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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00020354 ID=TCONS_00020354|Name=TCONS_00020354|organism=Clytia hemisphaerica|type=transcript|length=905bp
AGGGTATCTATAggatatttaatatttttccgctgataattttcttcaaa
tttataggatttctttttttttatcgtGGTATTGTCTATTATCTTTCAAT
AAAATCTATTAttataaaaattagaaaacgactAGTGAAGTTGACACAAC
TCAAAGTTCTGTTATTCGATAATTTAAAGttaccgtcaacaagaaactct
tgaGGTcgaattttcaaagaaagtatCAGCCTCTGACGACCAAGTAAATA
agttttatcgcgcatgtgtcaatctaatcactgtataaagaatcaaagat
gaagagcaaataatATTACCATGTTATGTCTAGCAGAAGGTATCAGTATG
CATGTTTTACTATTGACAAATTCCCACGAAACCTCTAAGTGTAAGAAAAT
CTCGAATTTGTTATCCTTTTCTGAATATTTACAAGGTAATGCtgaaaaaa
gtgcattttcagAGTTAATCTGTCAGTCGAGTTGATCCTAAGACCTCGTA
AACAATCCCGAGATTTGCATGCATCTTGAATCATTTCTAATATTCCAATT
AatttatttatcatttaaatTTTCCTTGTTACCATGTTCTTCCCCGACTA
AAACTTTTACTATCTTTACCGTCTTTGTTTTGGGTTCAGTTACAGGGTCC
TTGGAATCAAGAGGTCCAGTTACAGGGTCTTTAGCAATATCGATTGAAcc
tttttcaggatttttctcTTCACTTTTTAGTCTTTTATTTTGATCTTCAA
CAATTATTGTCGATGATAATTCGGTCTGCAAAATAGATCCATCGATATTC
GAGATATTGTAATCAGGAAGTATCGCTTTTAGAGAGGTTGCGACATCATG
GGCGGAAGGGCGCCGGGTGTAATCTTCGATGGTGCAGCAAATAAACGTTC
ctata Run BLAST on NCBI transcript from alignment at sc0000354:293361..294347- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00020354 ID=TCONS_00020354|Name=TCONS_00020354|organism=Clytia hemisphaerica|type=transcript|length=987bp|location=Sequence derived from alignment at sc0000354:293361..294347- (Clytia hemisphaerica)
AGGGTATCTATAGGATATTTAATATTTTTCCGCTGATAATTTTCTTCAAA
TTTATAGGATTTCTTTTTTTTTATCGTGGTATTGTCTATTATCTTTCAAT
AAAATCTATTATTATAAAAATTAGAAAACGACTAGTGAAGTTGACACAAC
TCAAAGTTCTGTTATTCGATAATTTAAAGTTACCGTCAACAAGAAACTCT
TGAGGCNGTTGGCTCTTACTCAAAGTTCTATTATTCGATAATTTAAAGTT
ACCGTCAACAAGAAACTCTTACCCTCAGTATCAGAGGTCGAATTTTCAAA
GAAAGTATCAGCCTCTGACGACCAAGTAAATAAGTTTTATCGCGCATGTG
TCAATCTAATCACTGTATAAAGAATCAAAGATGAAGAGCAAATAATATTA
CCATGTTATGTCTAGCAGAAGGTATCAGTATGCATGTTTTACTATTGACA
AATTCCCACGAAACCTCTAAGTGTAAGAAAATCTCGAATTTGTTATCCTT
TTCTGAATATTTACAAGGTAATGCTGAAAAAAGTGCATTTTCAGAGTTAA
TCTGTCAGTCGAGTTGATCCTAAGACCTCGTAAACAATCCCGAGATTTGC
ATGCATCTTGAATCATTTCTAATATTCCAATTAATTTATTTATCATTTAA
ATTTTCCTTGTTACCATGTTCTTCCCCGACTAAAACTTTTACTATCTTTA
CCGTCTTTGTTTTGGGTTCAGTTACAGGGTCCTTGGAATCAAGAGGTCCA
GTTACAGGGTCTTTAGCAATATCGATTGAACCTTTTTCAGGATTTTTCTC
TTCACTTTTTAGTCTTTTATTTTGATCTTCAACAATTATTGTCGATGATA
ATTCGGTCTGCAAAATAGATCCATCGATATTCGAGATATTGTAATCAGGA
AGTATCGCTTTTAGAGAGGTTGCGACATCATGGGCGGAAGGGCGCCGGGT
GTAATCTTCGATGGTGCAGCAAATAAACGTTCCTATA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00020354-exon-sc0000354-1575043694:294144..294347 | TCONS_00020354-exon-sc0000354-1575043694:294144..294347 | Clytia hemisphaerica | exon |
| TCONS_00020354-exon-sc0000354-1575043694:293361..294061 | TCONS_00020354-exon-sc0000354-1575043694:293361..294061 | Clytia hemisphaerica | exon |
| TCONS_00020354-exon-sc0000354-1510915933:294144..294347 | TCONS_00020354-exon-sc0000354-1510915933:294144..294347 | Clytia hemisphaerica | exon |
| TCONS_00020354-exon-sc0000354-1510915933:293361..294061 | TCONS_00020354-exon-sc0000354-1510915933:293361..294061 | Clytia hemisphaerica | exon |
| TCONS_00020354-exon-sc0000354-1491911889:294144..294347 | TCONS_00020354-exon-sc0000354-1491911889:294144..294347 | Clytia hemisphaerica | exon |
| TCONS_00020354-exon-sc0000354-1491911889:293361..294061 | TCONS_00020354-exon-sc0000354-1491911889:293361..294061 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000354 | supercontig | sc0000354:293361..294347 - |
Blast
The following BLAST results are available for this feature:
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