TCONS_00020511 (transcript) - C. hemisphaerica

Overview
NameTCONS_00020511
Unique NameTCONS_00020511
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1651

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00020511 ID=TCONS_00020511|Name=TCONS_00020511|organism=Clytia hemisphaerica|type=transcript|length=1651bp
TTTAGGTTACTAAATAAAAATGGCTAAGCAAGGCTGTGTGACGGTCAGTT
GTGTCAAAACATGGTTCCTTGTATTTACAGCTGTTTTGCTGTTATTTGCC
ATTGGAATCTTTGGCTTTGGTGTTTGGTTTTTGGTGACGCAGAACCACTA
TGAGCCCATTCTTGGTAGTATGACTTACATTACAACTCTGGGTTTGATGT
TGGCTGCAGGTCTCTTTTCAATGTTTGTCTGTATCTTTGGTATCATTGGT
GCAGTACGTGAAAGCAGGTTCATGGTTCTCGGATTCTTTCTGATGATtat
cattgtttgtttgttggAGATTGTTGGTGGAATCCTTGCTTATGTTTACC
GGAAAGATGTCCAGGAAGAGATCACACGTAATCTGAACATTGAAATGGTT
TCAAATTACGGAAAACCAGGGAATGAGAAGAAGACAGATGCCATCGACAT
GCtacaaaaatcaTATCAATGCTGTGGGGACGCCGACTACCAAGTATGGA
AACGAACTGAATGGCACAAACAGGATCCTCCCAAAACCAAACCCAATGTA
CCGGATGACCAACAAATGAAAGTTCCGGATTCTTGTTGTATTACAGCGGA
TCAGAAGGATTGCGGACATCGCATACATCCGTCGAATATTTGGAGGAATG
ATCTTAAGCCCATTGGTTGTATTCCGCAGTTGATTGGATTCTTGGAGAAC
CATCTCATTAAAATTGGAATCGCTTGTCTTGTCTCTGGTCTGGCTCAGat
tatCTGTATCGTTCTTTCCATGTGGCTGTACCGTTTGATCGTCGAGTTCC
GTTAAACGGAAATACCAAAAACCTGGAAAAGATCACGAGTCCACGACATC
ATGCACGATTGTAAAACACAAACAAGAGAAAGTTGTTTTTCGTAACATCC
TCTATTCGTCTGAAACTCCTATCCAAAATGCCGGACACCGAACAAGATGT
AACCACTGACAACAATAATAACAAAGAACAGTGTGGAAAAGTAGATTCTC
CTCCACCCCCGCCCGTCATCGCTCCACGGAAAGATGACATGAAATCAACT
TCAATGGCGAACTACCGGCAAGTCAAACGCATGAATAAGAAGAAATCCTC
ATCAAGATTAAACAGTCGATCTTCGAATGGTTCGATCAATATCGAAAACG
CAAATTCATCGACCCAAGCATGAAGCATCTTActatattttgaaagtttt
atcaGATGATGGTGTATTGTGTATTGTGTTTAATACATACAACGACATAC
AAATGCTGCATAAAAAGATTGGATTCGAGTTTGCTAAGGTTGAGTGACTT
attgacaaaatttattgattctCCTTTAGTAAACTAGAACCCAATCTCCT
GTCTCTAGTGTTAAGATATTTGAACCCCTAGATTTCCCATTAGGGATTCG
ATTCATCACAGTGGAAATTGATaatatttaaaacttttgttgtgCTTTTG
TATATGAACCATGACGAATTAAGTTGTCACTTGTCTTCGATTCTCTCTAC
ATATTTGTAAAAACGAAAAATTGTATATATTGATATGAAAGTAGAATAGT
TTTTCTCAataattttttgtccaaaagACATGCATTACAAAAACCAAATT
CTAGTTATgtattacacccccttctcacagaaccgATAGGATTTCTTCAG
C
Run BLAST on NCBI

protein sequence of TCONS_00020511-protein

>TCONS_00020511-protein ID=TCONS_00020511-protein|Name=TCONS_00020511-protein|organism=Clytia hemisphaerica|type=polypeptide|length=261bp
MAKQGCVTVSCVKTWFLVFTAVLLLFAIGIFGFGVWFLVTQNHYEPILGS
MTYITTLGLMLAAGLFSMFVCIFGIIGAVRESRFMVLGFFLMIIIVCLLE
IVGGILAYVYRKDVQEEITRNLNIEMVSNYGKPGNEKKTDAIDMLQKSYQ
CCGDADYQVWKRTEWHKQDPPKTKPNVPDDQQMKVPDSCCITADQKDCGH
RIHPSNIWRNDLKPIGCIPQLIGFLENHLIKIGIACLVSGLAQIICIVLS
MWLYRLIVEFR
Run BLAST on NCBI

transcript from alignment at sc0000357:35789..47824-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00020511 ID=TCONS_00020511|Name=TCONS_00020511|organism=Clytia hemisphaerica|type=transcript|length=12036bp|location=Sequence derived from alignment at sc0000357:35789..47824- (Clytia hemisphaerica)
TTTAGGTTACTAAATAAAAATGGCTAAGCAAGGCTGTGTGACGGTCAGTT
GTGTCAAAACATGGTTCCTTGTATTTACAGCTGTTTTGCTGGTAAGAAAA
TAAGACTTGGCTATATAATTCAACTCTTCTCAAACAATTTCAGTTTGTAT
ATAAGGCAGAAAGGGGAGCTTGCATCAGCCTACACAGGATATTTCCTGGT
GTCTATCATAATGTAAATAAAGTCTGGTATACACAGGGACTAGGTTGTTG
TCGGTTATTGCCGTACTAGAAATTGTCAGACTTCTGTCGCCATTGAGTAA
AGGGCTACTTATAGCAATATACTGACGGACAATTTTCTTTCTGTTAACAA
TCTCGCTATATTGTTGGAATATTGCAAATGGAGCTGATAATATATAGTGA
ACATCTTTTTAATGTATTGCCGGCAATCAGCAATATATTGTCAATATATT
GCGTGACAATGTATTGTGTAGTGTATGTAGCCCTTAACGTTTTATGTATT
TTATCATAGTTATTTGCCATTGGAATCTTTGGCTTTGGTGTTTGGTTTTT
GGTGACGCAGAACCACTATGAGCCCATTCTTGGTAGTATGACTTACATTA
CAACTCTGGGTTTGATGTTGGCTGCAGGTCTCTTTTCAATGTTTGTCTGT
ATCTTTGGTATCATTGGTGCAGTACGTGAAAGCAGGTTCATGGTTCTCGG
AGTAAGTGTCATCAAAATATTATTTTTTGAAAACTTCCTTTGGAAATGAA
AACTCTTATTTCTGGGTTTAAAATTACTTTTGAAATCACACACTACTTTA
ATGGAGAGCCATTTGCTTAAGGCTGGTCTCCACTTGCGCACGCTTCGATC
GCACTTTTTCTAGCAAAGCTTCCACACTATTGGTCAAAAGAAAAATGAAG
CAACTCCATTGGCGCGATCTGACGTAACGGTTGAAAAAAGTTGAAATGTT
CAACTTTTTTTTCAAGCGCGGGTGCTACATTTTTATGACGTAATCTTTTT
TCCAAACAAAAAGGATTGAAGCCAAAAAGTGCGATTGCAGCGCGCGCAAG
TGGAGACCGGCCTTTAGGCTTTTCGAATGAAATTTTCAATAAAATGAATC
ATAATATTGATTGATGACATAATCTCTTTCTTCAGTTCTTTCTGATGATT
ATCATTGTTTGTTTGTTGGAGATTGTTGGTGGAATCCTTGCTTATGTTTA
CCGGAAAGATGTAAGTTTCGGCTCCCCAACATGTTAAAAACTCTGTACAT
TTGAAATTCATCAATTCAACTTTTGCTAAATAATTACTGTTAATTGCTTA
TTCGTTATTAAAAAGAGCACTGCATTATGATAAATCTTTATTTTGAAAAT
AGCTAGCCATCACTATGGCTTTTCACTTTTCGACTTTTTTTGTATATCAT
TTTTAACTTTTGCAAATATTCTAACAAAAATTACACTTTTCTCGTACTTT
TGTTCTTCAGGTCCAGGAAGAGATCACACGTAATCTGAACATTGAAATGG
TTTCAAATTACGGAAAACCAGGGAATGAGAAGAAGACAGATGCCATCGAC
ATGCTACAAAAATCAGTTAGTAAATATATTTTGATCATAAGAGCTACTTA
GACTACACAATATATTGACAAACAATATTCAACAATATGGTTTGCGGTAC
TCGATTATAAAAGGGAATTTTCTTTCTGTAAACAATATATATTGCAAATG
GAGCTGACAATATATTGCGAACATCTTTTCAATGTATTGCCGAAATTCAG
CAATATATTAAGATACTAAGTTTTCTAAAAGCTTTTATCTAAGATTGATT
GTTTAAGCTTTTTAATATTAAAGGGCTTTTACAATAACCTGGCTAATATA
ATAATATCTGGCTGTTTTTGTAAGGTTCTAAACCAAAGATTTCTCCCTAA
AAACTTACATGGAACTTTACTTTGCGACCTAAAGGCTGAAGGTGCCTGTC
AAACTACAACTGTTTTCAAATTGATTTTGATGTGCACACTGATTTTAGAC
TGCAGGTAAAAAAAGGAAATGTTAGTGGGATGGAGCCAATCATTGAAATT
AAAGCCCTGAAGATGTAAAAAAGATATTTCAAAAAAATACTTGACCACAC
CCAAACCACTAGATTCAATCCATCATCATAGTTGTATGTGGCGAAGGTTT
CACATACTTTTGCCTGTGAAACTGAGCTCTTTGGAATACTGCCCTATCAA
TGGATATTGTTTTTAGTAACAAGCTGACATTGGATAGATCCTTTAGTTGT
GCTAAGTATCATGCGTGAGTGTTGAACTAATAAAATAACAATTTGTATTG
TTTATCTCCATAGTATCAATGCTGTGGGGACGCCGACTACCAAGTATGGA
AACGAACTGAATGGCACAAACAGGATCCTCCCAAAACCAAACCCAATGTA
CCGGATGACCAACAAATGAAAGTTCCGGATTCTTGTTGTATTACAGCGGA
TCAGAAGGATTGCGGACATCGCATACATCCGTCGAATATTTGGAGGAATG
ATCTTAAGGTATCATCAAGGTCTTCTATATATTAATAGTGGTAGTCTGTA
TGTCGTTTTGTCTTTCTTTCTGTCTGTGCTACTTTCGTTTTCGTACGCAA
TGTTTTTGTTCTTTTAAAAGATNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNGGGCTGCCTGTTTTCGACGAATCTCGCG
TGGCATGTCTATTATTTCAGTCCGCGTATCTTGACATCAAAGTTTTCCTA
AACATCAAGAACTACGGCAAATATATCACGAGCGAAGCGAGAAAAAAAAT
CTAATTCCAGAGCCGTCACGGACGTCGCTGGTCGCCGGTATGGTGTAATT
TGGGAATGACGCCATTTCTGCTTTTAGATCATTTTTGCCACAAAAATCTT
TTTCAAAATATGGTTAAAAGATACGTCACCCGGGAGGGATAGAGTCAAAC
TTTGANGTCGCTGGTCGCCGGTATGGTGTAATTTGGGAATGACGTCCTTT
CTGTTTTCTGATCATTTTTGCCACAAAAATCTTTTTCAAAATATGGTTAA
AAGATACTACACCCGGGAGGGATAGAGTCAAACTTTGAAGAGAATTCTTC
CCTTAAATTTTGATTTCATCGTGTTTAAGCCACCTTCCCAACTTCCAAAG
GACTTTAAATGCGTTCAGCAAACAGCTAAACCGGCGTGCGACGCCGGGTA
CCGGCTAGTTTTTATTATTAGTTTAACAAGTTTTTTATTCGCGATAAGAA
AGTCTGCACCATTGAGTTTAAATCCGAAAGTCCTATAAAAGAAAATTTGT
CAAGCAAGAAAAATTGAAGCCTAAAGCTTTGCGCTGCTTTTAGAGGTGCA
GTAGTGTAGTGGTCATCGTTCTTGACTTCCGTGCTGGAGGTCAGGGTTCG
ATTCCCACTCGGTGCTGCGATTCACTTGGCAAGTGAATGTACCTTGGCCT
CGGTCAACCCATACCATGTGAGGGGAATATGGTACCATCACTCTGATACA
AGAGTATGGGGAGATATGCTGGGCATTGAATGTGGTGTAGTGATGGTACT
CATATGTTCAGTACCTGCGAGAACGCAAGGTTTTCCCGTACAGTGCGAGT
ATCATCGATACAGCACGGCTCTGATGTGTCGCGAGCACAGAGTAAAATGT
CTGGTAAGCGCTGTGATTTCCCTATCTAGGGGTAGGAAAATATCCCGGGA
TAGGGCCCGGTCCGATGATATCGGAGGGTCGGCTTCTCTCTCTCTCTATC
TTATCGTACTGTTGCTTTCTGTAGCCCATTGGTTGTATCCCGCAGTTGAT
TGGATTCTTGGAGAACCATCTCATTAAAATTGGAATCGCTTGTCTTGTCT
CTGGTCTGNTGTAGCCCATTGGTTGTATTCCGCAGTTGATTGGATTCTTG
GAGAACCATCTCATTAAAATTGGAATCGCTTGTCTTGTCTCTGGTCTGGC
TCAGGTAAGTTGAAAACTTTCTCAGAAATTAGCTTCTAAGAGCAAAGAGC
TATTAACCATCATATCAGAACGTTTAAATGATACCTTTAAACATTTTAAT
AGTAGCCAACCATTTCGAAAACAAAAGCTTTTACTGCACGAGAACGAAAA
TCAAGATTACAGAAACGCCATTGGCGTTTTATTACTTGAACTAGAGACAT
AAGTGAAACTTTCTATTCATGATATATACCGGGTGCGCCACAAAAAAGTT
TCTCTCTTTGAAACTAATTTTCTCGAAATCTAAAAATTTTAAAAGAACCA
TTCCTTTTTCATTGAAAAGAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NAAAGGTCATTTAGACAGCTAATTATAATTTTTAATGACTGAAACGAAAA
TACTGATGTATCATGTAATTATGCTTCTGTTTGATTTGATAGGTCGACTT
TAAACATTTTCGGGCAGTTTCTGAAAGTAACTTTTCTATTCAATTGAGCA
TAACTTTTGATCTAATAGATCAAATTTAATAAATAACCCATCAAAATTTA
AGTCTATCTTTCTTCTTTCCAATCAAATAGGAATTGGTTCTTTTAAATTT
TTTAGATTTCGAGAGAATTAGTTTCAAAGAGAGAAACTTTTTTGTGGCGC
ACCCGGTATGACGTAATGTTTTCTACGGAAACAATCCGGTTTTTTTTAAT
TTTAAACATTTTTTCTGTAACTCAAATCTTTCAAATTTGCCACTGCTGGC
AAAAACCGGGATGTTTCAGTGGAAAATATTACGTCATGAATATCGTCATG
AAGTGTGTAAACTTTGGAGATCTTTTTCTTCAAAATATCTTGATGATTGT
TTTCTTTTTTCAGATTATCTGTATCGTTCTTTCCATGTGGCTGTACCGTT
TGATCGTCGAGTTCCGTTAAACGGAAATACCAAAAACCTGGAAAAGATCA
CGAGTCCACGACATCATGGTAGTTTACAAGTTTCGATGAAATTTTTGAAT
GATAATGAAAGTATTTGGTGAAGAATAGCTTGAATGAAATCATAAAGGAA
AGTGTAGATTCAAAGTTTAATGAGAAAACTAGCTTTGGAACACTTTAGAA
TATTCTATCTACAGATTTTAATAGATGAATATACATATCTGTCAAAAGAC
AGTTTATTATATTTATGTAGTTGCATATAGAGGAACAAAATATTTTTAAT
GTGACACAAATTTTAAAAGAGAATCTTGTTCCGCCATTCAAGGAAGACCA
TTTTGCATTTTGTAGGATTTAGTCATAGTTTTGAAACCCTTTTTCATTTG
TTTTATTTGTTCATTTTTTAAGATATTTTTTTCTCTTTTTATTGGCTCCT
AAGCTTGTGGTTCTTTCCGTCGTAATTGCACTAGGAGACTTCCGAGTTGC
TAGGCTATATAAAATCTCGTCTATTGGAACACCCAGTCCCCATGTCTACC
TTTGAAAAAAGCCACTGGAAGCTTTAAATAACTATAGCCTTTTTATATCT
TTTAATTTTTTATATTAGTAATTTTTGTTTTTTAGAATTTTTTCTCCATC
TTCCCCTTTTTTAGATTGTACTATCAGTAGAGACGAGCTCCTTTTAGACT
TTTTACTGAGAGATTTTAGAGATGGAAAATGTCTTCCCCTTTTCGAAGGC
CAGCTTCCTTTCTCGAGTACTTTTGGCTGTATATAAAGTGAAGCAATGAA
TATTTTCTTTTTCACTGAGGAAGATTTATTCATTTATCTGAAGAAGGCTG
GTGAAAATCAAATAGGAAAATTACTTCCCAGAATCAAGGTTAGTTGTGTC
GTTTTTTAATGATTTCTCTGATCTGATCTTCTAATTTGAAAAGTGCTTTG
TTTCTAAATTGCCCTAGAATACACCCTTATTATTTTAAGAATTTTTTTAT
CTCAAAGATTTTATTGGTTTTTGTATAATAATACCCAATACTCTTTATTT
GTTTACTTTTTTATTTATTTGTTTTTATCTCTGTTTTTTTATTTACTTCA
CTTTTTGTTGCTTAATTTTTTGTTGTTTTTGAATTTTGAAAATGTTTAAC
AAATTTATTATAGTAAGCAGTTAGTGAATACCAAAAATATATTTTCCATC
TTCTTTCAAATTTTCACAGTCTCTGTTATGATTGATTGGTACCCAGTTAG
TAAGTTTAACTAAAAAATATATTTAATTTAGGTAGTCAGAGTTTCATGGT
GCTCAGGCACCAATCTTCAGAAAATGTATTCAACATTTTACTGATTTTTG
CGATAAGCAATAATTTCTTCAATTCAAACTTTCAAGATTTTGAAATTTAT
CACAGGCTTGTTAGCGGATTTTCATTTTCTCGTTATTCATTCATTTTTTT
CAATAAAGTTGTGAAAAAGGTGTTAATTTTTATGAAAATGAAAAAAATAG
AGATAGATAGAGATTCACGATGTTGAGAAACGAAATTAAAAGGTTTTCAG
TCTTATCAGTTGCTATAATATGGAAATGTTTTATTCAGGGTTATCTCTTA
TTCTTTCTAGCTAAGATTGATCATAGTTTTGAACCACACCATTATAACAC
TGATAAGATATCTTTTATATAGCTTAGTTGATAAAATGGCAATAGATGAC
AAGTTTGGGATTTATGTACTTCAAACGAGGCATTCTTAAGTTGTGTGGCC
AGATTTTTAAATAATTTCATGAATACATATCTCAACATGTTATCCGAGCT
GTATGCTTCTTTTAATTATTTTCCTGTTCCTTGTTTCGTACATGGAGACC
AGGTGGCAAACAGGCAGGCAGAAATATTAAAAAAAGTGTATTGCTTGCAG
CTCTAAGCTACATGTAATTGATAGTAATTAGTTGGTAGGTTCATTTTCTT
TAATGACATACTTCTATAATTATCATAAAAGTTTTTACTTATGACTTAGA
TATTGTGTCTTGTAAAGTCTATTTAAAAAAAAATTGGCACTTCGCACATT
TCGATACATTGTTTCTGACTTCTACTTGGGTTTTTTTTTACTTGATTCGA
TTGGGATAAAATATAAATACCTTACAAGAATGTTTTGTGTCTTGACAGGA
AAATTCCCATTCGCATATTTTTATATTGACGTCTTGGAGTGATGATTGGA
AAACCATAAATTTAATTGACGAAACGATTGACATTGATATCATAGTTTTG
TATCGATAATAAGTATAGTAGTCTAATACGTTGATCTTTTTGGTTAGTTA
TCAAGTTCTAGACTAATGGAGATTGTATTTTAACTGCTAAAAAACCGTCT
AGAAGAAAATTTGCTTGAGGTATCAGATGTTTTTGAAGAGAGCTCAAACT
CGTATAGAATATTGAGGAAGTAAATAGAACTATGGCTTCCAAGGTAACAG
CAATTTGTTATCTTGCTGAAAATGCATCAGGCTTTGTATTGAAATTATTT
CTACGTCGACAATAATTTTTCCCTTGGGAAATAATTAATTAATTAAAGTT
GATTTAATTAAAGAACCCGATCATCTCGAAAATATCTGCAAGTAAAGAAG
TATGTACAACGTTGATTGAAACAGTGAAACACTTAAACTAAAGTTAGTGA
CTTATGAAATTGTTGAGCTGTACTGGAAAAGCTGAAGACATCATTTTGTT
CAGTTTGTTGACATAGTAGATTGGTGAATGTCACAGTGAAAGAAAAACAC
AAGAGCAGAAACTTTCGGATGAGGATAATCTGTCGCGAAAATAAAACTTA
ATTATAGAGACTCTTGAAAAATATTCTCACAAGCTCTATTACAGATTACA
GTCAAGATTTTTAAAGCTGTTGGGACTTTAGGTAGAAAATTTGATGTGAT
TTTCGTCCAAGACATTCTTTCACAACTTCAGTTTAGCTAGATGATGTTTG
TATCTTTTTCACAGAATCTATATTGCTAGAATGGATATATTGCCATAAAG
AGATATTGTTGTTAAAAATATTTTTCTAACATTCTTCTACTTGATTTAGT
TCTCTTATGTGAATGAATAAGTTTGATTCTTTATTTTGCCGCGTATTTTG
CCTCCCAATAGTTCAATAAATTGGCGTCAGTACGTCGCTCAAGTTTAAGT
TTACCTTATTCTATTAGCCATTTTGTAAATACATTCCTTCAATACCTTTC
TTTTTTGGATTTAAAAGCTTTTTTTTGAATTATATTATGCTATATACGAA
GCATGTATGATTTATATCTTAGAATCAAAGGCGACATTTAATCTAACNCA
TCAGGCTTTGTATTGAAATTATTTCTACGTCGACAATAATTTTTCCCTTG
GGAAATAATTAATTAATTAAAGTTGATTTGATTAAAGAGCCCGATCATCT
CGAAAATATCTGCAAGTAAAGAAGTATGTACAACGTTGATTGAAACAGTG
AAACACTTAAACTAAAGTTAGTGACTTATGAAATTGTTGAGCTGTACTGG
AAAAGCTGAAGACATCATTTTGTTCAGTTTGTTGACATAGTAGATTGGTG
AATGTCACAGTGAAAGAAAAACACAAGAGCAGAAACTTTCGGATGAGGAT
AATCTGTCGCGAAAATAAAACTTAATTATAGAGACTCTTGAAAAATATTC
TCACAAGCTCTATTACAGATTACAGTCAAGATTTTTAAAGCTGTTGGGAC
TTTAGGTAGAAAATTTGATGTGATTTTCGTCCAAGACATTCTTTCACAAC
TTCAGTTTAGCTAGATGATGTTTGTATCTTTTTCACAGAATCTATATTGC
TAGAATGGATATATTGTCATAAAGAGATATTGCTGTTAAAAATATTTTTC
TAACATTCTTCTACTTGATTTAGTTCTCTTATGTGAATGAATAAGTTTGA
TTCTTTATTTTGCCTCCCAATAGTTCAATAAATTGGCGTCAGTACGTCGC
TCAAGTTTAAGTTTACCTTATTCTATTAGCCATTTTGTAAATACATTCCT
TCAATACCTTTCTTTTTTGGAGTTAAAAGCTTTTTTTCGAATTGTATTCT
ATGCTGTATACGAAGCATGTATGATTCATATCAAATATATCTTAGAATCA
AAGGCGACATTTAATCTAAAGTTTCATCTCTTTTACAGCACGATTGTAAA
ACACAAACAAGAGAAAGTTGTTTTTCGTAACATCCTCTATTCGTCTGAAA
CTCCTATCCAAAATGCCGGACACCGAACAAGATGTAACCACTGACAACAA
TAATAACAAAGAACAGTGTGGAAAAGTAGATTCTCCTCCACCCCCGCCCG
TCATCGCTCCACGGAAAGATGACATGAAATCAACTTCAATGGCGAACTAC
CGGCAAGTCAAACGCATGAATAAGAAGAAATCCTCATCAAGATTAAACAG
TCGATCTTCGAATGGTTCGATCAATATCGAAAACGCAAATTCATCGACCC
AAGCATGAAGCATCTTACTATATTTTGAAAGTTTTATCAGATGATGGTGT
ATTGTGTATTGTGTTTAATACATACAACGACATACAAATGCTGCATAAAA
AGATTGGATTCGAGTTTGCTAAGGTTGAGTGACTTATTGACAAAATTTAT
TGATTCTCCTTTAGTAAACTAGAACCCAATCTCCTGTCTCTAGTGTTAAG
ATATTTGAACCCCTAGATTTCCCATTAGGGATTCGATTCATCACAGTGGA
AATTGATAATATTTAAAACTTTTGTTGTGCTTTTGTATATGAACCATGAC
GAATTAAGTTGTCACTTGTCTTCGATTCTCTCTACATATTTGTAAAAACG
AAAAATTGTATATATTGATATGAAAGTAGAATAGTTTTTCTCAATAATTT
TTTGTCCAAAAGACATGCATTACAAAAACCAAATTCTAGTTATGTATTAC
ACCCCCTTCTCACAGAACCGATAGGATTTCTTCAGC

Coding sequence (CDS) from alignment at sc0000357:35789..47824-

>TCONS_00020511 ID=TCONS_00020511|Name=TCONS_00020511|organism=Clytia hemisphaerica|type=CDS|length=5502bp|location=Sequence derived from alignment at sc0000357:35789..47824- (Clytia hemisphaerica)
ATTATCTGTATCGTTCTTTCCATGTGGCTGTACCGTTTGATCGTCGAGTT
CCGTTAACCCATTGGTTGTATTCCGCAGTTGATTGGATTCTTGGAGAACC
ATCTCATTAAAATTGGAATCGCTTGTCTTGTCTCTGGTCTGGCTCAGTAT
CAATGCTGTGGGGACGCCGACTACCAAGTATGGAAACGAACTGAATGGCA
CAAACAGGATCCTCCCAAAACCAAACCCAATGTACCGGATGACCAACAAA
TGAAAGTTCCGGATTCTTGTTGTATTACAGCGGATCAGAAGGATTGCGGA
CATCGCATACATCCGTCGAATATTTGGAGGAATGATCTTAAGGTCCAGGA
AGAGATCACACGTAATCTGAACATTGAAATGGTTTCAAATTACGGAAAAC
CAGGGAATGAGAAGAAGACAGATGCCATCGACATGCTACAAAAATCATTC
TTTCTGATGATTATCATTGTTTGTTTGTTGGAGATTGTTGGTGGAATCCT
TGCTTATGTTTACCGGAAAGATTTATTTGCCATTGGAATCTTTGGCTTTG
GTGTTTGGTTTTTGGTGACGCAGAACCACTATGAGCCCATTCTTGGTAGT
ATGACTTACATTACAACTCTGGGTTTGATGTTGGCTGCAGGTCTCTTTTC
AATGTTTGTCTGTATCTTTGGTATCATTGGTGCAGTACGTGAAAGCAGGT
TCATGGTTCTCGGAATGGCTAAGCAAGGCTGTGTGACGGTCAGTTGTGTC
AAAACATGGTTCCTTGTATTTACAGCTGTTTTGCTGATTATCTGTATCGT
TCTTTCCATGTGGCTGTACCGTTTGATCGTCGAGTTCCGTTAACCCATTG
GTTGTATTCCGCAGTTGATTGGATTCTTGGAGAACCATCTCATTAAAATT
GGAATCGCTTGTCTTGTCTCTGGTCTGGCTCAGTATCAATGCTGTGGGGA
CGCCGACTACCAAGTATGGAAACGAACTGAATGGCACAAACAGGATCCTC
CCAAAACCAAACCCAATGTACCGGATGACCAACAAATGAAAGTTCCGGAT
TCTTGTTGTATTACAGCGGATCAGAAGGATTGCGGACATCGCATACATCC
GTCGAATATTTGGAGGAATGATCTTAAGGTCCAGGAAGAGATCACACGTA
ATCTGAACATTGAAATGGTTTCAAATTACGGAAAACCAGGGAATGAGAAG
AAGACAGATGCCATCGACATGCTACAAAAATCATTCTTTCTGATGATTAT
CATTGTTTGTTTGTTGGAGATTGTTGGTGGAATCCTTGCTTATGTTTACC
GGAAAGATTTATTTGCCATTGGAATCTTTGGCTTTGGTGTTTGGTTTTTG
GTGACGCAGAACCACTATGAGCCCATTCTTGGTAGTATGACTTACATTAC
AACTCTGGGTTTGATGTTGGCTGCAGGTCTCTTTTCAATGTTTGTCTGTA
TCTTTGGTATCATTGGTGCAGTACGTGAAAGCAGGTTCATGGTTCTCGGA
ATGGCTAAGCAAGGCTGTGTGACGGTCAGTTGTGTCAAAACATGGTTCCT
TGTATTTACAGCTGTTTTGCTGATTATCTGTATCGTTCTTTCCATGTGGC
TGTACCGTTTGATCGTCGAGTTCCGTTAACCCATTGGTTGTATTCCGCAG
TTGATTGGATTCTTGGAGAACCATCTCATTAAAATTGGAATCGCTTGTCT
TGTCTCTGGTCTGGCTCAGTATCAATGCTGTGGGGACGCCGACTACCAAG
TATGGAAACGAACTGAATGGCACAAACAGGATCCTCCCAAAACCAAACCC
AATGTACCGGATGACCAACAAATGAAAGTTCCGGATTCTTGTTGTATTAC
AGCGGATCAGAAGGATTGCGGACATCGCATACATCCGTCGAATATTTGGA
GGAATGATCTTAAGGTCCAGGAAGAGATCACACGTAATCTGAACATTGAA
ATGGTTTCAAATTACGGAAAACCAGGGAATGAGAAGAAGACAGATGCCAT
CGACATGCTACAAAAATCATTCTTTCTGATGATTATCATTGTTTGTTTGT
TGGAGATTGTTGGTGGAATCCTTGCTTATGTTTACCGGAAAGATTTATTT
GCCATTGGAATCTTTGGCTTTGGTGTTTGGTTTTTGGTGACGCAGAACCA
CTATGAGCCCATTCTTGGTAGTATGACTTACATTACAACTCTGGGTTTGA
TGTTGGCTGCAGGTCTCTTTTCAATGTTTGTCTGTATCTTTGGTATCATT
GGTGCAGTACGTGAAAGCAGGTTCATGGTTCTCGGAATGGCTAAGCAAGG
CTGTGTGACGGTCAGTTGTGTCAAAACATGGTTCCTTGTATTTACAGCTG
TTTTGCTGATTATCTGTATCGTTCTTTCCATGTGGCTGTACCGTTTGATC
GTCGAGTTCCGTTAACCCATTGGTTGTATTCCGCAGTTGATTGGATTCTT
GGAGAACCATCTCATTAAAATTGGAATCGCTTGTCTTGTCTCTGGTCTGG
CTCAGTATCAATGCTGTGGGGACGCCGACTACCAAGTATGGAAACGAACT
GAATGGCACAAACAGGATCCTCCCAAAACCAAACCCAATGTACCGGATGA
CCAACAAATGAAAGTTCCGGATTCTTGTTGTATTACAGCGGATCAGAAGG
ATTGCGGACATCGCATACATCCGTCGAATATTTGGAGGAATGATCTTAAG
GTCCAGGAAGAGATCACACGTAATCTGAACATTGAAATGGTTTCAAATTA
CGGAAAACCAGGGAATGAGAAGAAGACAGATGCCATCGACATGCTACAAA
AATCATTCTTTCTGATGATTATCATTGTTTGTTTGTTGGAGATTGTTGGT
GGAATCCTTGCTTATGTTTACCGGAAAGATTTATTTGCCATTGGAATCTT
TGGCTTTGGTGTTTGGTTTTTGGTGACGCAGAACCACTATGAGCCCATTC
TTGGTAGTATGACTTACATTACAACTCTGGGTTTGATGTTGGCTGCAGGT
CTCTTTTCAATGTTTGTCTGTATCTTTGGTATCATTGGTGCAGTACGTGA
AAGCAGGTTCATGGTTCTCGGAATGGCTAAGCAAGGCTGTGTGACGGTCA
GTTGTGTCAAAACATGGTTCCTTGTATTTACAGCTGTTTTGCTGATTATC
TGTATCGTTCTTTCCATGTGGCTGTACCGTTTGATCGTCGAGTTCCGTTA
ACCCATTGGTTGTATTCCGCAGTTGATTGGATTCTTGGAGAACCATCTCA
TTAAAATTGGAATCGCTTGTCTTGTCTCTGGTCTGGCTCAGTATCAATGC
TGTGGGGACGCCGACTACCAAGTATGGAAACGAACTGAATGGCACAAACA
GGATCCTCCCAAAACCAAACCCAATGTACCGGATGACCAACAAATGAAAG
TTCCGGATTCTTGTTGTATTACAGCGGATCAGAAGGATTGCGGACATCGC
ATACATCCGTCGAATATTTGGAGGAATGATCTTAAGGTCCAGGAAGAGAT
CACACGTAATCTGAACATTGAAATGGTTTCAAATTACGGAAAACCAGGGA
ATGAGAAGAAGACAGATGCCATCGACATGCTACAAAAATCATTCTTTCTG
ATGATTATCATTGTTTGTTTGTTGGAGATTGTTGGTGGAATCCTTGCTTA
TGTTTACCGGAAAGATTTATTTGCCATTGGAATCTTTGGCTTTGGTGTTT
GGTTTTTGGTGACGCAGAACCACTATGAGCCCATTCTTGGTAGTATGACT
TACATTACAACTCTGGGTTTGATGTTGGCTGCAGGTCTCTTTTCAATGTT
TGTCTGTATCTTTGGTATCATTGGTGCAGTACGTGAAAGCAGGTTCATGG
TTCTCGGAATGGCTAAGCAAGGCTGTGTGACGGTCAGTTGTGTCAAAACA
TGGTTCCTTGTATTTACAGCTGTTTTGCTGATTATCTGTATCGTTCTTTC
CATGTGGCTGTACCGTTTGATCGTCGAGTTCCGTTAACCCATTGGTTGTA
TTCCGCAGTTGATTGGATTCTTGGAGAACCATCTCATTAAAATTGGAATC
GCTTGTCTTGTCTCTGGTCTGGCTCAGTATCAATGCTGTGGGGACGCCGA
CTACCAAGTATGGAAACGAACTGAATGGCACAAACAGGATCCTCCCAAAA
CCAAACCCAATGTACCGGATGACCAACAAATGAAAGTTCCGGATTCTTGT
TGTATTACAGCGGATCAGAAGGATTGCGGACATCGCATACATCCGTCGAA
TATTTGGAGGAATGATCTTAAGGTCCAGGAAGAGATCACACGTAATCTGA
ACATTGAAATGGTTTCAAATTACGGAAAACCAGGGAATGAGAAGAAGACA
GATGCCATCGACATGCTACAAAAATCATTCTTTCTGATGATTATCATTGT
TTGTTTGTTGGAGATTGTTGGTGGAATCCTTGCTTATGTTTACCGGAAAG
ATTTATTTGCCATTGGAATCTTTGGCTTTGGTGTTTGGTTTTTGGTGACG
CAGAACCACTATGAGCCCATTCTTGGTAGTATGACTTACATTACAACTCT
GGGTTTGATGTTGGCTGCAGGTCTCTTTTCAATGTTTGTCTGTATCTTTG
GTATCATTGGTGCAGTACGTGAAAGCAGGTTCATGGTTCTCGGAATGGCT
AAGCAAGGCTGTGTGACGGTCAGTTGTGTCAAAACATGGTTCCTTGTATT
TACAGCTGTTTTGCTGATTATCTGTATCGTTCTTTCCATGTGGCTGTACC
GTTTGATCGTCGAGTTCCGTTAACCCATTGGTTGTATTCCGCAGTTGATT
GGATTCTTGGAGAACCATCTCATTAAAATTGGAATCGCTTGTCTTGTCTC
TGGTCTGGCTCAGTATCAATGCTGTGGGGACGCCGACTACCAAGTATGGA
AACGAACTGAATGGCACAAACAGGATCCTCCCAAAACCAAACCCAATGTA
CCGGATGACCAACAAATGAAAGTTCCGGATTCTTGTTGTATTACAGCGGA
TCAGAAGGATTGCGGACATCGCATACATCCGTCGAATATTTGGAGGAATG
ATCTTAAGGTCCAGGAAGAGATCACACGTAATCTGAACATTGAAATGGTT
TCAAATTACGGAAAACCAGGGAATGAGAAGAAGACAGATGCCATCGACAT
GCTACAAAAATCATTCTTTCTGATGATTATCATTGTTTGTTTGTTGGAGA
TTGTTGGTGGAATCCTTGCTTATGTTTACCGGAAAGATTTATTTGCCATT
GGAATCTTTGGCTTTGGTGTTTGGTTTTTGGTGACGCAGAACCACTATGA
GCCCATTCTTGGTAGTATGACTTACATTACAACTCTGGGTTTGATGTTGG
CTGCAGGTCTCTTTTCAATGTTTGTCTGTATCTTTGGTATCATTGGTGCA
GTACGTGAAAGCAGGTTCATGGTTCTCGGAATGGCTAAGCAAGGCTGTGT
GACGGTCAGTTGTGTCAAAACATGGTTCCTTGTATTTACAGCTGTTTTGC
TG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_011512XLOC_011512Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00020511-proteinTCONS_00020511-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00020511-exon-sc0000357-1575043694:47734..47824TCONS_00020511-exon-sc0000357-1575043694:47734..47824Clytia hemisphaericaexon
TCONS_00020511-exon-sc0000357-1575043694:47124..47315TCONS_00020511-exon-sc0000357-1575043694:47124..47315Clytia hemisphaericaexon
TCONS_00020511-exon-sc0000357-1575043694:46615..46689TCONS_00020511-exon-sc0000357-1575043694:46615..46689Clytia hemisphaericaexon
TCONS_00020511-exon-sc0000357-1575043694:46260..46364TCONS_00020511-exon-sc0000357-1575043694:46260..46364Clytia hemisphaericaexon
TCONS_00020511-exon-sc0000357-1575043694:45317..45511TCONS_00020511-exon-sc0000357-1575043694:45317..45511Clytia hemisphaericaexon
TCONS_00020511-exon-sc0000357-1575043694:43221..43310TCONS_00020511-exon-sc0000357-1575043694:43221..43310Clytia hemisphaericaexon
TCONS_00020511-exon-sc0000357-1575043694:40657..40761TCONS_00020511-exon-sc0000357-1575043694:40657..40761Clytia hemisphaericaexon
TCONS_00020511-exon-sc0000357-1575043694:35789..36586TCONS_00020511-exon-sc0000357-1575043694:35789..36586Clytia hemisphaericaexon
TCONS_00020511-exon-sc0000357-1510915933:47734..47824TCONS_00020511-exon-sc0000357-1510915933:47734..47824Clytia hemisphaericaexon
TCONS_00020511-exon-sc0000357-1510915933:47124..47315TCONS_00020511-exon-sc0000357-1510915933:47124..47315Clytia hemisphaericaexon
TCONS_00020511-exon-sc0000357-1510915933:46615..46689TCONS_00020511-exon-sc0000357-1510915933:46615..46689Clytia hemisphaericaexon
TCONS_00020511-exon-sc0000357-1510915933:46260..46364TCONS_00020511-exon-sc0000357-1510915933:46260..46364Clytia hemisphaericaexon
TCONS_00020511-exon-sc0000357-1510915933:45317..45511TCONS_00020511-exon-sc0000357-1510915933:45317..45511Clytia hemisphaericaexon
TCONS_00020511-exon-sc0000357-1510915933:43221..43310TCONS_00020511-exon-sc0000357-1510915933:43221..43310Clytia hemisphaericaexon
TCONS_00020511-exon-sc0000357-1510915933:40657..40761TCONS_00020511-exon-sc0000357-1510915933:40657..40761Clytia hemisphaericaexon
TCONS_00020511-exon-sc0000357-1510915933:35789..36586TCONS_00020511-exon-sc0000357-1510915933:35789..36586Clytia hemisphaericaexon
TCONS_00020511-exon-sc0000357-1491911889:47734..47824TCONS_00020511-exon-sc0000357-1491911889:47734..47824Clytia hemisphaericaexon
TCONS_00020511-exon-sc0000357-1491911889:47124..47315TCONS_00020511-exon-sc0000357-1491911889:47124..47315Clytia hemisphaericaexon
TCONS_00020511-exon-sc0000357-1491911889:46615..46689TCONS_00020511-exon-sc0000357-1491911889:46615..46689Clytia hemisphaericaexon
TCONS_00020511-exon-sc0000357-1491911889:46260..46364TCONS_00020511-exon-sc0000357-1491911889:46260..46364Clytia hemisphaericaexon
TCONS_00020511-exon-sc0000357-1491911889:45317..45511TCONS_00020511-exon-sc0000357-1491911889:45317..45511Clytia hemisphaericaexon
TCONS_00020511-exon-sc0000357-1491911889:43221..43310TCONS_00020511-exon-sc0000357-1491911889:43221..43310Clytia hemisphaericaexon
TCONS_00020511-exon-sc0000357-1491911889:40657..40761TCONS_00020511-exon-sc0000357-1491911889:40657..40761Clytia hemisphaericaexon
TCONS_00020511-exon-sc0000357-1491911889:35789..36586TCONS_00020511-exon-sc0000357-1491911889:35789..36586Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000357supercontigsc0000357:35789..47824 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
6.87862	6.6506	4.06937	4.62416	43.1218	37.9503	50.3148	46.4251	45.5652	49.18	31.0589	33.0177	44.3911	44.7008	24.5414	18.4283	27.2395	40.27	40.3028	50.1745	35.8803	35.9122	20.3246	23.4651	21.1694	20.1112	60.1817	52.9222	3.31694	5.90821
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000301Tetraspanin
IPR018499Tetraspanin/Peripherin
IPR008952Tetraspanin_EC2
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane
Blast
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BLAST of TCONS_00020511 vs. Swiss-Prot (Human)
Match: TSN11 (Tetraspanin-11 OS=Homo sapiens GN=TSPAN11 PE=2 SV=2)

HSP 1 Score: 125.946 bits (315), Expect = 1.494e-32
Identity = 68/225 (30.22%), Postives = 124/225 (55.11%), Query Frame = 2 
Query:  104 GIFGFGVWFLVTQNHYEPILGSMTYITTLGLMLAAGLFSMFVCIFGIIGAVRESRFMVLGFFLMIIIVCLLEIVGGILAYVYRKDVQEEITRNLNIEMVSNYGKPGNEKKTDAIDMLQKSYQCCGDADYQVWKRTEWHKQDPPKTKPNVPDDQQMKVPDSCCITADQKDCGHRIHPSNIWRNDLKPIGCIPQLIGFLENHL-----IKIGIACL-VSGLAQIICI 760
             +   G+W LV ++ Y  +L S T+  +  +++ AG+  M     G    + E +  +  +F +++++ L+E+V G+LA+VY + + +E+ ++LN  +  NYG+PG  + T ++D LQ+ ++CCG      W+ +         T   + + +  +VPDSCC T   + CG R HPSNI++ +    GC+ +L  FL +HL     + IG+ACL + G+    C+
Sbjct:   33 AVLAVGIWTLVEKSGYLSVLASSTFAASAYILIFAGVLVMVTGFLGFGAILWERKGCLSTYFCLLLVIFLVELVAGVLAHVYYQRLSDELKQHLNRTLAENYGQPGATQITASVDRLQQDFKCCGSNSSADWQHS---------TYILLREAEGRQVPDSCCKTVVVR-CGQRAHPSNIYKVE---GGCLTKLEQFLADHLLLMGAVGIGVACLQICGMVLTCCL 244
The following BLAST results are available for this feature:
BLAST of TCONS_00020511 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TSN111.494e-3230.22Tetraspanin-11 OS=Homo sapiens GN=TSPAN11 PE=2 SV=... [more]
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