0000359-1491911889:286660..286786Clytia hemisphaericaexon
TCONS_00020653-exon-sc0000359-1491911889:286125..286229TCONS_00020653-exon-sc0000359-1491911889:286125..286229Clytia hemisphaericaexon
TCONS_00020653-exon-sc0000359-1491911889:285407..285457TCONS_00020653-exon-sc0000359-1491911889:285407..285457Clytia hemisphaericaexon
TCONS_00020653-exon-sc0000359-1491911889:284939..284982TCONS_00020653-exon-sc0000359-1491911889:284939..284982Clytia hemisphaericaexon
TCONS_00020653-exon-sc0000359-1491911889:283065..283168TCONS_00020653-exon-sc0000359-1491911889:283065..283168Clytia hemisphaericaexon
TCONS_00020653-exon-sc0000359-1491911889:282647..282709TCONS_00020653-exon-sc0000359-1491911889:282647..282709Clytia hemisphaericaexon
TCONS_00020653-exon-sc0000359-1491911889:282115..282248TCONS_00020653-exon-sc0000359-1491911889:282115..282248Clytia hemisphaericaexon
TCONS_00020653-exon-sc0000359-1491911889:280356..281252TCONS_00020653-exon-sc0000359-1491911889:280356..281252Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000359supercontigsc0000359:280356..288967 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.764363	1.06578e-06	0.722697	0	19.0565	14.6066	1.5712	0.00214708	0.916002	2.35587	1.85161	0.551946	3.97402	0.796831	9.83933e-10	1.49692	2.0837	1.90316	1.26664	0.0277082	0	0	0.441537	0	0	0	0.697974	0.492855	0.000264729	1.31522e-09
Blast
[Close]
BLAST of TCONS_00020653 vs. Swiss-Prot (Human)
Match: GLPK5 (Putative glycerol kinase 5 OS=Homo sapiens GN=GK5 PE=2 SV=2)

HSP 1 Score: 220.705 bits (561), Expect = 5.485e-64
Identity = 122/299 (40.80%), Postives = 177/299 (59.20%), Query Frame = 2 
Query:    2 WS-LLCRIFDIPQQMAPDVIDTSGHILDVPEEIFGASFPLTSVVADTQATVFGLNGFNAGDACAVLGTGSFLMVNTGNYCHASVKGVYPQIGWQIKDEVALICEGNITGIAPSIEWAREIGLYENVNELSDFVKTVEGTDGMYFIPAFNGLSAPYRDPFACTGFIGIKRNGTKVQMARAVCEGIAFRFLEMYNVMREETHIPFEPVIRLCGGISKNDFIMELISSLADCTIERAYNHDTSXXXXXXXXXXXXXVWKDKEEMMQHTQKPTIIKPDPILKQRYLPIYKEWKTAAKRCLKWY 895
            WS ++  +  IP  + P V DTS +   V EEIFG   P+ ++VAD Q+ +FG   F  GD    +GTG+FL +NTGN    +  G YP IGW+I  EV  + E N      +I+WA+++ L+ +  E     K++E ++G+ F+P+F+GL AP  DP+AC  F+G+K + +K  + RA+ E IAFR  ++Y +M++E HIP    IR  GG+ KN F+M++ S L +  I+R  + D SCLGAA LAGLA G W DKEE+ +  Q   + KP     Q Y    + W  A KR + WY
Sbjct:  230 WSGMITSLISIPLSLLPPVRDTSHNFGSVDEEIFGVPIPIVALVADQQSAMFGECCFQTGDVKLTMGTGTFLDINTGNSLQQTTGGFYPLIGWKIGQEVVCLAESNAGDTGTAIKWAQQLDLFTDAAETEKMAKSLEDSEGVCFVPSFSGLQAPLNDPWACASFMGLKPSTSKYHLVRAILESIAFRNKQLYEMMKKEIHIPVRK-IRADGGVCKNGFVMQMTSDLINENIDRPADIDMSCLGAASLAGLAVGFWTDKEELKKLRQSEVVFKPQKKC-QEYEMSLENWAKAVKRSMNWY 526
The following BLAST results are available for this feature:
BLAST of TCONS_00020653 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GLPK55.485e-6440.80Putative glycerol kinase 5 OS=Homo sapiens GN=GK5 ... [more]
back to top