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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00020595 ID=TCONS_00020595|Name=TCONS_00020595|organism=Clytia hemisphaerica|type=transcript|length=1150bp
TTAGAATGTTAGAATGTTACCGTACAACGCCCAAATCGTGAAAAAGTAAA
CAGTAATTCAGAAATCAGAGGGTGTTTTATTAATTATAGCCGTACagttt
tcaaattaattttttacacATCTTAATGTCACCGTAGAGATAGGAACCTT
GAAATGACCTTAAGTATCTCTATTTATAAACAAAgggaaaaattatttat
tgatcCAATTCGTTTTCGTCGTCTTCGAAATCAAATGTTTCTTTTCCTTC
CTCGTAAAAtggttttttctttttgctcgCATCATCCTTTGTATACTCGC
CTCTCACCAATGGTACATCTTTCAATGGCTTTGCCGTCCTCTGGACCATT
TTCACGACCTCGAAAGTCCATGTTATCGGGTCCCCTTTTGCGCTACTGGT
GCTTTCATCTGAAAGACTTCGTTTGACGTAAAGAAGGTAAAACTCATTCA
CGTTACTCACCAGACCCCTCTTTGACTTCATTTTTGTTACCTCCGTCATA
TGGCTTAAAGAAGGTGCCATAGTTCGTTTGAACCAGTAATTTGCACCTGT
CAGCTGCTTCAGTTTTGCTCGTATCCACATGACCAACATATCTCTCTCCG
CCTTTTGTCCACTGAGCCATCAAACAGCCTGAAAAATCAGCACTCATATA
CCAGCCAGGTGGTTGGCCTTGGCGTTCTTTGCAGATAGCGACCACGCTGG
ttgtataatatataaaatgtaTATCCCCTCGTGGCTCAAATCCACCTTTT
CCGTCAACTTGAATTTTCATATCATCTGGACTGCTACATTTTTCCTCATA
Aacacatttgatttttttgagttcttcattacttttgaatttgagttttt
gaggtgcGATTCCTTGACTCGGGTTGTTTGGCTTCATGACCCAAGGGCGT
GGTTGGTCAGCATCGTATGCTTTGGATAATTGAAGCTTTGTACCAACTTT
GAAATCCTCGATAGTGGTTTGAGTTGCAGTTAACTGCAGCAAAACATATA
AACTTACAATGCTTGCCAGAAAGTTCTTCATGATTCAATATGCTTTGTAT
CTACTCCAGATACTCTAATCGATAAAAATCTTGTGTCTGGTTTCATTTGA
ATGGAATgtttcttgaaaaagaaattacttTATTAATTCCATTCATTTTC Run BLAST on NCBI transcript from alignment at sc0000359:100726..101976+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00020595 ID=TCONS_00020595|Name=TCONS_00020595|organism=Clytia hemisphaerica|type=transcript|length=1251bp|location=Sequence derived from alignment at sc0000359:100726..101976+ (Clytia hemisphaerica)
TTAGAATGTTAGAATGTTACCGTACAACGCCCAAATCGTGAAAAAGTAAA
CAGTAATTCAGAAATCAGAGGGTGTTTTATTAATTATAGCCGTACagttt
tcaaattaattttttacacATCTTAATGTCACCGTAGAGATAGGAACCTT
GAAATGACCTTAAGTATCTCTATTTATAAACAAAgggaaaaattatttat
tgatcCAATTCGTTTTCGTCGTCTTCGAAATCAAATGTTTCTTTTCCTTC
CTCGTAAAAtggttttttctttttgctcgCATCATCCTTTGTATACTCGC
CTCTCACCAATGGTACATCTTTCAATGGCTTTGCCGTCCTCTGGACCATT
TTCACGACCTCGAAAGTCCATGTTATCGGGTCCCCTTTTGCGCTACTGGT
GCTTTCATCTGAAAGACTTCGTTTGACGTAAAGAAGGTAAAACTCATTCA
CGTTACTCACCAGACCCCATTTATACAACACTTTGTAAGCTAAAGGTAGA
TTCTTATATTTCTCCTCCCCGACCTCCTTCATCGTCGCTTTTTCGTGCTT
TTTGTTCAAAGACTCGTACTCTTTGACTTCATTTTTGTTACCTCCGTCAT
ATGGCTTAAAGAAGGTGCCATAGTTCGTTTGAACCAGTAATTTGCACCTG
TCAGCTGCTTCAGTTTTGCTCGTATCCACATGACCAACATATCTCTCTCC
GCCTTTTGTCCACTGAGCCATCAAACAGCCTGAAAAATCAGCACTCATAT
ACCAGCCAGGTGGTTGGCCTTGGCGTTCTTTGCAGATAGCGACCACGCTG
GttgtataatatataaaatgtaTATCCCCTCGTGGCTCAAATCCACCTTT
TCCGTCAACTTGAATTTTCATATCATCTGGACTGCTACATTTTTCCTCAT
AAacacatttgatttttttgagttcttcattacttttgaatttgagtttt
tgaggtgcGATTCCTTGACTCGGGTTGTTTGGCTTCATGACCCAAGGGCG
TGGTTGGTCAGCATCGTATGCTTTGGATAATTGAAGCTTTGTACCAACTT
TGAAATCCTCGATAGTGGTTTGAGTTGCAGTTAACTGCAGCAAAACATAT
AAACTTACAATGCTTGCCAGAAAGTTCTTCATGATTCAATATGCTTTGTA
TCTACTCCAGATACTCTAATCGATAAAAATCTTGTGTCTGGTTTCATTTG
AATGGAATgtttcttgaaaaagaaattacttTATTAATTCCATTCATTTT
C
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00020595-exon-sc0000359-1491911889:100726..101193 | TCONS_00020595-exon-sc0000359-1491911889:100726..101193 | Clytia hemisphaerica | exon |
| TCONS_00020595-exon-sc0000359-1510915933:100726..101193 | TCONS_00020595-exon-sc0000359-1510915933:100726..101193 | Clytia hemisphaerica | exon |
| TCONS_00020595-exon-sc0000359-1575043694:100726..101193 | TCONS_00020595-exon-sc0000359-1575043694:100726..101193 | Clytia hemisphaerica | exon |
| TCONS_00020595-exon-sc0000359-1491911889:101295..101976 | TCONS_00020595-exon-sc0000359-1491911889:101295..101976 | Clytia hemisphaerica | exon |
| TCONS_00020595-exon-sc0000359-1510915933:101295..101976 | TCONS_00020595-exon-sc0000359-1510915933:101295..101976 | Clytia hemisphaerica | exon |
| TCONS_00020595-exon-sc0000359-1575043694:101295..101976 | TCONS_00020595-exon-sc0000359-1575043694:101295..101976 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000359 | supercontig | sc0000359:100726..101976 + |
Blast
The following BLAST results are available for this feature:
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