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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00020360 ID=TCONS_00020360|Name=TCONS_00020360|organism=Clytia hemisphaerica|type=transcript|length=910bp
aaacaaaatcatGCTGAGGAgattgaaaaattgactttggatcacaaaat
caaaatattggaACTCCAAAATGACTTCAAGTTAAAAGAAATGGAGATTG
AAagcaaacaaaaacagaaaacacTCGATTTAGAGAAAGAAATTCAATCT
CTTAAAAACGAGATTGAGATTATGAAAATGAGAGCTCAACATCAACGAAC
CAATGCTGATTACaaattaaaagaagaaaaccaAACCTTGAAAAACCAGA
TTGCATTGATGCAACTCAAATCTGAGCATGCGCAAATTCAGGCTGATAGC
AATTTACGAGAAGAGAATCAAACTCTGAAGAATCAAATGGAAATTGCCAA
AGTGGAGAGCGAAAAAGAGAAAGCAGCtatcaaagatcaaatgaatgAGG
AGattcaaatattgaaaatcttcaaataaaTGTTTTGAATCTAAATAAAG
TATCTGGGAATGTGGGAATCGTTGCTCGAATTTTCACGACTGTTGAAAGG
TTTTTGGTGAATTACAATACAGGGAGAGGAGATTTTATCGGTGAAAATTA
CAAATTGTGGTATGAAGATATGTCACGTTCGATGGAAAATCGTAAGCAGT
ATGCCAATGAGAAATTCGTCTTGATTcgtaaagaaacaaaaataactGGT
GATACAAATCTGTGGTTTGCATCGTAACCAAAAGGTATTGGATATCGTGA
AGTAGATAATTATTTGATAACTGAAGGGTTGTATGAAAAAACACCTGCTG
ATGCAAACGTTTTTCTTCTCCATCCAAGCGATTATAGAAAGTTCTTGAAG
ATGAAATTCTATAATACTAGCACTGATATCAGATGGTGGTGGTCTTACGC
GACAAAAGATTTCAGTTTTGGAGATGCTTCTTCAGTTATTATGCTTGCTG
AATTTAAATG Run BLAST on NCBI protein sequence of TCONS_00020360-protein >TCONS_00020360-protein ID=TCONS_00020360-protein|Name=TCONS_00020360-protein|organism=Clytia hemisphaerica|type=polypeptide|length=142bp
KQNHAEEIEKLTLDHKIKILELQNDFKLKEMEIESKQKQKTLDLEKEIQS
LKNEIEIMKMRAQHQRTNADYKLKEENQTLKNQIALMQLKSEHAQIQADS
NLREENQTLKNQMEIAKVESEKEKAAIKDQMNEEIQILKIFK Run BLAST on NCBI transcript from alignment at sc0000354:290347..291256 Legend: exonthree_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00020360 ID=TCONS_00020360|Name=TCONS_00020360|organism=Clytia hemisphaerica|type=transcript|length=910bp|location=Sequence derived from alignment at sc0000354:290347..291256 (Clytia hemisphaerica)
CATTTAAATTCAGCAAGCATAATAACTGAAGAAGCATCTCCAAAACTGAA
ATCTTTTGTCGCGTAAGACCACCACCATCTGATATCAGTGCTAGTATTAT
AGAATTTCATCTTCAAGAACTTTCTATAATCGCTTGGATGGAGAAGAAAA
ACGTTTGCATCAGCAGGTGTTTTTTCATACAACCCTTCAGTTATCAAATA
ATTATCTACTTCACGATATCCAATACCTTTTGGTTACGATGCAAACCACA
GATTTGTATCACCagttatttttgtttctttacgAATCAAGACGAATTTC
TCATTGGCATACTGCTTACGATTTTCCATCGAACGTGACATATCTTCATA
CCACAATTTGTAATTTTCACCGATAAAATCTCCTCTCCCTGTATTGTAAT
TCACCAAAAACCTTTCAACAGTCGTGAAAATTCGAGCAACGATTCCCACA
TTCCCAGATACTTTATTTAGATTCAAAACAtttatttgaagattttcaat
atttgaatCTCCTcattcatttgatctttgataGCTGCTTTCTCTTTTTC
GCTCTCCACTTTGGCAATTTCCATTTGATTCTTCAGAGTTTGATTCTCTT
CTCGTAAATTGCTATCAGCCTGAATTTGCGCATGCTCAGATTTGAGTTGC
ATCAATGCAATCTGGTTTTTCAAGGTTtggttttcttcttttaatttGTA
ATCAGCATTGGTTCGTTGATGTTGAGCTCTCATTTTCATAATCTCAATCT
CGTTTTTAAGAGATTGAATTTCTTTCTCTAAATCGAgtgttttctgtttt
tgtttgctTTCAATCTCCATTTCTTTTAACTTGAAGTCATTTTGGAGTtc
caatattttgattttgtgatccaaagtcaatttttcaatcTCCTCAGCat
gattttgttt Coding sequence (CDS) from alignment at sc0000354:290347..291256 >TCONS_00020360 ID=TCONS_00020360|Name=TCONS_00020360|organism=Clytia hemisphaerica|type=CDS|length=429bp|location=Sequence derived from alignment at sc0000354:290347..291256 (Clytia hemisphaerica)
ttatttgaagattttcaatatttgaatCTCCTcattcatttgatctttga
taGCTGCTTTCTCTTTTTCGCTCTCCACTTTGGCAATTTCCATTTGATTC
TTCAGAGTTTGATTCTCTTCTCGTAAATTGCTATCAGCCTGAATTTGCGC
ATGCTCAGATTTGAGTTGCATCAATGCAATCTGGTTTTTCAAGGTTtggt
tttcttcttttaatttGTAATCAGCATTGGTTCGTTGATGTTGAGCTCTC
ATTTTCATAATCTCAATCTCGTTTTTAAGAGATTGAATTTCTTTCTCTAA
ATCGAgtgttttctgtttttgtttgctTTCAATCTCCATTTCTTTTAACT
TGAAGTCATTTTGGAGTtccaatattttgattttgtgatccaaagtcaat
ttttcaatcTCCTCAGCatgattttgttt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00020360-exon-sc0000354-1491911889:290347..291256 | TCONS_00020360-exon-sc0000354-1491911889:290347..291256 | Clytia hemisphaerica | exon |
| TCONS_00020360-exon-sc0000354-1510915933:290347..291256 | TCONS_00020360-exon-sc0000354-1510915933:290347..291256 | Clytia hemisphaerica | exon |
| TCONS_00020360-exon-sc0000354-1575043694:290347..291256 | TCONS_00020360-exon-sc0000354-1575043694:290347..291256 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000354 | supercontig | sc0000354:290347..291256 . |
Blast
The following BLAST results are available for this feature:
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