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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00020355 ID=TCONS_00020355|Name=TCONS_00020355|organism=Clytia hemisphaerica|type=transcript|length=499bp
TGGCTATTTGGTTCCCAATTCTCTGGGAATGCAATTTGCATATGGTATAT
GGACGAATGGTACCTTTCTTCCTGGCACACTGACTTTCTTTTACACCAGT
ATCAACATACTTGTTTTCAACGGTTTATCCATTATTTCCATCGGACAAAT
TCTCCACACTAAGAAGAATCTATTCACGTGGAAACGAAATAAACGGGTTA
TCGTATTATCTTTGCTTCTCatctattatttttataagactTTCATGATG
TATTGGATTGCTTATGGATGGTTGGCAGCTTTTACAAATGTTTCTGGTTT
TTATACTGTACCTTTTTATATACATCTTCTTCAAAAAGCAACAAACTATA
ACTAGAGGCCGTGCTTTTCAAAATACCTTATCGGTCCTTATTatgcgaga
ccaatttaatttgttgttctacgggagCGAccaatttaagggctctgacc
atagtccaaaaatttattttggtatttgaacataaaagttatatttcag Run BLAST on NCBI transcript from alignment at sc0000354:316897..318533- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00020355 ID=TCONS_00020355|Name=TCONS_00020355|organism=Clytia hemisphaerica|type=transcript|length=1637bp|location=Sequence derived from alignment at sc0000354:316897..318533- (Clytia hemisphaerica)
TGGCTATTTGGTTCCCAATTCTCTGGGAATGCAATTTGCATATGGTATAT
GGACGAATGGTACCTTTCTTCCTGGCACACTGACTTTCTTTTACACCAGT
ATCAACGTAAGTGATTACACTTTTTTATAAGAAGAATGATAGGCTCAAAA
TTGCCAAAAAATAAGAACAAATTTAGAAGAACAGACGGCCTGGAATTACT
AAATTTCAAGCAATTGATGGTGTAAAGTAGTAAAAAATGGGTTATAAACC
CTAAATAACTCTATCTCCCTAAAATAAGAACAGGATAAGAACAATTTGAC
ACTAAAAGTGCCAAAAAAGTAAGAACAGCTGAGCCTCATAAAAAATTTAC
TGGTTATAAAAATAATTGTATGCAATCTTTATATTTCCAATATGTTTCAC
ATATCCTAGTAGCATTACCTCGGTACTCTAGTTTCTCTTTCAAACCAATT
TATATTTGGAGAGATATCAACTTTCAACAACAGCATCAACATCAAATTTT
GCGAGGCTGACAAATCGTGTTATTTACGAAAAGTTTTTAAACGATAATAG
ACCTTTTCATAAATTACGTCACGATCATCACTTGCCTCGTATTCAAACAA
TTACCATATGTTCCTTGAGATATTAAATTATTTTTTTATGAATAGAAAAG
AGTTAAAAAAAATCCGTTGGAAGTTAATCACCATGGCGATAATTTCAAAA
CGAGGCCGTTTTTTTCTTTTATAAGCAATTTTATAAGAACGCGGGGCTGA
AAATCGAACAAAACTCAAGAACAATCCTAAGTCTCAGATTTCAGAAATCA
TTACGAAAGTACTGATTTTACCTTAAACCCGTTCTAAGTTTTTAAGTAAA
GAAACTTAAGTAAGGCAACCCCACGTGACCTGTAATTTTTGGGCATTTGG
CTAATTTTTTTCGATTGCGATAATTAGTTCCCGTTAAAGTTAGTTTCTTT
AAGGTACTTACCGTAAGTTGTTCCAATGTCTAAATCCCTCTTCTAATTTC
GATACCGTTTTTTAAAGCTGACAATAAAAAAAAGGTCTGGATCACTGATA
GACAAAAGATTTTTTCATCCCTGATTGCTGAGCAAAAAAGATTAGCGATT
TCGACCTTCATATTATTCCTATCCCTAAAGAAGGATGTCCGAATTAGAAG
AGGAATGTCGACATTAGACCAACTTAAGGTGCTCAAGTCACAAATCGTAT
CAAGACTTTAATCTCCCAAATTTCTTCATTTCTTTTCATTCTAGATACTT
GTTTTCAACGGTTTATCCATTATTTCCATCGGACAAATTCTCCACACTAA
GAAGAATCTATTCACGTGGAAACGAAATAAACGGGTTATCGTATTATCTT
TGCTTCTCATCTATTATTTTTATAAGACTTTCATGATGTATTGGATTGCT
TATGGATGGTTGGCAGCTTTTACAAATGTTTCTGGTTTTTATACTGTACC
TTTTTATATACATCTTCTTCAAAAAGCAACAAACTATAACTAGAGGCCGT
GCTTTTCAAAATACCTTATCGGTCCTTATTATGCGAGACCAATTTAATTT
GTTGTTCTACGGGAGCGACCAATTTAAGGGCTCTGACCATAGTCCAAAAA
TTTATTTTGGTATTTGAACATAAAAGTTATATTTCAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00020355-exon-sc0000354-1575043694:318428..318533 | TCONS_00020355-exon-sc0000354-1575043694:318428..318533 | Clytia hemisphaerica | exon |
| TCONS_00020355-exon-sc0000354-1575043694:316897..317289 | TCONS_00020355-exon-sc0000354-1575043694:316897..317289 | Clytia hemisphaerica | exon |
| TCONS_00020355-exon-sc0000354-1510915933:318428..318533 | TCONS_00020355-exon-sc0000354-1510915933:318428..318533 | Clytia hemisphaerica | exon |
| TCONS_00020355-exon-sc0000354-1510915933:316897..317289 | TCONS_00020355-exon-sc0000354-1510915933:316897..317289 | Clytia hemisphaerica | exon |
| TCONS_00020355-exon-sc0000354-1491911889:318428..318533 | TCONS_00020355-exon-sc0000354-1491911889:318428..318533 | Clytia hemisphaerica | exon |
| TCONS_00020355-exon-sc0000354-1491911889:316897..317289 | TCONS_00020355-exon-sc0000354-1491911889:316897..317289 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000354 | supercontig | sc0000354:316897..318533 - |
Blast
The following BLAST results are available for this feature:
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