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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00020321 ID=TCONS_00020321|Name=TCONS_00020321|organism=Clytia hemisphaerica|type=transcript|length=1175bp
ccatagaatgaacttccttttataggatgaaaaatattcatgtggctttc
agccttgcactccatcgcatattgatgtaactgacagaTAGTGATAGTgc
aaagttagagcagttgatgacGGTAAACTATGATTTCATCATTTTACAAG
TCTCAGTTTAAAAATCTCAGAAACAAAGCTCCCATACAGCCATAGAAATT
TCCATAGGACAcaaaatctgattggttaattttggaAGGGCTTCTCGCTC
GATCGGCacctcaaaaaataaaaagatgacAGACTGACTTTTGcaagttg
aaattgaaaagaagtacCTAGAGTTTCTGACCATAACAATTTAACCagac
agaaaaaaataaaaaaagataattttgctACTTCTTTCTCCTTTTACCTT
TGCTTTTATTGATTGTAAACCTGAATCACACCACCACACCACCACACCAT
ACCTGACCTGGGACGTCCAAAAATCTTCCAATTCATTTCCTCTCTTCTTT
CTCACGTCCTTTGTTTACCTGGTACATCGAGAGAGCTTTGATTCGAGACA
TCGAGATCTGGCGGGAAATGACTTTCGCggcaaaatcaaaaatcattggT
AGCCTGTATCAAACTCGATCAAACTCTTCTATCTTAGCAAGAAAAGACTA
AAATCGCCCGCAGTGGGCCTGAAACAGGCTGAAACATTACCATCGCGCAG
CTCGCGGATTACCACCGTTTTTTatgtataagaacaaactaagtttagaa
cattttaaggctttctggACCCTGCCTAaagtacctattttcttaggaaa
atggacaaaaatatttttgataagaacCTTTCTAGGCTTATAATGGCCTa
taataaaactcaaaaagttaaaaaaatccaaaaagccttaattaaaagat
tctggatgttcttataaaaagaacacGTGTGATTGGCGCATAACAAAAAT
CTTATTGTCAATCTTGATATTCATGtcataatcttttatacggaaacacg
cGAAGAACACCGGGCGTTCGCCACCAGTTTCATTGCTCAAATTCATAACT
GGTGGCAAACACCCGGTGTTattcgggtgtttccgtataaaagattacat
catgaattaCATCAAGggaaatggaggaaaaaatcgatgaaatTACCAAG
AATTACCGCTTGAAAATGAGGTTCC Run BLAST on NCBI transcript from alignment at sc0000351:198806..199980 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00020321 ID=TCONS_00020321|Name=TCONS_00020321|organism=Clytia hemisphaerica|type=transcript|length=1175bp|location=Sequence derived from alignment at sc0000351:198806..199980 (Clytia hemisphaerica)
GGAACCTCATTTTCAAGCGGTAATTCTTGGTAatttcatcgattttttcc
tccatttccCTTGATGtaattcatgatgtaatcttttatacggaaacacc
cgaatAACACCGGGTGTTTGCCACCAGTTATGAATTTGAGCAATGAAACT
GGTGGCGAACGCCCGGTGTTCTTCgcgtgtttccgtataaaagattatga
CATGAATATCAAGATTGACAATAAGATTTTTGTTATGCGCCAATCACACg
tgttctttttataagaacatccagaatcttttaattaaggctttttggat
ttttttaactttttgagttttattatAGGCCATTATAAGCCTAGAAAGgt
tcttatcaaaaatatttttgtccattttcctaagaaaataggtacttTAG
GCAGGGTccagaaagccttaaaatgttctaaacttagtttgttcttatac
atAAAAAACGGTGGTAATCCGCGAGCTGCGCGATGGTAATGTTTCAGCCT
GTTTCAGGCCCACTGCGGGCGATTTTAGTCTTTTCTTGCTAAGATAGAAG
AGTTTGATCGAGTTTGATACAGGCTAccaatgatttttgattttgccGCG
AAAGTCATTTCCCGCCAGATCTCGATGTCTCGAATCAAAGCTCTCTCGAT
GTACCAGGTAAACAAAGGACGTGAGAAAGAAGAGAGGAAATGAATTGGAA
GATTTTTGGACGTCCCAGGTCAGGTATGGTGTGGTGGTGTGGTGGTGTGA
TTCAGGTTTACAATCAATAAAAGCAAAGGTAAAAGGAGAAAGAAGTagca
aaattatctttttttatttttttctgtctGGTTAAATTGTTATGGTCAGA
AACTCTAGgtacttcttttcaatttcaacttgCAAAAGTCAGTCTgtcat
ctttttattttttgaggtGCCGATCGAGCGAGAAGCCCTtccaaaattaa
ccaatcagattttgTGTCCTATGGAAATTTCTATGGCTGTATGGGAGCTT
TGTTTCTGAGATTTTTAAACTGAGACTTGTAAAATGATGAAATCATAGTT
TACCgtcatcaactgctctaactttgcACTATCACTAtctgtcagttaca
tcaatatgcgatggagtgcaaggctgaaagccacatgaatatttttcatc
ctataaaaggaagttcattctatgg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00020321-exon-sc0000351-1491911889:198806..199980 | TCONS_00020321-exon-sc0000351-1491911889:198806..199980 | Clytia hemisphaerica | exon |
| TCONS_00020321-exon-sc0000351-1510915933:198806..199980 | TCONS_00020321-exon-sc0000351-1510915933:198806..199980 | Clytia hemisphaerica | exon |
| TCONS_00020321-exon-sc0000351-1575043694:198806..199980 | TCONS_00020321-exon-sc0000351-1575043694:198806..199980 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000351 | supercontig | sc0000351:198806..199980 . |
Blast
The following BLAST results are available for this feature:
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