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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00020445 ID=TCONS_00020445|Name=TCONS_00020445|organism=Clytia hemisphaerica|type=transcript|length=1084bp
TTAATCTTTATTATTAAATATTGACTTTAATCGAGCCATTAGGGTTGTCT
TGTATGTATGTCGGTCATCACATAGCGCAGGCTGAGTGGTTAAAAAATCC
TCTTTTGCTTCAAACTTGTTAGAGTGGAGTCTCCATAGCTCGAATGCCTC
TTCAACCCAATGCCTCGAACAAGTTGAGCCCCTTGAGTAAACAAGCCCTA
CAGTAAGTGAAACAAACAGCTCAAAATCAAACTTCTATATATCGAATGAA
TTTGCGTTCCCCTTTCAAGTTAAAAAGACCAAATTGTAGTATATGTCTCA
TGTAAAAGCAGATCTTTAAAAGCAAACAAGCTTTTTAAAACGCATTATCA
TTGCTCAAATAATGTTTTATTGATCCCGTTTttagaacaatcaaaattat
acCCTATCATCTAAGTGACAAAAATTCGACATCTAATTAAACTTAACCCG
ATAATAgctggtcataattttcttcacgcgcacggtaaacctctgaaagc
gcttgaaaattaaccatctgaggaaaatagtccttcagcggaaaattcta
caacaagaattttGCGATGCGTCGGAAaggcaaaaaacaaattttcttga
GATGGTGCTCTATTttcaaacacaatcacgcaactctTTTGTCATTgaca
gtccttttagacgagcGGGGTCCTTGCGATTTTGAGATAGCATTtttgtc
agattgttatgttttcacccatccctttagagcttcagcgtgatGGGCAG
AAAAcgatcacaatctgatctcaggtcaATTAAACCTGATCGAAAGATAT
AATATCGAGTTGCTGATTTAAAGAAAATAGCTTTATCTATACactccttt
tttataagaacaacttaaTGAGACTCAAAACTGcccaaaaaagggaaaat
ttatgGAATATGCTGAATTTCAAGGTAGTAAAAATAGGGGTTTAAACCTA
AAAAACCTGAATTCTGGCCTAGAAATAAGAACTgactcaaagtgccaaaa
attaATATATTGGAGTCACATcccgggggcactcgatttctaaacgacag
cATTAGCcgccaaaaaatggctattaaaatcgaa Run BLAST on NCBI transcript from alignment at sc0000356:205560..206643 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00020445 ID=TCONS_00020445|Name=TCONS_00020445|organism=Clytia hemisphaerica|type=transcript|length=1084bp|location=Sequence derived from alignment at sc0000356:205560..206643 (Clytia hemisphaerica)
ttcgattttaatagccattttttggcgGCTAATgctgtcgtttagaaatc
gagtgcccccgggATGTGACTCCAATATATtaatttttggcactttgagt
cAGTTCTTATTTCTAGGCCAGAATTCAGGTTTTTTAGGTTTAAACCCCTA
TTTTTACTACCTTGAAATTCAGCATATTCcataaattttcccttttttgg
gCAGTTTTGAGTCTCAttaagttgttcttataaaaaaggagtGTATAGAT
AAAGCTATTTTCTTTAAATCAGCAACTCGATATTATATCTTTCGATCAGG
TTTAATtgacctgagatcagattgtgatcgTTTTCTGCCCatcacgctga
agctctaaagggatgggtgaaaacataacaatctgacaaaAATGCTATCT
CAAAATCGCAAGGACCCCgctcgtctaaaaggactgtcAATGACAAAaga
gttgcgtgattgtgtttgaaAATAGAGCACCATCtcaagaaaatttgttt
tttgcctTTCCGACGCATCGCaaaattcttgttgtagaattttccgctga
aggactattttcctcagatggttaattttcaagcgctttcagaggtttac
cgtgcgcgtgaagaaaattatgaccagcTATTATCGGGTTAAGTTTAATT
AGATGTCGAATTTTTGTCACTTAGATGATAGGgtataattttgattgttc
taaAAACGGGATCAATAAAACATTATTTGAGCAATGATAATGCGTTTTAA
AAAGCTTGTTTGCTTTTAAAGATCTGCTTTTACATGAGACATATACTACA
ATTTGGTCTTTTTAACTTGAAAGGGGAACGCAAATTCATTCGATATATAG
AAGTTTGATTTTGAGCTGTTTGTTTCACTTACTGTAGGGCTTGTTTACTC
AAGGGGCTCAACTTGTTCGAGGCATTGGGTTGAAGAGGCATTCGAGCTAT
GGAGACTCCACTCTAACAAGTTTGAAGCAAAAGAGGATTTTTTAACCACT
CAGCCTGCGCTATGTGATGACCGACATACATACAAGACAACCCTAATGGC
TCGATTAAAGTCAATATTTAATAATAAAGATTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00020445-exon-sc0000356-1491911889:205560..206643 | TCONS_00020445-exon-sc0000356-1491911889:205560..206643 | Clytia hemisphaerica | exon |
| TCONS_00020445-exon-sc0000356-1510915933:205560..206643 | TCONS_00020445-exon-sc0000356-1510915933:205560..206643 | Clytia hemisphaerica | exon |
| TCONS_00020445-exon-sc0000356-1575043694:205560..206643 | TCONS_00020445-exon-sc0000356-1575043694:205560..206643 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000356 | supercontig | sc0000356:205560..206643 . |
Blast
The following BLAST results are available for this feature:
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