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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00020510 ID=TCONS_00020510|Name=TCONS_00020510|organism=Clytia hemisphaerica|type=transcript|length=1185bp
TTATTTCTACGTCGACAATAATTTTTCCCTTGGgaaataattaattaatt
aaagtTGATTTAATTAAAGAACCCGATCATCTCGAAAATATCTGCAAGTA
AAGAAGTATGTACAACGTTGATTGAAACAGTGAAACACTTAAACTAAAGT
TAGTGACTTATGAAATTGTTGAGCTGTACTGGAAAAGCTGAAGACATCAT
TTTGTTCAGTTTGTTGACATAGTAGATTGGTGAATGTCACAGTGAAAGAA
AAACACaagagcagaaactttcggATGAGGATAATCTGTCGCGAAAATAA
AACTTAATTATAGAGactcttgaaaaatattctcaCAAGCTCTATTACAG
ATTACAGTCAAGATTTTTAAAGCTGTTGGGACTTTAGCACGATTGTAAAA
CACAAACAAGAGAAAGTTGTTTTTCGTAACATCCTCTATTCGTCTGAAAC
TCCTATCCAAAATGCCGGACACCGAACAAGATGTAACCACTGACAACAAT
AATAACAAAGAACAGTGTGGAAAAGTAGATTCTCCTCCACCCCCGCCCGT
CATCGCTCCACGGAAAGATGACATGAAATCAACTTCAATGGCGAACTACC
GGCAAGTCAAACGCATGAATAAGAAGAAATCCTCATCAAGATTAAACAGT
CGATCTTCGAATGGTTCGATCAATATCGAAAACGCAAATTCATCGACCCA
AGCATGAAGCATCTTActatattttgaaagttttatcaGATGATGGTGTA
TTGTGTATTGTGTTTAATACATACAACGACATACAAATGCTGCATAAAAA
GATTGGATTCGAGTTTGCTAAGGTTGAGTGACTTattgacaaaatttatt
gattctCCTTTAGTAAACTAGAACCCAATCTCCTGTCTCTAGTGTTAAGA
TATTTGAACCCCTAGATTTCCCATTAGGGATTCGATTCATCACAGTGGAA
ATTGATaatatttaaaacttttgttgtgCTTTTGTATATGAACCATGACG
AATTAAGTTGTCACTTGTCTTCGATTCTCTCTACATATTTGTAAAAACGA
AAAATTGTATATATTGATATGAAAGTAGAATAGTTTTTCTCAataatttt
ttgtccaaaagACATGCATTACAAAAACCAAATTCTAGTTATgtattaca
cccccttctcacagaaccgATAGGATTTCTTCAGC Run BLAST on NCBI transcript from alignment at sc0000357:35789..38230- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00020510 ID=TCONS_00020510|Name=TCONS_00020510|organism=Clytia hemisphaerica|type=transcript|length=2442bp|location=Sequence derived from alignment at sc0000357:35789..38230- (Clytia hemisphaerica)
TTATTTCTACGTCGACAATAATTTTTCCCTTGGGAAATAATTAATTAATT
AAAGTTGATTTAATTAAAGAACCCGATCATCTCGAAAATATCTGCAAGTA
AAGAAGTATGTACAACGTTGATTGAAACAGTGAAACACTTAAACTAAAGT
TAGTGACTTATGAAATTGTTGAGCTGTACTGGAAAAGCTGAAGACATCAT
TTTGTTCAGTTTGTTGACATAGTAGATTGGTGAATGTCACAGTGAAAGAA
AAACACAAGAGCAGAAACTTTCGGATGAGGATAATCTGTCGCGAAAATAA
AACTTAATTATAGAGACTCTTGAAAAATATTCTCACAAGCTCTATTACAG
ATTACAGTCAAGATTTTTAAAGCTGTTGGGACTTTAGGTAGAAAATTTGA
TGTGATTTTCGTCCAAGACATTCTTTCACAACTTCAGTTTAGCTAGATGA
TGTTTGTATCTTTTTCACAGAATCTATATTGCTAGAATGGATATATTGCC
ATAAAGAGATATTGTTGTTAAAAATATTTTTCTAACATTCTTCTACTTGA
TTTAGTTCTCTTATGTGAATGAATAAGTTTGATTCTTTATTTTGCCGCGT
ATTTTGCCTCCCAATAGTTCAATAAATTGGCGTCAGTACGTCGCTCAAGT
TTAAGTTTACCTTATTCTATTAGCCATTTTGTAAATACATTCCTTCAATA
CCTTTCTTTTTTGGATTTAAAAGCTTTTTTTTGAATTATATTATGCTATA
TACGAAGCATGTATGATTTATATCTTAGAATCAAAGGCGACATTTAATCT
AACNCATCAGGCTTTGTATTGAAATTATTTCTACGTCGACAATAATTTTT
CCCTTGGGAAATAATTAATTAATTAAAGTTGATTTGATTAAAGAGCCCGA
TCATCTCGAAAATATCTGCAAGTAAAGAAGTATGTACAACGTTGATTGAA
ACAGTGAAACACTTAAACTAAAGTTAGTGACTTATGAAATTGTTGAGCTG
TACTGGAAAAGCTGAAGACATCATTTTGTTCAGTTTGTTGACATAGTAGA
TTGGTGAATGTCACAGTGAAAGAAAAACACAAGAGCAGAAACTTTCGGAT
GAGGATAATCTGTCGCGAAAATAAAACTTAATTATAGAGACTCTTGAAAA
ATATTCTCACAAGCTCTATTACAGATTACAGTCAAGATTTTTAAAGCTGT
TGGGACTTTAGGTAGAAAATTTGATGTGATTTTCGTCCAAGACATTCTTT
CACAACTTCAGTTTAGCTAGATGATGTTTGTATCTTTTTCACAGAATCTA
TATTGCTAGAATGGATATATTGTCATAAAGAGATATTGCTGTTAAAAATA
TTTTTCTAACATTCTTCTACTTGATTTAGTTCTCTTATGTGAATGAATAA
GTTTGATTCTTTATTTTGCCTCCCAATAGTTCAATAAATTGGCGTCAGTA
CGTCGCTCAAGTTTAAGTTTACCTTATTCTATTAGCCATTTTGTAAATAC
ATTCCTTCAATACCTTTCTTTTTTGGAGTTAAAAGCTTTTTTTCGAATTG
TATTCTATGCTGTATACGAAGCATGTATGATTCATATCAAATATATCTTA
GAATCAAAGGCGACATTTAATCTAAAGTTTCATCTCTTTTACAGCACGAT
TGTAAAACACAAACAAGAGAAAGTTGTTTTTCGTAACATCCTCTATTCGT
CTGAAACTCCTATCCAAAATGCCGGACACCGAACAAGATGTAACCACTGA
CAACAATAATAACAAAGAACAGTGTGGAAAAGTAGATTCTCCTCCACCCC
CGCCCGTCATCGCTCCACGGAAAGATGACATGAAATCAACTTCAATGGCG
AACTACCGGCAAGTCAAACGCATGAATAAGAAGAAATCCTCATCAAGATT
AAACAGTCGATCTTCGAATGGTTCGATCAATATCGAAAACGCAAATTCAT
CGACCCAAGCATGAAGCATCTTACTATATTTTGAAAGTTTTATCAGATGA
TGGTGTATTGTGTATTGTGTTTAATACATACAACGACATACAAATGCTGC
ATAAAAAGATTGGATTCGAGTTTGCTAAGGTTGAGTGACTTATTGACAAA
ATTTATTGATTCTCCTTTAGTAAACTAGAACCCAATCTCCTGTCTCTAGT
GTTAAGATATTTGAACCCCTAGATTTCCCATTAGGGATTCGATTCATCAC
AGTGGAAATTGATAATATTTAAAACTTTTGTTGTGCTTTTGTATATGAAC
CATGACGAATTAAGTTGTCACTTGTCTTCGATTCTCTCTACATATTTGTA
AAAACGAAAAATTGTATATATTGATATGAAAGTAGAATAGTTTTTCTCAA
TAATTTTTTGTCCAAAAGACATGCATTACAAAAACCAAATTCTAGTTATG
TATTACACCCCCTTCTCACAGAACCGATAGGATTTCTTCAGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00020510-exon-sc0000357-1575043694:37844..38230 | TCONS_00020510-exon-sc0000357-1575043694:37844..38230 | Clytia hemisphaerica | exon |
| TCONS_00020510-exon-sc0000357-1575043694:35789..36586 | TCONS_00020510-exon-sc0000357-1575043694:35789..36586 | Clytia hemisphaerica | exon |
| TCONS_00020510-exon-sc0000357-1510915933:37844..38230 | TCONS_00020510-exon-sc0000357-1510915933:37844..38230 | Clytia hemisphaerica | exon |
| TCONS_00020510-exon-sc0000357-1510915933:35789..36586 | TCONS_00020510-exon-sc0000357-1510915933:35789..36586 | Clytia hemisphaerica | exon |
| TCONS_00020510-exon-sc0000357-1491911889:37844..38230 | TCONS_00020510-exon-sc0000357-1491911889:37844..38230 | Clytia hemisphaerica | exon |
| TCONS_00020510-exon-sc0000357-1491911889:35789..36586 | TCONS_00020510-exon-sc0000357-1491911889:35789..36586 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000357 | supercontig | sc0000357:35789..38230 - |
Blast
The following BLAST results are available for this feature:
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