TCONS_00020644 (transcript) - C. hemisphaerica

Overview
NameTCONS_00020644
Unique NameTCONS_00020644
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4059

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00020644 ID=TCONS_00020644|Name=TCONS_00020644|organism=Clytia hemisphaerica|type=transcript|length=4059bp
TGGTCCGGCCGGTTTGGATGGAAAGACTTTCGATGAAGCGAGAGACATTT
GTGAGAAATTGGGCGGTGATTTGGTTTCTATTGGGTCAGCCAGTGAAGGA
GATGCAGTTCTTTATGAAGTCAGGAGAGAGCCAGTAGTGAACGTCGCATA
TTTCAACGGCTTACAACGGACGTCCGACACGGCATACAAATGGACGGACG
GCACGTCGTTCGGTTACAGCCAAATCGATCAAGATGAACCTTTCAACAAA
CGGCAACAATGCGTTCTCATGGTGGCCAAAGATGGCGGACAATTCGCATG
GGTGGCCGCCCGATGTGACAACGAAGAAGGATTCATGTGCAAAAGAGAAA
ATGTCAACGACAAACCACtcgaattaaaattaaaatccaACGAATTCGAT
TCACTCACTTTCCAACTTCCAACCACCACATTAAACCGGCAACCGAAATA
TTTCGTCGAAATCATCGATTCAGAAGGAGGACGTCGAACATTAACCGTCT
CCAGCGACGACGGAGAATTTACCGTCAACAAACTGACGGAAGATGACGAG
TATGACATCACAGTTCAAGAAGATTTCTTTGGCCTTGGTCCCAAAACGAA
ACAAGAAATATTCAGGACGGCTCGATTCAtttctccGAAAGCAGTTAAAG
AATCGAACGACAAAAAGGTGCGATATGCAGAGTCACAGAAGCGAGAGATC
GAATGGAAATACGGAGATCTGGGAGACAGTTTATTAGAAAATGTCAAAGT
TCGCGTACGTTTCTGTTATTTCGCCAAGTGTGACTTTGTAGATTTCAATG
GAACAAAAGGAGTGTTGGAAGACCTGAGAGCAGACACCAAATATAATTAC
ACGCTTCAAGTGTACGATACCAAGTATTTGAAATCGGGGAAAATTGCAGA
AGCAAAAGAATTCCGAACGGATGAACAAGACACGTGTCGAGATGATGAGT
GGTTATGTGCAGGAGGATCCAAATGCATCAAGCAAGAGCAACGATGTGAT
AACAAATTTGATTGTCCAAGTGATATTCCCGGTAGAGCTGTGGATGAACA
GAAAATCGCTGGCTGCTCACCACCAGAGGAGGTCGAGATCGGCAAAGTTA
TCGGAGGATTGAATTTCTTGAAGATTCATTGGAAATCACCTACTAAAGAT
CAACGCGTTCGCGGCTACACGCTTCTTGTGAATAACAAAACAAGACACTC
TATCTCAGGAAATACAACTTCATTCCGTGTTAGCAATTTGAAAGAAGGTA
GCCTAGTGACCTACTCTCTTTCCGCGTTCAACCCAACTGGTGATGGAGAA
AAAGTGACTAGTAACAAGAAACTAGCTAACGAAAGTGCACCAACAACTGC
CGTCCAAAACTTGAAGGCTGATGACGTCAAATCGAACGAGAAAAACCAAC
GCAGAATCAGTTGGGAAATCCCCTCTAAACTAAACAACAATGACCCAGAA
ACAATACAGTACGACATCAAGTTATGTTACACTAATCAAAAGGAGAAGTC
ACAAACATGCGATGAAAAATCTGTCACCAATAAATTACATTATATTATCC
AATCCTTGAAACCGAGCAAGAACTACAGCGTGGTTGTCACAGCAACGAAT
GAATATGACCAATCCAGCGCGCCATCAAATGAGATCCGCTTCAAAACGAC
TTTATGTAATAGCAATGAGTTTGAATGCAAACTTGACGGAACATGTGTCA
GCAAGAATGCGACTTGTGATGGAAAGAAAGATTGCAAAGATGCAGCAGAT
GAAAAGAAAAGCGCTGGATGCTCATTATCACCGAACGTTGTGATCGAAAA
AGAGAATCTGGGAATCTCATCTATAGCCATCAAATACCACAAACTGGAAC
GTGTAGCCAATCAAATCGTGTTCACACTTACCACAAAAGAAGGATCTTTC
TTACAAGAAGAAGTCGTTAAAGGAGGAGATGTTTTGAAAGATGGCGTGGT
CACATTCACTAAAGGAGTGAAAGCGAACTCAGAATACAAAGTCAAGGCAG
TGGTTTATAATTTCATTGGCAAGAATAAGGGAACGGTTTTGGAAATCGAG
ACACCAGAAAAGAATGCACCAGCAGGCAAGCCACAAAAGATCGAGTTCAA
AACAACAGAAAACGAAGAATCATCCAGCGTCCAAGTGTCATGGAAAGCAC
CCTTCGTCACCGGTGGAAAAGCGAAAAACCAACTCAAATATAAAATACGA
GTCTGTATAGACGGTACCGAAGATtgcaatgacgtcatcagcgaGGAAGG
CTCCACAGAGAGATTGGTTGATGGATTGAAACCTGACACGCAGTACCGCT
TCAAAATCTCCGTCTTTTCTGGCGAAGATGAACGAGGCGATGAACAAAAA
GCAAGTTATAAAACTTTAGAGAAAGACACGTGTAAGGATGAAACTTACTA
TCGCTGTCCAATCAAATGTTTGAATCCCAATCGTGTATGTGACGGAATCA
TTGATTGCATCGATCGATCTGATGAATCCAAAGCTGCCAAATGCTCTGCA
CCAGAGAAGATAGAGAAAGTCAATGTCGAAGCTTCATGGAATTCGTTGAC
TTTCAAATGGGAGGAGCCAGCCAACAACCCAATTGAATACCATCTCACTA
TGAAATGCACTGTCAACGATGTAGAATCTCCTTTGGTTGAAACCACGATT
CCCAAGAAGGAGCAATCCTACACCTTTGAAGGGTTGACAGAAAATGAAGA
CAAAGCAACTTGTGAATTTGGAATCATTCCAAGTAATTTGATTGGAGAAG
CAAAACAGTTCAAAGGTGTTTACAAGACCAAAACCTTAGGAACACCATCA
AAACCGAAAGAAAGTAAAGTGACCAAAGTTGATGGTTTTGAAACGAAGCA
AGTCAACCTAGAATGGGAAGCTccttccaaccttggaaatgcACGTGCCA
AAGAAATCAAATACAAATTACAATGGTGCAGAACGGAAGAAGATTGCAAA
GATAAGACTGTCGATGGGCAATCTGCGACATTGAAAGATTTGAAGCCTGG
GACTGAGTATGATGTGGAAGTCACTGCAATCAACCCACTTGGAAAATCTG
GTGAACCATTGAAATTCGTATTCTCAACTGCTGATAAAGACACACTTCCA
TCACCGCCACAAAACGTCAAAGTCACCAAACACCCGGATCATCCAAACCA
GAAAGCCATTGTGCAATGGGAAACACCAAAAGACAAAAATGGCCttgaaa
aacttcaaatcaaataCAGAATCGAATACTGTATAAAACCTGTCAAGGAT
TGTCGCATAATTGAAATTGACACAGGAACTCAAAACTACACTATTGTTGA
TATGGAAGGTGGACAATCGTATGGTATCAGAGTGGCCGCTTTGGGACGAA
GTGGTGCTTTTGGAGATTATTCTGCTAAATACTTCCATACAACTGAAGGA
TCAGCCAGTTCAGGCTTAGCATCATGGGAAATTGCTTTGATCGTGGTCGC
CATACTTTTAATCATTGTCATCATTCTTGCACTTGTCATCCGAGCTGTTT
ACAAATCTCGATCTGCCAAGTCATATGAATCTACCGGTGGAAACGaaaaa
gcaaaaatgaatggaGGATATCAAGCTGatgaaaaagtttaaagtgaaaC
ATTCAATACTGCAGTGGACTTGGAAATAGACTTATGAAAAGAAGAATTCA
actcaaaataaatttcaaagaacAAAATGACTTGActtaataaaattaaa
aacataatttagaGTTCAAAAGAATTCAGATCTAGATTGGACATTGCCTt
tcttgaaagaaaatacaaaataactcAAATTCTTTTCAATCGTATTATCC
CTTTTTAGCCctatttcattcaaaataatcaattatttgaatttgaattt
taggAGTTGCTGGAAATTTACTCcgttttttattattatttcatGACATA
AACATGACATGAGTTTGCTAAAAGTAAAACGAAAGAAAACACAAAACATT
GTATATATGATAATTCTattattttactatttttattatttttatattga
gTCTAAAtacatttttgaagtttctcatttttatacttATTGTTCacctt
taatttttt
Run BLAST on NCBI

transcript from alignment at sc0000359:53226..63364-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00020644 ID=TCONS_00020644|Name=TCONS_00020644|organism=Clytia hemisphaerica|type=transcript|length=10139bp|location=Sequence derived from alignment at sc0000359:53226..63364- (Clytia hemisphaerica)
TGGTCCGGCCGGTTTGGATGGAAAGACTTTCGATGAAGCGAGAGACATTT
GTGAGAAATTGGGCGGTGATTTGGTTTCTATTGGGTCAGCCAGTGAAGGA
GATGCAGTTCTTTATGAAGTCAGGAGGTAGGAAGCCCATAACAGAGACCA
TAACACCCATACTTTCAAAAAGGAAATTTCCTTTGTTAGATTTTAAACAG
AGAGACCCTATGAGTGATGAACTAATTTGGAATAACTAAACTTTCAAGAT
TATGAGCAAATTCAATCGGAAGGTTTTAAATAATTTTGAAGCGAAATCAT
AACAATTAAGTAGGAGAGATTTTCGAGACTGTTTGAGATTCCAAAATTAC
AGAAATAGAGTAGTGAGATCAGGGACACTCACAAACTTGGAAGACTACGA
AATAAATGTCCGTAAGGCAAAGTATATTAGTGACGACAAACAAAGAGCAT
TTTTTTTCTTAATTTACAGAGAGCCAGTAGTGAACGTCGCATATTTCAAC
GGCTTACAACGGACGTCCGACACGGCATACAAATGGACGGACGGCACGTC
GTTCGGTTACAGCCAAATCGATCAAGATGAACCTTTCAACAAACGGCAAC
AATGCGTTCTCATGGTGGCCAAAGATGGCGGACAATTCGCATGGGTGGCC
GCCCGATGTGACAACGAAGAAGGATTCATGTGCAAAAGAGAAAATGGTAA
TTGAAATTTATCGATTAATCGAATCAAGTTATTCGAATTAATCGAATCGA
ATTAAAGAAATCTTTATGGAGCAAGCCAACGGTCAATGAACCTCTGAGTC
ATTGAAATCCATCATGGAAAAAAGAGTCCCTGCTGAACTTTAACTTTAAA
CAATAACAAGGCAAAAACAACAACACTTTCTTTCAATAAATGAGGTTTCT
TTCTCCTCACTAAAATTTATACTCAACGCAATTTTTGTTTATTTATCAGT
CAACGACAAACCACTCGAATTAAAATTAAAATCCAACGAATTCGATTCAC
TCACTTTCCAACTTCCAACCACCACATTAAACCGGCAACCGAAATATTTC
GTCGAAATCATCGATTCAGAAGGAGGACGTCGAACATTAACCGTCTCCAG
CGACGACGGAGAATTTACCGTCAACAAACTGACGGAAGATGACGAGTATG
ACATCACAGTTCAAGAAGATTTCTTTGGCCTTGGTCCCAAAACGAAACAA
GAAATATTCAGGACGGCTCGATTCAGTAAGCACCTTTCCACTGTTTGTCT
TTTTATTAGCAAGTTTATGTATGTGTGTTTTTCTGAGACGGATAGCTTCT
AAATTGTCTAAAACCTGATCATTTGAGGACGATATTGATTTTTTAGCGCC
CTTGCTGATTTTGCGGGTCAAAACTGTGGGTTATTTCATATCACTTCAGT
CACTCCGATGCCCTCGAAAGTACAAATACATAAACTCGCTATTGTATGTA
ATCTCATGGGTCAATAAAATAAGTGAAGCACATTGGAAGCTTCAGAAGAT
TTTATAACGAATCTGTTTCCATATCAATTCATCAATGCGACAGATATAGA
AATTAAGATTATGTATACTTGAATTGACAAAGAAATGTTTTAAGTCGAAG
CCATTTACACACATAGCATAAATATGAGCTTAGATACTTTAATTGTAAAA
AAACAAATTACACCATTTCTTTTTTCAGTTTCTCCGAAAGCAGTTAAAGA
ATCGAACGACAAAAAGGTGCGATATGCAGAGTCACAGAAGCGAGAGATCG
AATGGAAATACGGAGATCTGGGAGACAGTTTATTAGAAAATGTCAAAGTT
CGCGTACGTTTCTGTTATTTCGCCAAGTGTGACTTTGTAGATTTCAATGG
AACAAAAGGAGTGTTGGAAGACCTGAGAGCAGACACCAAATATAATTACA
CGCTTCAAGTGTACGATACCAAGTATTTGAAATCGGGGAAAATTGCAGAA
GCAAAAGAATTCCGAACGGATGAACAAGGTATTATTTCAATTACACGATG
TTAAATGTTCTTTTTGCTTGCATAAAAACTATCTCATGTAAAACTCATCT
TAGGTTGGATCTTCTAAACGACTGAAGTATTGTTATAAATCAAAAGCAGT
TGGATATACGAGAACAATTTCATAAAACATTTCATAAATCTTTTGATAGA
TAGTATAATTTGTTCATCAAAAACACTTAAAAAGTATCCCAGAAATTACA
GAAATACGCGAAAATTAAAAGGTGCGCGAAAATTAGAGGCGTGGAAATTG
TTTGGATTAAAGTACAATTTTCAGGGAAAGAAATACACAATTTGGATTAA
AGTATGTATTAATTCAACCCCTTCATTTCGATCTTCTTGCAGACACGTGT
CGAGATGATGAGTGGTTATGTGCAGGAGGATCCAAATGCATCAAGCAAGA
GCAACGATGTGATAACAAATTTGATTGTCCAAGTGATATTCCCGGTAGAG
CTGTGGATGAACAGAAAATCGCTGGCTGCTGTAAGTCTATAAATTTAATC
TTCGGTGATCTCNTTGCTGTAAGTGTGTTTTCAAGTCTGTTTTCTTTGTT
CTCTTAAAGAAGATTTGTTAAATGGTATAACGCACGATAAACAACAAAGT
GAAGGGTACCAGAAGTTAACTTTGACACTCAAAATCATTATTATATACTA
CTGAGCCAAAATTACATTTGACCATTCTAAAATTGATTGTTAAACACGTT
CCAGTGTATGCAAGGCTTTATAACGCTACTAGTCTGTTCCATGTAATATC
CTGGTGCCATCAAGGACGCCGATGATACACTGGGTACGAGGTTAAAAACA
AAGGTTAGGCACAGAACAGTAAAAGTTAACTTTACCACTACAAGAGATGA
TTATATTNCATCTTCGGTGATCTCAAACAATTGCTTTAAGTCACTTTCCC
ATGTCTCAGGCAAAAATTTAAGCATATGCTAAGCATTACTTGTTCATTCA
TTTTCCGATTTTGGCGGGAAGATTTTTCATAATTTTCCTAAAGTTTTGCG
AGTCAGTTTTCGGATTTTTGAATAAAAACATGTACAACACTAAAATTCAG
CTCTTAATTACTCACAACTTATGAAACCATTATTTGTAGCACCACCAGAG
GAGGTCGAGATCGGCAAAGTTATCGGAGGATTGAATTTCTTGAAGATTCA
TTGGAAATCACCTACTAAAGATCAACGCGTTCGCGGCTACACGCTTCTTG
TGAATAACAAAACAAGACACTCTATCTCAGGAAATACAACTTCATTCCGT
GTTAGCAATTTGAAAGAAGGTAGCCTAGTGACCTACTCTCTTTCCGCGTT
CAACCCAACTGGTGATGGAGAAAAAGTGACTAGTAACAAGAAACTAGCTA
ACGAAAGTGGTACGTATCTTATTTGTTTACAAAGTGTTTGTGTTCAACAT
GTCAGAGTCATCTTTCCGTTGCAAAATGATTCCACCTTTTGGCGCCAGAG
TCTCGATCATGCCTGGCAATAATAAAGTAGTGTCAGTGAAATTGATATGA
ATTAACATACGATGTTTATGTTAACATTTTCTTAAGAAATCTAAGACAAT
TGAAAACTGAAGCAAAAATGATGTCATAACATTTAACCATCGCTATTCAA
TTTTCTTGTACAGCACCAACAACTGCCGTCCAAAACTTGAAGGCTGATGA
CGTCAAATCGAACGAGAAAAACCAACGCAGAATCAGTTGGGAAATCCCCT
CTAAACTAAACAACAATGACCCAGAAACAATACAGTACGACATCAAGTTA
TGTTACACTAATCAAAAGGAGAAGTCACAAACATGCGATGAAAAATCTGT
CACCAATAAATTACATTATATTATCCAATCCTTGAAACCGAGCAAGAACT
ACAGCGTGGTTGTCACAGCAACGAATGAATATGACCAATCCAGCGCGCCA
TCAAATGAGATCCGCTTCAAAACGACTTTATGTAATAGCAATGAGTTTGA
ATGCAAACTTGACGGAACATGTGTCAGCAAGAATGCGACTTGTGATGGAA
AGAAAGATTGCAAAGATGCAGCAGATGAAAAGAAAAGCGCTGGATGCTGT
AAGTGTGTTTTCAAGTCTGTTTTCTTTGTTCTCTTAAAGAAGATTTGTTA
AATGGTATAACGCACGATAAACAATAAAGTGAAGGGTACCAGAAGTTAAC
TTTGACACTCAAAATCATTATTATATACTACTGAGCCAACATTACATTTG
ACCATTCTAAAATTGATTGTTAAACACGTTCCAGTGTATGCAAGGCTTTA
TAACGCTACTAGTCTGTTCCATGTAATACCCTGGTGCCATCAAGAACGCC
GATGATACACTGGGTACGAGGTTAAAAACAAAGGTTAGGCACAGAACAGT
AAAAGTTAACTTTACCACTACAAGAGATGATTATATTTTATAAAGCCAAG
AAATTGAACTAAGTTACTCCCTAAAGAACAATTATTCAATAGTTCTATTT
AACCCTTAGAACTAAAAGGGGGGCACATAGTGCCTTTGTGCCCCCCTCTC
AGTAGGTAGGGTTAAACCATCCATCTCATGTTTTACTAATCTGAAATGTA
CTTTCCTTCCCATAGCATTATCACCGAACGTTGTGATCGAAAAAGAGAAT
CTGGGAATCTCATCTATAGCCATCAAATACCACAAACTGGAACGTGTAGC
CAATCAAATCGTGTTCACACTTACCACAAAAGAAGGATCTTTCTTACAAG
AAGAAGTCGTTAAAGGAGGAGATGTTTTGAAAGATGGCGTGGTCACATTC
ACTAAAGGAGTGAAAGCGAACTCAGAATACAAAGTCAAGGCAGTGGTTTA
TAATTTCATTGGCAAGAATAAGGGAACGGTTTTGGAAATCGAGACACCAG
AAAAGAATGGTGAGTTGTTGAAATGAATNGTGCAATAGCGATGAGTTTGA
ATGCAAACTTGACGGAACATGTGTCAGCAAGAATGCGACTTGTGATGGAA
AGAAAGATTGCAAAGATGCAGCAGATGAAAAGAAAAGCGCTGGTTGCTGT
AAGTGTGTTTTCAAGTCTGTTTTCTTTGTTCTCTTAAAGAAGATTTGTTA
AATGGTATAACGCACGATAAACAACAAAGTGAAGGGTACCAGAAGTTAAC
TTTGACACTCAAAATCATTATTATATACTACTGAGCCAAAATTACATTTG
ACCATTCTAAAATTGATTGTTAAACACGTTCCAGTGTATGCAAGGCTTTA
TAACGCTACTAGTCTGTTCCATGTAATATCCTGGTGCCATCAAGGACGCC
GATGATACACTGGGTACGAGGTTAAAAACAAAGGTTAGGCACAGAACAGT
AAAAGTTAACTTTACCACTACAAGAGATGATTATATTTTATAAAGCCAAG
AAATTGAACTAAGTTACTCCCTAAAGAACAATTATTCAATAGTTCTATTT
AACCCTAAGAACTAAAAGGGGGGCACATAGTGCCTTTGTGCCCCCCTCTC
AGTAGGTAGGGTTAAACCATCCATCTCATGTTTTACTAATCTGAAATGTA
CTTTCCTTCCCATAGCATTATCACCGAACGTTGTGATCGAAAAAGAGAAT
CTGGGAATCTCGTCTATCGCCATCAAATACCACAAACTGGAACGTGTGGC
CAATCAAATCGTGTTCACACTTACCACAAAAGAAGGATCTTTCTTACAAG
AAGAAGTCGTTAAAGGAGGAGATGTTTTGAAAGATGGCGTGGTCACATTC
ACTAAAGGAGTGAAAGCGAACTCAGAATACAAAGTCAAGGCAGTGGTTTA
TAATTTCATTGGCAAGAATAAGGGAACGGTTTTGGAGATCGAGACACCAG
AAAAGAATGGTGAGTTATTGAAATGAACCGATAAAAAAATATCAATCCGC
AAAGACAGAAATGGGCTAAACTTTTCCAGGTTTTGATCTAGATGCATTCA
TTTTAGCAGCAAAATTCAATAAATTTTCAGTTAATTTTGCCTCCATCCAA
TTAAATCATTGAACACATCCAAACACACTTTAAGTCAATATCTCCATTTC
TCTGTCTCTCGCCAACACAGCACCAGCAGGCAAGCCACAAAAGATCGAGT
TCAAAACAACAGAAAACGAAGAATCATCCAGCGTCCAAGTGTCATGGAAA
GCACCCTTCGTCACCGGTGGAAAAGCGAAAAACCAACTCAAATATAAAGT
GAGTGAACTTCATTTTTCATTTTTAAAAAATCTAGAAGGAATCTGTTTGA
CAAAAAACTATAGCAAACAGAGAGCCAAATAAGAAAAAAAAGTCTACTTT
ATGGCAACAAAACGCAACAAAATACAAATATCATAACAATTTTCTTTCTG
CTACCATCTTTAGATACGAGTCTGTATAGACGGTACCGAAGATTGCAATG
ACGTCATCAGCGAGGAAGGCTCCACAGAGAGATTGGTTGATGGATTGAAA
CCTGACACGCAGTACCGCTTCAAAATCTCCGTCTTTTCTGGCGAAGATGA
ACGAGGCGATGAACAAAAAGCAAGTTATAAAACTTTAGAGAAAGGTATGG
TTCGCTTTGTTTATCAATTCATCCCGATTCACATAGGGTCCAGCCCCCAG
CGTTTTTCAGGGGGAGACTAAGCTTCTTTTCTTTTCGGACTGAGACACAA
AAAGATATTCCCAAAAACATTTCAAACTTCAGCCTCATAATAAAATGCTT
TCACTGACAATAATAATGATGATTTTATTTCAGACACGTGTAAGGATGAA
ACTTACTATCGCTGTCCAATCAAATGTTTGAATCCCAATCGTGTATGTGA
CGGAATCATTGATTGCATCGATCGATCTGATGAATCCAAAGCTGCCAAAT
GCTGTAAGTGAAAAATGCATCAATGATAAAATTGAATTCAATTCATGATA
TGCAACCTTTACAATGTCTTCTATTTCTAACATTTCATCACGAACCCAAC
AGCTGATTGGTTGCTAGTGATGTATTGACTGATTTTACGTCACTTACAAC
CAATCAGCTGTTAGATCTATGGTGTGATGTTGAAGACATTGCAGTGATGC
ATATCATGAATTGAAGAATATATTTGGGTCATAAACCTCTGCAATGTCTT
CTGACATTAAGTCACTATTGCAACAGCTGACTGGTTGTAAGTGACGTGTT
GGGCAGAAAAGCCAGAATTTGTGATGATAAATTTGTGAAGCCATTGCAGG
TGCATATCGTGAAAACCTTAATGAAATTTGAGCTGCTACTTTTGGATCCG
AGTCGAACTATATATCGAACTAAAAAAAACACACCATAAGGCAAGATAGG
AATGTTAAAGAAACCAAAAACTGCAATAATCTTGAAAGTAATGGGTGAGT
TTTGAAAAAGTTATTTTAATAAATCTTATCAATTTGTTTTCCAGCTGCAC
CAGAGAAGATAGAGAAAGTCGATGTCGAGGCTTCATGGAATTCGTTGACT
TTCAAATGGGAGGAGCCAGCCAACAACCCAATTGAATACCATCTCACTNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNGGAATGTTAAAGAAACCAAAAACTGCAATAATCTTGAAAGTAA
TGGGTGAGTTTTGAAAAAGTTATTTTAATAAATCTTATCAATTTGTTTTC
CAGCTGCACCAGAGAAGATAGAGAAAGTCAATGTCGAAGCTTCATGGAAT
TCGTTGACTTTCAAATGGGAGGAGCCAGCCAACAACCCAATTGAATACCA
TCTCACTATGAAATGCACTGTCAACGATGTAGAATCTCCTTTGGTTGAAA
CCACGATTCCCAAGAAGGAGCAATCCTACACCTTTGAAGGGTTGACAGAA
AATGAAGACAAAGCAACTTGTGAATTTGGAATCATTCCAAGTAATTTGAT
TGGAGAAGCAAAACAGTTCAAAGGTGTTTACAAGACCAAAACCTTAGGTA
AGGACCTTCCAAATTAATTTGAATCGCATAACATCTGAGCAAAGCAAGGA
GGTTCTGATATTTCTTTTAATAAAAAACATTTAGAGATATTAAAACCATA
AAACATTCTAAATAGCGAAAACATTCTAAATAGCGAACAAGTTAGTTCTA
AGTTAGCCAGAAATAAGACGAAAACCTGAGATACCAGGTAGAAAACTATC
TCACATCTTCTGCTTCATAGGAACAATTCTGTTCTAAGTTATCAAGAAAT
AAGACAAAAACCTGAGACAGAAGTTCGTCTACTACGAACTAGTGTAATAG
CAACGAACCGATAGCACAGTTGGGAGAGCAATCGCCCGGCAAGCGAGAGG
TCGTGGGTTCAATTCCCACTCGATTCNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNGGGTTCAATTCCCACTCGATTCGTTACCTTT
GAGAAAACTGGGAAGTACATTAGTGCAGGATCCGTTGATTCATTACCTAT
AAGTAATACGCACTTGATTTCACACTGAGACAGAAGATTATCTCAAATCT
TCTTTTTCTTCGTAGGAACACCATCAAAACCGAAAGAAAGTAAAGTGACC
AAAGTTGATGGTTTTGAAACGAAGCAAGTCAACCTAGAATGGGAAGCTCC
TTCCAACCTTGGAAATGCACGTGCCAAAGAAATCAAATACAAATTACAAT
GGTGCAGAACGGAAGAAGATTGCAAAGATAAGACTGTCGATGGGCAATCT
GCGACATTGAAAGATTTGAAGCCTGGGACTGAGTATGATGTGGAAGTCAC
TGCAATCAACCCACTTGGAAAATCTGGTGAACCATTGAAATTCGTATTCT
CAACTGCTGATAAAGACAGTAAGTAAACCACTCATAATTTCTATTAAGAT
TTAAAATCATCATAACTTCAAAATATCATCGATAGGAAACTCTTACTTTA
ATTAATACTTGGCACGGTTAGATGAGCACACTCGTTCAATTGAATTTTAT
TACAATTTTTTCTTTCATTGTAGCACTTCCATCACCGCCACAAAACGTCA
AAGTCACCAAACACCCGGATCATCCAAACCAGAAAGCCATTGTGCAATGG
GAAACACCAAAAGACAAAAATGGCCTTGAAAAACTTCAAATCAAATACAG
AATCGAATACTGTATAAAACCTGTCAAGGATTGTCGCATAATTGAAATTG
ACACAGGAACTCAAAACTACACTATTGTTGATATGGAAGGTGGACAATCG
TATGGTATCAGAGTGGCCGCTTTGGGACGAAGTGGTGCTTTTGGAGATTA
TTCTGCTAAATACTTCCATACAACTGAAGGTTAGTAAACTATCCATATTT
GCAGTCCTCAAAATCAGTGTTTGAGTTTTCTATACAATTAATATCCAATA
TTGAGATACATTTACCTTCAAAAATAATAGATTTAACAATGCAAAAGATT
AACTACCCACTTCTGTTTGATTTATCAGGATCAGCCAGTTCAGGCTTAGC
ATCATGGGAAATTGCTTTGATCGTGGTCGCCATACTTTTAATCATTGTCA
TCATTCTTGCACTTGTCATCCGAGCTGTTTACAAATCTCGATCTGCCAAG
TCATATGAATCTACCGGTGGAAACGAAAAAGCAAAAATGAATGGAGGATA
TCAAGCTGATGAAAAAGTTTAAAGTGAAACATTCAATACTGCAGTGGACT
TGGAAATAGACTTATGAAAAGAAGAATTCAACTCAAAATAAATTTCAAAG
AACAAAATGACTTGACTTAATAAAATTAAAAACATAATTTAGAGTTCAAA
AGAATTCAGATCTAGATTGGACATTGCCTTTCTTGAAAGAAAATACAAAA
TAACTCAAATTCTTTTCAATCGTATTATCCCTTTTTAGCCCTATTTCATT
CAAAATAATCAATTATTTGAATTTGAATTTTAGGAGTTGCTGGAAATTTA
CTCCGTTTTTTATTATTATTTCATGACATAAACATGACATGAGTTTGCTA
AAAGTAAAACGAAAGAAAACACAAAACATTGTATATATGATAATTCTATT
ATTTTACTATTTTTATTATTTTTATATTGAGTCTAAATACATTTTTGAAG
TTTCTCATTTTTATACTTATTGTTCACCTTTAATTTTTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_011580XLOC_011580Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00020644-exon-sc0000359-1575043694:63239..63364TCONS_00020644-exon-sc0000359-1575043694:63239..63364Clytia hemisphaericaexon
TCONS_00020644-exon-sc0000359-1575043694:62669..62895TCONS_00020644-exon-sc0000359-1575043694:62669..62895Clytia hemisphaericaexon
TCONS_00020644-exon-sc0000359-1575043694:62140..62415TCONS_00020644-exon-sc0000359-1575043694:62140..62415Clytia hemisphaericaexon
TCONS_00020644-exon-sc0000359-1575043694:61387..61686TCONS_00020644-exon-sc0000359-1575043694:61387..61686Clytia hemisphaericaexon
TCONS_00020644-exon-sc0000359-1575043694:60885..61022TCONS_00020644-exon-sc0000359-1575043694:60885..61022Clytia hemisphaericaexon
TCONS_00020644-exon-sc0000359-1575043694:60006..60275TCONS_00020644-exon-sc0000359-1575043694:60006..60275Clytia hemisphaericaexon
TCONS_00020644-exon-sc0000359-1575043694:59317..59751TCONS_00020644-exon-sc0000359-1575043694:59317..59751Clytia hemisphaericaexon
TCONS_00020644-exon-sc0000359-1575043694:58506..58799TCONS_00020644-exon-sc0000359-1575043694:58506..58799Clytia hemisphaericaexon
TCONS_00020644-exon-sc0000359-1575043694:57217..57344TCONS_00020644-exon-sc0000359-1575043694:57217..57344Clytia hemisphaericaexon
TCONS_00020644-exon-sc0000359-1575043694:56871..57051TCONS_00020644-exon-sc0000359-1575043694:56871..57051Clytia hemisphaericaexon
TCONS_00020644-exon-sc0000359-1575043694:56562..56681TCONS_00020644-exon-sc0000359-1575043694:56562..56681Clytia hemisphaericaexon
TCONS_00020644-exon-sc0000359-1575043694:55418..55711TCONS_00020644-exon-sc0000359-1575043694:55418..55711Clytia hemisphaericaexon
TCONS_00020644-exon-sc0000359-1575043694:54497..54799TCONS_00020644-exon-sc0000359-1575043694:54497..54799Clytia hemisphaericaexon
TCONS_00020644-exon-sc0000359-1575043694:54036..54341TCONS_00020644-exon-sc0000359-1575043694:54036..54341Clytia hemisphaericaexon
TCONS_00020644-exon-sc0000359-1575043694:53226..53886TCONS_00020644-exon-sc0000359-1575043694:53226..53886Clytia hemisphaericaexon
TCONS_00020644-exon-sc0000359-1510915933:63239..63364TCONS_00020644-exon-sc0000359-1510915933:63239..63364Clytia hemisphaericaexon
TCONS_00020644-exon-sc0000359-1510915933:62669..62895TCONS_00020644-exon-sc0000359-1510915933:62669..62895Clytia hemisphaericaexon
TCONS_00020644-exon-sc0000359-1510915933:62140..62415TCONS_00020644-exon-sc0000359-1510915933:62140..62415Clytia hemisphaericaexon
TCONS_00020644-exon-sc0000359-1510915933:61387..61686TCONS_00020644-exon-sc0000359-1510915933:61387..61686Clytia hemisphaericaexon
TCONS_00020644-exon-sc0000359-1510915933:60885..61022TCONS_00020644-exon-sc0000359-1510915933:60885..61022Clytia hemisphaericaexon
TCONS_00020644-exon-sc0000359-1510915933:60006..60275TCONS_00020644-exon-sc0000359-1510915933:60006..60275Clytia hemisphaericaexon
TCONS_00020644-exon-sc0000359-1510915933:59317..59751TCONS_00020644-exon-sc0000359-1510915933:59317..59751Clytia hemisphaericaexon
TCONS_00020644-exon-sc0000359-1510915933:58506..58799TCONS_00020644-exon-sc0000359-1510915933:58506..58799Clytia hemisphaericaexon
TCONS_00020644-exon-sc0000359-1510915933:57217..57344TCONS_00020644-exon-sc0000359-1510915933:57217..57344Clytia hemisphaericaexon
TCONS_00020644-exon-sc0000359-1510915933:56871..57051TCONS_00020644-exon-sc0000359-1510915933:56871..57051Clytia hemisphaericaexon
TCONS_00020644-exon-sc0000359-1510915933:56562..56681TCONS_00020644-exon-sc0000359-1510915933:56562..56681Clytia hemisphaericaexon
TCONS_00020644-exon-sc0000359-1510915933:55418..55711TCONS_00020644-exon-sc0000359-1510915933:55418..55711Clytia hemisphaericaexon
TCONS_00020644-exon-sc0000359-1510915933:54497..54799TCONS_00020644-exon-sc0000359-1510915933:54497..54799Clytia hemisphaericaexon
TCONS_00020644-exon-sc0000359-1510915933:54036..54341TCONS_00020644-exon-sc0000359-1510915933:54036..54341Clytia hemisphaericaexon
TCONS_00020644-exon-sc0000359-1510915933:53226..53886TCONS_00020644-exon-sc0000359-1510915933:53226..53886Clytia hemisphaericaexon
TCONS_00020644-exon-sc0000359-1491911889:63239..63364TCONS_00020644-exon-sc0000359-1491911889:63239..63364Clytia hemisphaericaexon
TCONS_00020644-exon-sc0000359-1491911889:62669..62895TCONS_00020644-exon-sc0000359-1491911889:62669..62895Clytia hemisphaericaexon
TCONS_00020644-exon-sc0000359-1491911889:62140..62415TCONS_00020644-exon-sc0000359-1491911889:62140..62415Clytia hemisphaericaexon
TCONS_00020644-exon-sc0000359-1491911889:61387..61686TCONS_00020644-exon-sc0000359-1491911889:61387..61686Clytia hemisphaericaexon
TCONS_00020644-exon-sc0000359-1491911889:60885..61022TCONS_00020644-exon-sc0000359-1491911889:60885..61022Clytia hemisphaericaexon
TCONS_00020644-exon-sc0000359-1491911889:60006..60275TCONS_00020644-exon-sc0000359-1491911889:60006..60275Clytia hemisphaericaexon
TCONS_00020644-exon-sc0000359-1491911889:59317..59751TCONS_00020644-exon-sc0000359-1491911889:59317..59751Clytia hemisphaericaexon
TCONS_00020644-exon-sc0000359-1491911889:58506..58799TCONS_00020644-exon-sc0000359-1491911889:58506..58799Clytia hemisphaericaexon
TCONS_00020644-exon-sc0000359-1491911889:57217..57344TCONS_00020644-exon-sc0000359-1491911889:57217..57344Clytia hemisphaericaexon
TCONS_00020644-exon-sc0000359-1491911889:56871..57051TCONS_00020644-exon-sc0000359-1491911889:56871..57051Clytia hemisphaericaexon
TCONS_00020644-exon-sc0000359-1491911889:56562..56681TCONS_00020644-exon-sc0000359-1491911889:56562..56681Clytia hemisphaericaexon
TCONS_00020644-exon-sc0000359-1491911889:55418..55711TCONS_00020644-exon-sc0000359-1491911889:55418..55711Clytia hemisphaericaexon
TCONS_00020644-exon-sc0000359-1491911889:54497..54799TCONS_00020644-exon-sc0000359-1491911889:54497..54799Clytia hemisphaericaexon
TCONS_00020644-exon-sc0000359-1491911889:54036..54341TCONS_00020644-exon-sc0000359-1491911889:54036..54341Clytia hemisphaericaexon
TCONS_00020644-exon-sc0000359-1491911889:53226..53886TCONS_00020644-exon-sc0000359-1491911889:53226..53886Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000359supercontigsc0000359:53226..63364 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.12473	0.204777	0.124573	0.203549	0	0	0.0965574	0.0228737	0.162631	0.116289	0	0.0561507	14.0155	12.725	0.329243	0.700542	0.274458	0.268956	0	0.299331	0.0674293	0.0389651	0.0721438	0.0175226	0.22112	0	0	0	0.0100187	0.0840827
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00020644 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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