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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00020362 ID=TCONS_00020362|Name=TCONS_00020362|organism=Clytia hemisphaerica|type=transcript|length=995bp
GAAGCGTCGAACACAATACGGCACGGAGTTGACACTGAGTTCTCCTTCCA
TACTGCGCGCCATGGAATAAAGTTGTTGATATTGGTGTTTCGAAGTGTAT
GTTGTACATCTGGGCTGAGGTTCTTTAAATAATCCACGTAGCCAAGAGTT
TGAAGTTTTTGCTCTGAGTTGAGGACATCTTCCTTGTCTTTGGAGTACTT
TGATAACCGTCTCAGTTGTTGGTTGTAGAtctggagtgcaatttttctat
TTGGAGAAAGATATAATGATGGGTCATGTAGAAGTGGTAAAAATGCAGTT
GAATTTTGCTTGCAAACATCAACATTGATTGATTCATTGATAACATGTTG
TTCAACTTCTTCTTGTACACTCATGACCTCGTCAGTTGTCGAAAGTTCCT
TACAGGATTTACAGCCACGACAGTCGATACATCTGTATTGGAATTCGCTT
CCAACGTCttgtgattggttgaaaaattcagaCTTCTCTTCAATGGCTGA
GTTTGATGTAATGAAGATGTCCGTATTCTTGTTGGTGTATCCGAGCAGGT
GAAGGTCAGGATTGACATGATATCCCAACTTAAACAGCTCGTGTtgatca
atgatgaatttattggtGTTGAAATGGTGATCTTTGATGTTCTTGAAGAC
AGGGTGTGGACCACCAATAACGCCGGTTGATCCGTCTGGACTTTTGAAGC
ATGATATGTAAATTGTCAGTCCTGATGGCATCTTGAATACCTCCTCCGGG
AAGTATCTTGAATATTTGATGCCGATCATAAAATCTGTATGACCACCAAC
TTGTTTTGGGACCAGAGGAAGATTGCATGGATCACCACCAGATTTGGCAT
AATCTTTACGAATGTCGTTGATGACTTCACCGTCCAATTTGTATGTCGGA
AACTTCTGAGTGATTTGGTCCAAGCATGGTCCAACGAGAGTTGCATCTGT
TCCATCAATGAGTGGAAGATCAATTTTGTAGGTGCCGTGCTTGCT Run BLAST on NCBI protein sequence of TCONS_00020362-protein >TCONS_00020362-protein ID=TCONS_00020362-protein|Name=TCONS_00020362-protein|organism=Clytia hemisphaerica|type=polypeptide|length=331bp
SKHGTYKIDLPLIDGTDATLVGPCLDQITQKFPTYKLDGEVINDIRKDYA
KSGGDPCNLPLVPKQVGGHTDFMIGIKYSRYFPEEVFKMPSGLTIYISCF
KSPDGSTGVIGGPHPVFKNIKDHHFNTNKFIIDQHELFKLGYHVNPDLHL
LGYTNKNTDIFITSNSAIEEKSEFFNQSQDVGSEFQYRCIDCRGCKSCKE
LSTTDEVMSVQEEVEQHVINESINVDVCKQNSTAFLPLLHDPSLYLSPNR
KIALQIYNQQLRRLSKYSKDKEDVLNSEQKLQTLGYVDYLKNLSPDVQHT
LRNTNINNFIPWRAVWKENSVSTPCRIVFDA Run BLAST on NCBI transcript from alignment at sc0000354:303392..304386 Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00020362 ID=TCONS_00020362|Name=TCONS_00020362|organism=Clytia hemisphaerica|type=transcript|length=995bp|location=Sequence derived from alignment at sc0000354:303392..304386 (Clytia hemisphaerica)
AGCAAGCACGGCACCTACAAAATTGATCTTCCACTCATTGATGGAACAGA
TGCAACTCTCGTTGGACCATGCTTGGACCAAATCACTCAGAAGTTTCCGA
CATACAAATTGGACGGTGAAGTCATCAACGACATTCGTAAAGATTATGCC
AAATCTGGTGGTGATCCATGCAATCTTCCTCTGGTCCCAAAACAAGTTGG
TGGTCATACAGATTTTATGATCGGCATCAAATATTCAAGATACTTCCCGG
AGGAGGTATTCAAGATGCCATCAGGACTGACAATTTACATATCATGCTTC
AAAAGTCCAGACGGATCAACCGGCGTTATTGGTGGTCCACACCCTGTCTT
CAAGAACATCAAAGATCACCATTTCAACaccaataaattcatcattgatc
aACACGAGCTGTTTAAGTTGGGATATCATGTCAATCCTGACCTTCACCTG
CTCGGATACACCAACAAGAATACGGACATCTTCATTACATCAAACTCAGC
CATTGAAGAGAAGtctgaatttttcaaccaatcacaaGACGTTGGAAGCG
AATTCCAATACAGATGTATCGACTGTCGTGGCTGTAAATCCTGTAAGGAA
CTTTCGACAACTGACGAGGTCATGAGTGTACAAGAAGAAGTTGAACAACA
TGTTATCAATGAATCAATCAATGTTGATGTTTGCAAGCAAAATTCAACTG
CATTTTTACCACTTCTACATGACCCATCATTATATCTTTCTCCAAataga
aaaattgcactccagaTCTACAACCAACAACTGAGACGGTTATCAAAGTA
CTCCAAAGACAAGGAAGATGTCCTCAACTCAGAGCAAAAACTTCAAACTC
TTGGCTACGTGGATTATTTAAAGAACCTCAGCCCAGATGTACAACATACA
CTTCGAAACACCAATATCAACAACTTTATTCCATGGCGCGCAGTATGGAA
GGAGAACTCAGTGTCAACTCCGTGCCGTATTGTGTTCGACGCTTC Coding sequence (CDS) from alignment at sc0000354:303392..304386 >TCONS_00020362 ID=TCONS_00020362|Name=TCONS_00020362|organism=Clytia hemisphaerica|type=CDS|length=993bp|location=Sequence derived from alignment at sc0000354:303392..304386 (Clytia hemisphaerica)
AGCAAGCACGGCACCTACAAAATTGATCTTCCACTCATTGATGGAACAGA
TGCAACTCTCGTTGGACCATGCTTGGACCAAATCACTCAGAAGTTTCCGA
CATACAAATTGGACGGTGAAGTCATCAACGACATTCGTAAAGATTATGCC
AAATCTGGTGGTGATCCATGCAATCTTCCTCTGGTCCCAAAACAAGTTGG
TGGTCATACAGATTTTATGATCGGCATCAAATATTCAAGATACTTCCCGG
AGGAGGTATTCAAGATGCCATCAGGACTGACAATTTACATATCATGCTTC
AAAAGTCCAGACGGATCAACCGGCGTTATTGGTGGTCCACACCCTGTCTT
CAAGAACATCAAAGATCACCATTTCAACaccaataaattcatcattgatc
aACACGAGCTGTTTAAGTTGGGATATCATGTCAATCCTGACCTTCACCTG
CTCGGATACACCAACAAGAATACGGACATCTTCATTACATCAAACTCAGC
CATTGAAGAGAAGtctgaatttttcaaccaatcacaaGACGTTGGAAGCG
AATTCCAATACAGATGTATCGACTGTCGTGGCTGTAAATCCTGTAAGGAA
CTTTCGACAACTGACGAGGTCATGAGTGTACAAGAAGAAGTTGAACAACA
TGTTATCAATGAATCAATCAATGTTGATGTTTGCAAGCAAAATTCAACTG
CATTTTTACCACTTCTACATGACCCATCATTATATCTTTCTCCAAataga
aaaattgcactccagaTCTACAACCAACAACTGAGACGGTTATCAAAGTA
CTCCAAAGACAAGGAAGATGTCCTCAACTCAGAGCAAAAACTTCAAACTC
TTGGCTACGTGGATTATTTAAAGAACCTCAGCCCAGATGTACAACATACA
CTTCGAAACACCAATATCAACAACTTTATTCCATGGCGCGCAGTATGGAA
GGAGAACTCAGTGTCAACTCCGTGCCGTATTGTGTTCGACGCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00020362-exon-sc0000354-1491911889:303392..304386 | TCONS_00020362-exon-sc0000354-1491911889:303392..304386 | Clytia hemisphaerica | exon |
| TCONS_00020362-exon-sc0000354-1510915933:303392..304386 | TCONS_00020362-exon-sc0000354-1510915933:303392..304386 | Clytia hemisphaerica | exon |
| TCONS_00020362-exon-sc0000354-1575043694:303392..304386 | TCONS_00020362-exon-sc0000354-1575043694:303392..304386 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000354 | supercontig | sc0000354:303392..304386 . |
Blast
The following BLAST results are available for this feature:
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