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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00020587 ID=TCONS_00020587|Name=TCONS_00020587|organism=Clytia hemisphaerica|type=transcript|length=1177bp
ACTGAATCAACTGGGACAGAAATCAACTATCGATGTGTAATGTGCAGAAA
CTGCAAAGATTGCAAAAACTCCATTCATCAAAGGGAAGTTAGCATCAAAG
AGGAGGTTGAGCAAGACGTCATAAACTCATCCATTGACATTGACACCAAC
CAAAACATCATCACAGCTCGTCTTCCATTCGTCGACAAAGTATCAAAACT
AGCACCAAACAAGAATATTGCTCTCAAAATTTACTACCAACAGCTCAAGA
AGTTGGGAGCTAATCCAAAAGACAAAGACGACATCATCAAATCAGAAGCC
AAATTGCAAGAGATGGGTTACGTCGACTTCGTTGAAAATCTCACTGCTGA
CCAACAAATCATGTTAGCTGACTCACCAACGCACAACTTCATCCCATGGC
GTGCTGTATGGAAAACCACATCACTAAGTACACCATGTCGAGTCGTATAT
GACGCATCACACCCAACCAGCTCAGGTTATAGTCTGAATGATTTGTTGGC
AAAAGGACAGAACAACCTCAACAAACTCCAAGAAGTTCTTATCAGATGGT
CATACATCAAGTTGGCATACACACAGATATACGAAAAATGTATAACACGA
TCAGACTCAACTGCAAAGATTGGCGTTACCAGCGTTACATCTGGCAGAAT
AACCTCGACCCATCAAAGATTCCAAAGGAAAAGGTAATCAAGACACTCAC
TTATGGGATACGATCAAGTGGAAACCAAGCAGAATGTGGTCTCCGTGCAA
TCGCAAACCTATTTGAAGATGAATATCCAGAAGTGAAGCAAATCATCAAT
GAAAATGTATACGTTGACGATTGCATCACAGGCGAGAAAGACATCGACGC
AGCTTTCAACAGAGCTGATCAGTTAGAAGTTGTCATCAATCGTGGAGGAT
TCAACCTCAAAGGTGTGACATTCTCTGGCATTGATCCATCACCAGACCTC
ACAGACGATGGTGTTAGCATTTCAGTTGGTGGTATGAAGTGGTATCCCAA
AGCCGATCGACTCTCACTCTGCATCTCCGATTTGAATTTCGCAAAGAAGC
AAAGAGGCAAGAAACCAACCAATGCATCAAACATCATTCCTACCAATCTC
ACTCGAAGGCACTGCGCTTCCAAAGTTGCAGAAGTTTTTGACATTACAGG
GATGATGACACCAATAGTTGCTGCTAT Run BLAST on NCBI protein sequence of TCONS_00020587-protein >TCONS_00020587-protein ID=TCONS_00020587-protein|Name=TCONS_00020587-protein|organism=Clytia hemisphaerica|type=polypeptide|length=228bp
TESTGTEINYRCVMCRNCKDCKNSIHQREVSIKEEVEQDVINSSIDIDTN
QNIITARLPFVDKVSKLAPNKNIALKIYYQQLKKLGANPKDKDDIIKSEA
KLQEMGYVDFVENLTADQQIMLADSPTHNFIPWRAVWKTTSLSTPCRVVY
DASHPTSSGYSLNDLLAKGQNNLNKLQEVLIRWSYIKLAYTQIYEKCITR
SDSTAKIGVTSVTSGRITSTHQRFQRKR Run BLAST on NCBI transcript from alignment at sc0000358:288681..289857 Legend: exonthree_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00020587 ID=TCONS_00020587|Name=TCONS_00020587|organism=Clytia hemisphaerica|type=transcript|length=1177bp|location=Sequence derived from alignment at sc0000358:288681..289857 (Clytia hemisphaerica)
ATAGCAGCAACTATTGGTGTCATCATCCCTGTAATGTCAAAAACTTCTGC
AACTTTGGAAGCGCAGTGCCTTCGAGTGAGATTGGTAGGAATGATGTTTG
ATGCATTGGTTGGTTTCTTGCCTCTTTGCTTCTTTGCGAAATTCAAATCG
GAGATGCAGAGTGAGAGTCGATCGGCTTTGGGATACCACTTCATACCACC
AACTGAAATGCTAACACCATCGTCTGTGAGGTCTGGTGATGGATCAATGC
CAGAGAATGTCACACCTTTGAGGTTGAATCCTCCACGATTGATGACAACT
TCTAACTGATCAGCTCTGTTGAAAGCTGCGTCGATGTCTTTCTCGCCTGT
GATGCAATCGTCAACGTATACATTTTCATTGATGATTTGCTTCACTTCTG
GATATTCATCTTCAAATAGGTTTGCGATTGCACGGAGACCACATTCTGCT
TGGTTTCCACTTGATCGTATCCCATAAGTGAGTGTCTTGATTACCTTTTC
CTTTGGAATCTTTGATGGGTCGAGGTTATTCTGCCAGATGTAACGCTGGT
AACGCCAATCTTTGCAGTTGAGTCTGATCGTGTTATACATTTTTCGTATA
TCTGTGTGTATGCCAACTTGATGTATGACCATCTGATAAGAACTTCTTGG
AGTTTGTTGAGGTTGTTCTGTCCTTTTGCCAACAAATCATTCAGACTATA
ACCTGAGCTGGTTGGGTGTGATGCGTCATATACGACTCGACATGGTGTAC
TTAGTGATGTGGTTTTCCATACAGCACGCCATGGGATGAAGTTGTGCGTT
GGTGAGTCAGCTAACATGATTTGTTGGTCAGCAGTGAGATTTTCAACGAA
GTCGACGTAACCCATCTCTTGCAATTTGGCTTCTGATTTGATGATGTCGT
CTTTGTCTTTTGGATTAGCTCCCAACTTCTTGAGCTGTTGGTAGTAAATT
TTGAGAGCAATATTCTTGTTTGGTGCTAGTTTTGATACTTTGTCGACGAA
TGGAAGACGAGCTGTGATGATGTTTTGGTTGGTGTCAATGTCAATGGATG
AGTTTATGACGTCTTGCTCAACCTCCTCTTTGATGCTAACTTCCCTTTGA
TGAATGGAGTTTTTGCAATCTTTGCAGTTTCTGCACATTACACATCGATA
GTTGATTTCTGTCCCAGTTGATTCAGT Coding sequence (CDS) from alignment at sc0000358:288681..289857 >TCONS_00020587 ID=TCONS_00020587|Name=TCONS_00020587|organism=Clytia hemisphaerica|type=CDS|length=687bp|location=Sequence derived from alignment at sc0000358:288681..289857 (Clytia hemisphaerica)
TTACCTTTTCCTTTGGAATCTTTGATGGGTCGAGGTTATTCTGCCAGATG
TAACGCTGGTAACGCCAATCTTTGCAGTTGAGTCTGATCGTGTTATACAT
TTTTCGTATATCTGTGTGTATGCCAACTTGATGTATGACCATCTGATAAG
AACTTCTTGGAGTTTGTTGAGGTTGTTCTGTCCTTTTGCCAACAAATCAT
TCAGACTATAACCTGAGCTGGTTGGGTGTGATGCGTCATATACGACTCGA
CATGGTGTACTTAGTGATGTGGTTTTCCATACAGCACGCCATGGGATGAA
GTTGTGCGTTGGTGAGTCAGCTAACATGATTTGTTGGTCAGCAGTGAGAT
TTTCAACGAAGTCGACGTAACCCATCTCTTGCAATTTGGCTTCTGATTTG
ATGATGTCGTCTTTGTCTTTTGGATTAGCTCCCAACTTCTTGAGCTGTTG
GTAGTAAATTTTGAGAGCAATATTCTTGTTTGGTGCTAGTTTTGATACTT
TGTCGACGAATGGAAGACGAGCTGTGATGATGTTTTGGTTGGTGTCAATG
TCAATGGATGAGTTTATGACGTCTTGCTCAACCTCCTCTTTGATGCTAAC
TTCCCTTTGATGAATGGAGTTTTTGCAATCTTTGCAGTTTCTGCACATTA
CACATCGATAGTTGATTTCTGTCCCAGTTGATTCAGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00020587-exon-sc0000358-1491911889:288681..289857 | TCONS_00020587-exon-sc0000358-1491911889:288681..289857 | Clytia hemisphaerica | exon |
| TCONS_00020587-exon-sc0000358-1510915933:288681..289857 | TCONS_00020587-exon-sc0000358-1510915933:288681..289857 | Clytia hemisphaerica | exon |
| TCONS_00020587-exon-sc0000358-1575043694:288681..289857 | TCONS_00020587-exon-sc0000358-1575043694:288681..289857 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000358 | supercontig | sc0000358:288681..289857 . |
Blast
The following BLAST results are available for this feature:
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