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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00020564 ID=TCONS_00020564|Name=TCONS_00020564|organism=Clytia hemisphaerica|type=transcript|length=477bp
Acaatatataaataaatttaattcataattttgaatgtttctttaaattt
tgtgaaactTTTAAGCCATACAAATAAGGAATCTTCGCACCTATCCAact
ctttttttaaagtttaagaGAATCTGAAATGGCAGCTTGCAACCCTAACG
AGCTTGGATTCGACGTTATATTTGCATGGGAAGATGGGAAAGATGACCAG
AATCAAAATGCTCAGATTGATGGAGCTATAAACCGCGATGACATCACATG
TGCAATATGTCTTTTGGTTTTGAGAGAGCCTGTACAAGCAGTGGATTGCG
GACATCGTTTTTGTACAAAATGTATTGGAGAATTTCATCTGATTAACCCA
GGAAAATGTCCGAAAGATTGGCAAGATATCCAGGTTTTCCCAGACGTTGG
AAAAAAGAGAGAAATTTTGAGTCTGAAAATCCGATGTAAAAATTTTACCG
TTGGTTGCACGTGGCAAAACGAACTCC Run BLAST on NCBI transcript from alignment at sc0000358:87099..87892- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00020564 ID=TCONS_00020564|Name=TCONS_00020564|organism=Clytia hemisphaerica|type=transcript|length=794bp|location=Sequence derived from alignment at sc0000358:87099..87892- (Clytia hemisphaerica)
ACAATATATAAATAAATTTAATTCATAATTTTGAATGTTTCTTTAAATTT
TGTGAAACTTTTAAGCCATACAAATAAGGAATCTTCGCACCTATCCAACT
CTTTTTTTAAAGTTTAAGAGAATCTGAAATGGCAGCTTGCAACCCTAACG
AGCTTGGATTCGACGTTATATTTGCATGGGAAGATGGGAAAGATGACCAG
AATCAAAATGCTCAGATTGATGGAGCTATAAACCGCGATGACATCACATG
TGCAATATGTCTTTTGGTTTTGAGAGAGCCTGTACAAGCAGTGGATTGCG
GACATCGTTTTTGTACAAAATGTATTGGAGAATTTCATCTGATTAAGTAA
GAAACTTTTTAATTTTAGGAACAAAATCTGTAAATCGAACTGATTGTTGA
TGTTCACAGTCTTTAAATCTCAAAACATTTTTGTGCTTTCTATTTTAGCC
CAGGAAAATGTCCGAAAGATTGGCAAGATATCCAGGTTAGTTGTACTTTC
ACTCTACAGTTATATGGGGGGCCCCTTATATTGAAATGAAAGAAATATTA
AAGGGGATTATCAACGAAAAGAAGCGACAAAAACAATTAAGAAATCCCAT
TACTCTCAGGTACCTAATAGAGGTTGGAATAAGTGGGGGGGTTGGACGGC
TATTAGGTACCCGAGAGTAAGAACGCATACCGTACCTTTAAAATTTTCAG
GTTTTCCCAGACGTTGGAAAAAAGAGAGAAATTTTGAGTCTGAAAATCCG
ATGTAAAAATTTTACCGTTGGTTGCACGTGGCAAAACGAACTCC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00020564-exon-sc0000358-1575043694:87547..87892 | TCONS_00020564-exon-sc0000358-1575043694:87547..87892 | Clytia hemisphaerica | exon |
| TCONS_00020564-exon-sc0000358-1575043694:87408..87444 | TCONS_00020564-exon-sc0000358-1575043694:87408..87444 | Clytia hemisphaerica | exon |
| TCONS_00020564-exon-sc0000358-1575043694:87099..87192 | TCONS_00020564-exon-sc0000358-1575043694:87099..87192 | Clytia hemisphaerica | exon |
| TCONS_00020564-exon-sc0000358-1510915933:87547..87892 | TCONS_00020564-exon-sc0000358-1510915933:87547..87892 | Clytia hemisphaerica | exon |
| TCONS_00020564-exon-sc0000358-1510915933:87408..87444 | TCONS_00020564-exon-sc0000358-1510915933:87408..87444 | Clytia hemisphaerica | exon |
| TCONS_00020564-exon-sc0000358-1510915933:87099..87192 | TCONS_00020564-exon-sc0000358-1510915933:87099..87192 | Clytia hemisphaerica | exon |
| TCONS_00020564-exon-sc0000358-1491911889:87547..87892 | TCONS_00020564-exon-sc0000358-1491911889:87547..87892 | Clytia hemisphaerica | exon |
| TCONS_00020564-exon-sc0000358-1491911889:87408..87444 | TCONS_00020564-exon-sc0000358-1491911889:87408..87444 | Clytia hemisphaerica | exon |
| TCONS_00020564-exon-sc0000358-1491911889:87099..87192 | TCONS_00020564-exon-sc0000358-1491911889:87099..87192 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000358 | supercontig | sc0000358:87099..87892 - |
Blast
The following BLAST results are available for this feature:
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