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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00020576 ID=TCONS_00020576|Name=TCONS_00020576|organism=Clytia hemisphaerica|type=transcript|length=976bp
AAGAGCGTGGGAAATTTATATCACGTAATAAACAttggaatgtcttcttt
ttcttttgaatgttgcaaaaaaggagaaaaaagtgtTGCTCAGTGGCGGC
TTATTTGATCTTCATAAATGACACTGCattatcttctttttctttgcaaa
GAGCAGAATTGGGGGTGAGCGCAGTGAAATACGCTAGAAAGTGAATTTCG
ATAAATGATGAGCTTGACATGGGCAAATGtatcaaattcaaataaaaaat
gataatcaaGCATCATCTGATTATGATCATTTCTCCCCAACATGTTGCTA
GAAACCTTCGATTTGTAACATTTCAATCTCCAAGagaaaaggagtgagcc
tatAAAAGtcattttccactaaataaagGCAGAGTACTGAGACATATAAA
AAAGGGAAgcatttctttctttaaaactttatttataAGTAGATACCAGT
ATTGGACTCGCCCGTGGTGATGACGATCTTTAATATGTTCGAGACGGGAG
TTATTAAAGTCAGCGCTTatttatgaaaatcaaatttaagaaaTCTTTGG
GCCTTTTTATCGATTATCTTTCCAAGATTCGAACTCGTATGTCGTATACT
CCATTTTGTTTCTGAGATACTGCCCATAATGGTTAAGCTTAAATACTGCT
GTGGTGAAGTGTCTATCTTGATTTGAAAATTGTCACTCGATTTGTCTTTT
GAAATTCACTAACCATGTCAAACGAAAACGGCGTAAATTAATCCACATTT
AAGGTAATTTTGAACAATATCTTTGAGCTGCCGTAACTAATTAACGATTT
AGACCTTtacaaatgtaaaaaaaaaattcaattgcCTATTctatagtata
gtatagtaaGTATAGATTACgaataaaatatcgaaatatgcGTAGTGGGA
ACTGATAATTTATACAATCTTTCAGTACTCACTTTAAAATCTATACTTTC
GATAGACCTAACAAGTTCTTTTTGAT Run BLAST on NCBI transcript from alignment at sc0000358:45563..46538 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00020576 ID=TCONS_00020576|Name=TCONS_00020576|organism=Clytia hemisphaerica|type=transcript|length=976bp|location=Sequence derived from alignment at sc0000358:45563..46538 (Clytia hemisphaerica)
ATCAAAAAGAACTTGTTAGGTCTATCGAAAGTATAGATTTTAAAGTGAGT
ACTGAAAGATTGTATAAATTATCAGTTCCCACTACgcatatttcgatatt
ttattcGTAATCTATACttactatactatactatagAATAGgcaattgaa
ttttttttttacatttgtaAAGGTCTAAATCGTTAATTAGTTACGGCAGC
TCAAAGATATTGTTCAAAATTACCTTAAATGTGGATTAATTTACGCCGTT
TTCGTTTGACATGGTTAGTGAATTTCAAAAGACAAATCGAGTGACAATTT
TCAAATCAAGATAGACACTTCACCACAGCAGTATTTAAGCTTAACCATTA
TGGGCAGTATCTCAGAAACAAAATGGAGTATACGACATACGAGTTCGAAT
CTTGGAAAGATAATCGATAAAAAGGCCCAAAGAtttcttaaatttgattt
tcataaatAAGCGCTGACTTTAATAACTCCCGTCTCGAACATATTAAAGA
TCGTCATCACCACGGGCGAGTCCAATACTGGTATCTACTtataaataaag
ttttaaagaaagaaatgcTTCCCTTTTTTATATGTCTCAGTACTCTGCct
ttatttagtggaaaatgaCTTTTataggctcactccttttctCTTGGAGA
TTGAAATGTTACAAATCGAAGGTTTCTAGCAACATGTTGGGGAGAAATGA
TCATAATCAGATGATGCttgattatcattttttatttgaatttgataCAT
TTGCCCATGTCAAGCTCATCATTTATCGAAATTCACTTTCTAGCGTATTT
CACTGCGCTCACCCCCAATTCTGCTCtttgcaaagaaaaagaagataatG
CAGTGTCATTTATGAAGATCAAATAAGCCGCCACTGAGCAacactttttt
ctccttttttgcaacattcaaaagaaaaagaagacattccaaTGTTTATT
ACGTGATATAAATTTCCCACGCTCTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00020576-exon-sc0000358-1491911889:45563..46538 | TCONS_00020576-exon-sc0000358-1491911889:45563..46538 | Clytia hemisphaerica | exon |
| TCONS_00020576-exon-sc0000358-1510915933:45563..46538 | TCONS_00020576-exon-sc0000358-1510915933:45563..46538 | Clytia hemisphaerica | exon |
| TCONS_00020576-exon-sc0000358-1575043694:45563..46538 | TCONS_00020576-exon-sc0000358-1575043694:45563..46538 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000358 | supercontig | sc0000358:45563..46538 . |
Blast
The following BLAST results are available for this feature:
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