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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00020539 ID=TCONS_00020539|Name=TCONS_00020539|organism=Clytia hemisphaerica|type=transcript|length=889bp
tcttgtatTGTATTGTCTGAGTAGCGGATGTAGgataatataaacaaaaa
catcataatTGCAGTGAATAACTCCATGTGCGGCATCAGAATTCTAGTAC
AATTTTTTCCTTGTTATGAGATCACAATTAATAATGTGTAATCTTTTTGT
GTATCACGATTTAATTTCGTGATGGTACGACATCTAGTTTCATTTCTCAC
GCgacaaaaatatacaaaatttcCTTTAGCAATCTCGTTTGGTGTTCAAG
TAGTACAATGAACGTTGAGTGGATAGTGATACGAATTACATATCAATGCC
ATTTGGTATTTGATGAGTTCAGGTTAGACCAAATACGATAACCAaggttc
attttcaaattttacagaaAGAAATCTGACAGCAAAGACGTAATTTGCAG
CGGGTACACCACGTAGTGATACACTTTTTAAATGCACTGCTATAAATTCT
GGTATCTACAGTTTGCCTTGGATACTGCACAATCGATCACATGAGCCAGG
GCACGTAGCATTTCTacacatcatattttcaagggAATCTACCAAATCTG
CTCCAACAGTATCTCATCCAACTGCCTCTAAATTGATCCCATGATACCAA
AATTGAATCTGTTGAcaaacaaatttgatttttcctcAAAACAAAGCTCT
TCTCCGTTGGTAAGGGCATCTTTACCGCAATCTCTGGTCAGAAATGGGAT
AGCCAGGGCTGCAATAGCCAGAATAAGTGGAAGCCAGCTCCAAGCCATCA
TTAAACAGAAAACAAACAGGGCAACTGTTGTAGTTGAATCTTGTTTATGT
TCATTTTCAAATACTTTGTAGTTCTCCATGTTACGTaaattgttaaattt
ttttttctagtttAAATCTGTCGTCTGACTGTAACTAAG Run BLAST on NCBI transcript from alignment at sc0000357:264183..265071 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00020539 ID=TCONS_00020539|Name=TCONS_00020539|organism=Clytia hemisphaerica|type=transcript|length=889bp|location=Sequence derived from alignment at sc0000357:264183..265071 (Clytia hemisphaerica)
CTTAGTTACAGTCAGACGACAGATTTaaactagaaaaaaaaatttaacaa
tttACGTAACATGGAGAACTACAAAGTATTTGAAAATGAACATAAACAAG
ATTCAACTACAACAGTTGCCCTGTTTGTTTTCTGTTTAATGATGGCTTGG
AGCTGGCTTCCACTTATTCTGGCTATTGCAGCCCTGGCTATCCCATTTCT
GACCAGAGATTGCGGTAAAGATGCCCTTACCAACGGAGAAGAGCTTTGTT
TTgaggaaaaatcaaatttgtttgTCAACAGATTCAATTTTGGTATCATG
GGATCAATTTAGAGGCAGTTGGATGAGATACTGTTGGAGCAGATTTGGTA
GATTcccttgaaaatatgatgtgtAGAAATGCTACGTGCCCTGGCTCATG
TGATCGATTGTGCAGTATCCAAGGCAAACTGTAGATACCAGAATTTATAG
CAGTGCATTTAAAAAGTGTATCACTACGTGGTGTACCCGCTGCAAATTAC
GTCTTTGCTGTCAGATTTCTttctgtaaaatttgaaaatgaacctTGGTT
ATCGTATTTGGTCTAACCTGAACTCATCAAATACCAAATGGCATTGATAT
GTAATTCGTATCACTATCCACTCAACGTTCATTGTACTACTTGAACACCA
AACGAGATTGCTAAAGgaaattttgtatatttttgtcGCGTGAGAAATGA
AACTAGATGTCGTACCATCACGAAATTAAATCGTGATACACAAAAAGATT
ACACATTATTAATTGTGATCTCATAACAAGGAAAAAATTGTACTAGAATT
CTGATGCCGCACATGGAGTTATTCACTGCAattatgatgtttttgtttat
attatcCTACATCCGCTACTCAGACAATACAatacaaga
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00020539-exon-sc0000357-1491911889:264183..265071 | TCONS_00020539-exon-sc0000357-1491911889:264183..265071 | Clytia hemisphaerica | exon |
| TCONS_00020539-exon-sc0000357-1510915933:264183..265071 | TCONS_00020539-exon-sc0000357-1510915933:264183..265071 | Clytia hemisphaerica | exon |
| TCONS_00020539-exon-sc0000357-1575043694:264183..265071 | TCONS_00020539-exon-sc0000357-1575043694:264183..265071 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000357 | supercontig | sc0000357:264183..265071 . |
Blast
The following BLAST results are available for this feature:
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