TCONS_00020254 (transcript) - C. hemisphaerica

Overview
NameTCONS_00020254
Unique NameTCONS_00020254
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2318

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00020254 ID=TCONS_00020254|Name=TCONS_00020254|organism=Clytia hemisphaerica|type=transcript|length=2318bp
CTTTTTGTCAAGTTCTGATTTGATAGATATTTTAGTCTTATGAGTTAGAG
AATGAATGGCTTAAAAATGCTTTTTACTGCCTTTTATTTCTCTAGGAAAG
GGTAAAGATACCTTTGATTTTCTCTTTAGAATTTACAAGttgaaaattaa
taataaaGCAACAAAATGTTGAAACATATTCTGATTGTGCACGGCTTCTT
ACTCAGTGGAACAGGCTCCAATATTTACAGCTGCAATGTAGCAATGCAAT
GGAAGAAACAAAACCATGCTATCACCATATTCTGCCAAGACCCTGATGCT
GGAACTTATGATTGGGTTGACGAATTATACACCAAGAATGATGAGTTGCC
CAAAGAGCAAGTAGCCCCTGGTAAAGTTCGTGTCATTTTGCCAGACATTG
CTGACCTTCTTCCTGTTTACCAATACGATGAATACAAAGGATACACCACT
AAAACAATCCCTAACTTCACTGATGAAGAGATCGAAAgACACATCAACAT
GATGGCAAAGGCTGTCAAAGACGTTTGCACACGATGGAAGGTTGATAAAG
TTTTGTCTAACCATGCTCTCTTGCAGCCTATCAACGTCAAAAGAGGGTTA
GAAGGCCTCGACATTCCATTCGACATCAAAATCCATGGCAGTGCTATCAC
CTTCATCTTAAAGAAATTTCCCAAGTATATGCCATACGCTGTCGAAGCTA
TAGAAGCTTCCAATAAAGTCATTGCTGGAACCCTACACGTCGTTGATCAA
GTGTTATCAACTTTCCCAGACATGGATCTTTCAAAGAAGTTGGTCATCGT
TCCCCCGGGTATGGACCCTGACGTTTTCGACCTTTGTACAAGCATCGACA
CAAACAGCNCCCCCGGGTATGGACCCTGACGTTTTCGACCTTTGCACAAG
CATCGACACAAACAGCAAAAAGTTCTTACAATTGTGTGAAAAACATGTTA
ACGCCGACGGAACAGGCCGTGACGCTTCAAAAGTAACCTTACCAGAGAAA
GGAGACACGACGCAAGATTTTCATAACAAATTGGTGGAAATGTCCAAAGA
TTGTAACCAACGTGTTGTCGATTCAgacattttgaagaaattccCAACCA
TTGCTGAAGATGAACCTGTCCTGATTTTCTTCGGAAAATTCCTTTACACT
AAAGGTATCggtgaaattttgatgacgtttccAACAATGGTCAAGAAATA
TCCCAAGATGCGTTTGATCTTGGTTGGTTTTGGTATTTACAGAGAACACA
TCGAGATTATGATTCACTCAATGGTGACAGGAAACAAAGAATTATTCAAA
TCAGCTGCTCACTGTGTCGATGAGCTCGGCTGCTCTTTCCTTGAATCGTC
TGTTGATATTGATCAGACATTCCAAAAACTTGATCAAGAGCAAGCTGATC
GTATCTTGGTGACAGGATGTTTAAACCACAAAGAACTTGGTTTATTGCTT
CCCATGGCATCCATTTCATTGGTCACATCTAAAGCCACCGAAGCTTTCGG
AATGGTCTCCGTCGAAGCCATGTCTGCTGgtgTACTGCCACTCTGTGTAT
ATCATTCGGGTATCAAAGATGTTTTGGACAAGCTAAAGGAGACAGAACCA
GAATTGGAAGATTTACTTCATTTACCAGTCGAAAGTGGAGGTGATTATAC
TGCAGCCAACGGTGCACATCTCATTAAGATTTTACCGGAAAGAGTATTTG
CAGCTTTGGAATACCTATACCCTTCGTCTAAATCACGTGACGATCAATTG
GCCAATAGACGTgaagttggtcaaaaattacGTAAAGTTGCTTGCGATGT
TTGGTCTTGGGATGGTATTTGTACTACCCTAGCCAATTTGTAAAATTGAA
GGAATCGTTTCAgtcctgttttgttttgtttatttttttgtggtgATTGT
GTTTTGTTAATGAATGAGTGAATGAGTGAATTATTTATGTGATGACGATT
TGTCGAATTATCTGATATttcattgattgattgattgattgattgattaa
aaGTTAAATTCTCCAATCAAATATTGAACTGATATCTCGGTTAATTTTCT
TTATACTCGAGTGCTTTGTATTTGTCTAGTATTTgtcttttgtaattttc
aagaatttatttaGGAAATTTACTAATTATATTTATTTAcgaatttttaa
aaaagataaaaaaaattatttttgataattatttttatttccgCATGCTT
TAGTTTGAATTTGTAATAGTAGTGGAAATAAACATTTAGAAGCTACAGTA
TGTTTCATAGAATtactgaaaaaaattcattttttattactgTATATACT
GTCGTCCGTCCATTTTCA
Run BLAST on NCBI

protein sequence of TCONS_00020254-protein

>TCONS_00020254-protein ID=TCONS_00020254-protein|Name=TCONS_00020254-protein|organism=Clytia hemisphaerica|type=polypeptide|length=324bp
MDPDVFDLCTSIDTNSKKFLQLCEKHVNADGTGRDASKVTLPEKGDTTQD
FHNKLVEMSKDCNQRVVDSDILKKFPTIAEDEPVLIFFGKFLYTKGIGEI
LMTFPTMVKKYPKMRLILVGFGIYREHIEIMIHSMVTGNKELFKSAAHCV
DELGCSFLESSVDIDQTFQKLDQEQADRILVTGCLNHKELGLLLPMASIS
LVTSKATEAFGMVSVEAMSAGVLPLCVYHSGIKDVLDKLKETEPELEDLL
HLPVESGGDYTAANGAHLIKILPERVFAALEYLYPSSKSRDDQLANRREV
GQKLRKVACDVWSWDGICTTLANL
Run BLAST on NCBI

transcript from alignment at sc0000350:452243..457531-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00020254 ID=TCONS_00020254|Name=TCONS_00020254|organism=Clytia hemisphaerica|type=transcript|length=5289bp|location=Sequence derived from alignment at sc0000350:452243..457531- (Clytia hemisphaerica)
CTTTTTGTCAAGTTCTGATTTGATAGATATTTTAGTCTTATGAGTTAGAG
AATGAATGGCTTAAAAATGCTTTTTACTGCCTTTTATTTCTCTAGGAAAG
GGTAAAGATACCTTTGATTTTCTCTTTAGAATTTACAAGTTGAAAATTAA
TAATAAAGCAACAAAATGTTGAAACATATTCTGATTGTGCACGGCTTCTT
ACTCAGTGGAACAGGCTCCAATATTTACAGCTGCAATGTAGCAATGCAAT
GGAAGAAACAAAACCATGCTATCACCATATTCTGCCAAGACCCTGATGCT
GGAACTTATGATTGGGTTGACGAATTATACACCAAGAATGATGAGTTGCC
CAAAGAGCAAGTAGCCCCTGGTAAAGTTCGTGTCATTTTGCCAGACATTG
CTGACCTTCTTCCTGTTTACCAATACGATGAATACAAAGGATACACCACT
AAAACAATCCCTAACTTCACTGATGAAGAGATCGAAAGGTACTTTAAGGG
CAGAAACTTTCGCGGACAGAAAGTTTCGCGAGACCGAAAAGTCGCGAAAT
TTCGCGGATTTAAGTTTCGCGATTTTTACTTTTGGAAGAAAATTTACGGA
AGAAACTTTCGCGGTTTTTTGTGAATGTTCAATTTTAGTAGCAATAACTT
TTGCGAGTAGCTAGGGAAAGTGAATAAAAAATTATTTCAAATCTCATTTT
TTTCTCCAATCGAAAGAGTGATATGCTAATAAATGAAAAATAAACTATTT
GCACATCTTCCTCCCATTCCGAATCTTAGTCACTGCGATAATATCGATAA
TATCGACTCTCCTAGGCTTTTAAAACTTGGAAAAAACTTTTGCAATTTTT
AAGAAAATTTCATTTTTCGCGAAATTAACTTTTGCGAATTTCTTGTTTAA
TTTCTTACCTGGCAGAAACTTTCGCGAAAAAATGCTAAAAACGCGAAAGT
TTCTGCCCTTAAAGTATTTTTGATTTATGATATTCGTTGCGTAAATATTT
TTAAAGAAGCAGTTCTAAGTTGCTTCACTTTTACCTAATTTATTTAAATT
GACACACAGGTGCATGCATTTATTAGGACACTTGCTTAAATTACTTTATA
CTCTTGACTCGATCATTTACGTACTAATTATTTTTTCGCGTAACTCCTCT
AGCAAACTATTAGTTGAATGACTCGCAAAATACTCACTAACACACATGTA
AACATAACTATTCTCGTTTACGCAGACACATCAACATGATGGCAAAGGCT
GTCAAAGACGTTTGCACACGATGGAAGGTTGATAAAGTTTTGTCTAACCA
TGCTCTCTTGCAGCCTATCAACGTCAAAAGAGGGTTAGAAGGCCTCGACA
TTCCATTCGACATCAAAATCCATGGCAGTGCTATCACCTTCATCTTAAAG
AAATTTCCCAAGTATATGCCATACGCTGTCGAAGCTATAGAAGCTTCCAA
TAAAGTCATTGCTGGAACCCTACACGTCGTTGATCAAGTAGGTTTTCAAT
AGCTCTTAATTCAATTGTATTTTGCTGCCTTTTGGATTTGTTTTTCTGGT
TTGAGTCCCGAATCAATTTTTCTTGGCGTATTCTCTAGTTAAATCTTCAG
TTTCATAATTTGCAATACGTTGAGTAATAACATGTAAAAAGGGACCATTC
TTAACTCGACAAATCTATTCATAGTGTGAACCCCCCCCCTTTTTTTTNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNAGGCCCCCCCCCCCCCAACTTTTCCAAAAATGCTTTATAGGGG
GGGGGATAGGAGATTTTCCGAAAAAAATTGGGGGCTTAAGATTTTAGGAG
GGTCAAGTAAAAATAGGGGGGATAACAACTTTTCGTCAAAATATCTATCC
TATTTATATTGATTTAGACATTTGGTGTGGGACAACTAAAAAACAAGTGT
AGATAGCTAATTTTTTGCCTGCCGCGCCATGTTAAACTCTTTTTTCATAT
AATTTTTTATACAAATCTCAATGTTTTTGGTTTTGAATGACTGGTGGACT
GCTGCTGTCAATAGCACGGGTTCGAATTTTTTTTTAAATAGAAGGGTATA
CATATAGGGGGTGCAATAAAAATGGGGGGGGGGTTAGACCCCTCTGCACA
CTATGTTATTATTTCCGCCGTTGCAATTAATATATATTTATTTGAAACAG
CTAAAGTGGTTGTATGTGAAATAATTCTTCTAATTCGTTTTAGGTGTTAT
CAACTTTCCCAGACATGGATCTTTCAAAGAAGTTGGTCATCGTTCCCCCG
GGTATGGACCCTGACGTTTTCGACCTTTGTACAAGCATCGACACAAACAG
CNCCCCCGGGTATGGACCCTGACGTTTTCGACCTTTGCACAAGCATCGAC
ACAAACAGCAAAAAGTTCTTACAATTGTGTGAAAAACATGTTAACGCCGA
CGGAACAGGCCGTGACGCTTCAAAAGTAACCTTACCAGAGAAAGGAGACA
CGACGCAAGATTTTCATAACAAATTGGTGGAAATGTCCAAAGATTGTAAC
CAACGTGTTGTCGATTCAGACATTTTGAAGAAATTCCCAACCATTGCTGA
AGATGAACCTGTCCTGATTTTCTTCGGAAAATTCCTTTACACTAAAGGTA
CTTTTTTGTTTATTCATCATATTGGTACTTCAGTTTTTTATAACATTTCC
CATAGCTTATAATTTAAAAAACTTTTTGTCGTGTGTTTTCTTACAAAATT
AAAAGAATGATTTTCACTATAACCGTATTTCTCACAAAATCCTAAATTTA
CTACATTGGTAACGCCAAACTTACGGCCTGAATCTGTAGTCCAATCTTTC
TACTTCTTAGATTGATATCATTTTTAAAAACCTTTTATTCCAGGTATCGG
TGAAATTTTGATGACGTTTCCAACAATGGTCAANTTTTTGAAAACCTTTT
ATTCCAGGTATCGGTGAAATTTTGATGACGTTTCCAACAATGGTCAAGAA
ATATCCCAAGATGCGTTTGATCTTGGTTGGTTTTGGTATTTACAGAGAAC
ACATCGAGATTATGATTCACTCAATGGTGACAGGAAACAAAGAATTATTC
AAATCAGCTGCTCACTGTGTCGATGAGCTCGGCTGCTCTTTCCTTGAATC
GTCTGTTGATATTGATCAGACATTCCAAAAACTTGGTAAGGAGTCCTGTT
TTTTTGAAATTGAAACGAAGCTTGTTCATTCTAATGATCGTGGATTATAT
GATATGACCACTTACTTTACAAGTGATATAACACTTTTCAATAATTGGCT
AAATACCTTCAGCGTAGTAAATTTGAGTTCAAAAAGAAATAACCTTCAAA
GTGAAACTACTGGTAAAACAGGGTTTGTAGATTACCCTGTCGCAACATAT
CAACGGCTTTCATTCATTATGATGAAGTTAACCATATATTTGAACTGTCT
ATATGGGGACTAACAGGTTAATGGACGGAGCTCCAAAGTCATTAGTGTTC
TTCTTAGCCAGTCAAAAACTACAAAAAATTTGAAAACCACCCTTTTTCCT
GATAATCTCTTGTTTCTTTGTTTCCACATATAGATCAAGAGCAAGCTGAT
CGTATCTTGGTGACAGGATGTTTAAACCACAAAGAACTTGGTTTATTGCT
TCCCATGGCATCCATTTCATTGGTCACATCTAAAGCCACCGAAGCTTTCG
GAATGGTCTCCGTCGAAGCCATGTCTGCTGGTAAGTGCGGTATTCAAGGG
CCAAAATAATTATTTATTTGAACAAGTAACATTATAGAAAGGAAGCTTGC
CAATGCGAATGATTCCTTTATAGATTTCTGTAGAGAAAGGTAGAGAAAAG
TAAACCAGGACCGAGGCTATTGTTCTTTTAGAGAGTTCAATCATAGTGTC
TCAATCTATCGCTAATCGCATTTTCAAATCCGACCTTTTTATGTGTCACT
TCGTTTATAAAGTCTTCAAAAAAATACAGCGCGGCCACTTCTCTCTCCTT
TCCTGAGTAATGTAGACGGTAGGAAAAATCTAAACTCACCACGATTTTCT
TTTTTTCAGGTGTACTGCCACTCTGTGTATATCATTCGGGTATCAAAGAT
GTTTTGGACAAGCTAAAGGAGACAGAACCAGAATTGGAAGATTTACTTCA
TTTACCAGTCGAAAGTGGAGGTGATTATACTGCAGCCAACGGTGCACATC
TCATTAAGGTAAGATCTATCCAATTTTTAAGTATGTTTCTTCAAAAATCA
ATACCATCAGATGCCTAATGAATAATGACGGGTTAAAAATGTTCTACTAA
ATAGTCCAAATGAAGGCATAATTAGGTTACTTCGAACAAAATAAGGAATA
TTTCTTTGAAAGTTGAAAATTTATTTGAAAATGGGGGAAGAGGCTCTCTA
ATAAGGTTTGGGTTGGAAAAATAGAAGATTTAATTAATGATAACGGAGGC
TTAATCAGGCACCTGAGAGCAGGAGAGAAAGAAAGACAAATGATTCTGTT
CAATTTAATTGTGTAGCTAATTATCTGTGCAATGTTGAAGATAGTATGAT
GATCAAAACCCTCTTAACTCACTTTACTAACTCAACTATTACAATCTAGA
TTTTACCGGAAAGAGTATTTGCAGCTTTGGAATACCTATACCCTTCGTCT
AAATCACGTGACGATCAATTGGCCAATAGACGTGAAGTTGGTCAAAAATT
ACGTAAAGTTGCTTGCGATGTTTGGTCTTGGGATGGTATTTGTACTACCC
TAGCCAATTTGTAAAATTGAAGGAATCGTTTCAGTCCTGTTTTGTTTTGT
TTATTTTTTTGTGGTGATTGTGTTTTGTTAATGAATGAGTGAATGAGTGA
ATTATTTATGTGATGACGATTTGTCGAATTATCTGATATTTCATTGATTG
ATTGATTGATTGATTGATTAAAAGTTAAATTCTCCAATCAAATATTGAAC
TGATATCTCGGTTAATTTTCTTTATACTCGAGTGCTTTGTATTTGTCTAG
TATTTGTCTTTTGTAATTTTCAAGAATTTATTTAGGAAATTTACTAATTA
TATTTATTTACGAATTTTTAAAAAAGATAAAAAAAATTATTTTTGATAAT
TATTTTTATTTCCGCATGCTTTAGTTTGAATTTGTAATAGTAGTGGAAAT
AAACATTTAGAAGCTACAGTATGTTTCATAGAATTACTGAAAAAAATTCA
TTTTTTATTACTGTATATACTGTCGTCCGTCCATTTTCA

Coding sequence (CDS) from alignment at sc0000350:452243..457531-

>TCONS_00020254 ID=TCONS_00020254|Name=TCONS_00020254|organism=Clytia hemisphaerica|type=CDS|length=4875bp|location=Sequence derived from alignment at sc0000350:452243..457531- (Clytia hemisphaerica)
ATTTTACCGGAAAGAGTATTTGCAGCTTTGGAATACCTATACCCTTCGTC
TAAATCACGTGACGATCAATTGGCCAATAGACGTGAAGTTGGTCAAAAAT
TACGTAAAGTTGCTTGCGATGTTTGGTCTTGGGATGGTATTTGTACTACC
CTAGCCAATTTGTAAGTGTACTGCCACTCTGTGTATATCATTCGGGTATC
AAAGATGTTTTGGACAAGCTAAAGGAGACAGAACCAGAATTGGAAGATTT
ACTTCATTTACCAGTCGAAAGTGGAGGTGATTATACTGCAGCCAACGGTG
CACATCTCATTAAGATCAAGAGCAAGCTGATCGTATCTTGGTGACAGGAT
GTTTAAACCACAAAGAACTTGGTTTATTGCTTCCCATGGCATCCATTTCA
TTGGTCACATCTAAAGCCACCGAAGCTTTCGGAATGGTCTCCGTCGAAGC
CATGTCTGCTGGTATCGGTGAAATTTTGATGACGTTTCCAACAATGGTCA
AGAAATATCCCAAGATGCGTTTGATCTTGGTTGGTTTTGGTATTTACAGA
GAACACATCGAGATTATGATTCACTCAATGGTGACAGGAAACAAAGAATT
ATTCAAATCAGCTGCTCACTGTGTCGATGAGCTCGGCTGCTCTTTCCTTG
AATCGTCTGTTGATATTGATCAGACATTCCAAAAACTTGATGGACCCTGA
CGTTTTCGACCTTTGCACAAGCATCGACACAAACAGCAAAAAGTTCTTAC
AATTGTGTGAAAAACATGTTAACGCCGACGGAACAGGCCGTGACGCTTCA
AAAGTAACCTTACCAGAGAAAGGAGACACGACGCAAGATTTTCATAACAA
ATTGGTGGAAATGTCCAAAGATTGTAACCAACGTGTTGTCGATTCAGACA
TTTTGAAGAAATTCCCAACCATTGCTGAAGATGAACCTGTCCTGATTTTC
TTCGGAAAATTCCTTTACACTAAAGATTTTACCGGAAAGAGTATTTGCAG
CTTTGGAATACCTATACCCTTCGTCTAAATCACGTGACGATCAATTGGCC
AATAGACGTGAAGTTGGTCAAAAATTACGTAAAGTTGCTTGCGATGTTTG
GTCTTGGGATGGTATTTGTACTACCCTAGCCAATTTGTAAGTGTACTGCC
ACTCTGTGTATATCATTCGGGTATCAAAGATGTTTTGGACAAGCTAAAGG
AGACAGAACCAGAATTGGAAGATTTACTTCATTTACCAGTCGAAAGTGGA
GGTGATTATACTGCAGCCAACGGTGCACATCTCATTAAGATCAAGAGCAA
GCTGATCGTATCTTGGTGACAGGATGTTTAAACCACAAAGAACTTGGTTT
ATTGCTTCCCATGGCATCCATTTCATTGGTCACATCTAAAGCCACCGAAG
CTTTCGGAATGGTCTCCGTCGAAGCCATGTCTGCTGGTATCGGTGAAATT
TTGATGACGTTTCCAACAATGGTCAAGAAATATCCCAAGATGCGTTTGAT
CTTGGTTGGTTTTGGTATTTACAGAGAACACATCGAGATTATGATTCACT
CAATGGTGACAGGAAACAAAGAATTATTCAAATCAGCTGCTCACTGTGTC
GATGAGCTCGGCTGCTCTTTCCTTGAATCGTCTGTTGATATTGATCAGAC
ATTCCAAAAACTTGATGGACCCTGACGTTTTCGACCTTTGCACAAGCATC
GACACAAACAGCAAAAAGTTCTTACAATTGTGTGAAAAACATGTTAACGC
CGACGGAACAGGCCGTGACGCTTCAAAAGTAACCTTACCAGAGAAAGGAG
ACACGACGCAAGATTTTCATAACAAATTGGTGGAAATGTCCAAAGATTGT
AACCAACGTGTTGTCGATTCAGACATTTTGAAGAAATTCCCAACCATTGC
TGAAGATGAACCTGTCCTGATTTTCTTCGGAAAATTCCTTTACACTAAAG
ATTTTACCGGAAAGAGTATTTGCAGCTTTGGAATACCTATACCCTTCGTC
TAAATCACGTGACGATCAATTGGCCAATAGACGTGAAGTTGGTCAAAAAT
TACGTAAAGTTGCTTGCGATGTTTGGTCTTGGGATGGTATTTGTACTACC
CTAGCCAATTTGTAAGTGTACTGCCACTCTGTGTATATCATTCGGGTATC
AAAGATGTTTTGGACAAGCTAAAGGAGACAGAACCAGAATTGGAAGATTT
ACTTCATTTACCAGTCGAAAGTGGAGGTGATTATACTGCAGCCAACGGTG
CACATCTCATTAAGATCAAGAGCAAGCTGATCGTATCTTGGTGACAGGAT
GTTTAAACCACAAAGAACTTGGTTTATTGCTTCCCATGGCATCCATTTCA
TTGGTCACATCTAAAGCCACCGAAGCTTTCGGAATGGTCTCCGTCGAAGC
CATGTCTGCTGGTATCGGTGAAATTTTGATGACGTTTCCAACAATGGTCA
AGAAATATCCCAAGATGCGTTTGATCTTGGTTGGTTTTGGTATTTACAGA
GAACACATCGAGATTATGATTCACTCAATGGTGACAGGAAACAAAGAATT
ATTCAAATCAGCTGCTCACTGTGTCGATGAGCTCGGCTGCTCTTTCCTTG
AATCGTCTGTTGATATTGATCAGACATTCCAAAAACTTGATGGACCCTGA
CGTTTTCGACCTTTGCACAAGCATCGACACAAACAGCAAAAAGTTCTTAC
AATTGTGTGAAAAACATGTTAACGCCGACGGAACAGGCCGTGACGCTTCA
AAAGTAACCTTACCAGAGAAAGGAGACACGACGCAAGATTTTCATAACAA
ATTGGTGGAAATGTCCAAAGATTGTAACCAACGTGTTGTCGATTCAGACA
TTTTGAAGAAATTCCCAACCATTGCTGAAGATGAACCTGTCCTGATTTTC
TTCGGAAAATTCCTTTACACTAAAGATTTTACCGGAAAGAGTATTTGCAG
CTTTGGAATACCTATACCCTTCGTCTAAATCACGTGACGATCAATTGGCC
AATAGACGTGAAGTTGGTCAAAAATTACGTAAAGTTGCTTGCGATGTTTG
GTCTTGGGATGGTATTTGTACTACCCTAGCCAATTTGTAAGTGTACTGCC
ACTCTGTGTATATCATTCGGGTATCAAAGATGTTTTGGACAAGCTAAAGG
AGACAGAACCAGAATTGGAAGATTTACTTCATTTACCAGTCGAAAGTGGA
GGTGATTATACTGCAGCCAACGGTGCACATCTCATTAAGATCAAGAGCAA
GCTGATCGTATCTTGGTGACAGGATGTTTAAACCACAAAGAACTTGGTTT
ATTGCTTCCCATGGCATCCATTTCATTGGTCACATCTAAAGCCACCGAAG
CTTTCGGAATGGTCTCCGTCGAAGCCATGTCTGCTGGTATCGGTGAAATT
TTGATGACGTTTCCAACAATGGTCAAGAAATATCCCAAGATGCGTTTGAT
CTTGGTTGGTTTTGGTATTTACAGAGAACACATCGAGATTATGATTCACT
CAATGGTGACAGGAAACAAAGAATTATTCAAATCAGCTGCTCACTGTGTC
GATGAGCTCGGCTGCTCTTTCCTTGAATCGTCTGTTGATATTGATCAGAC
ATTCCAAAAACTTGATGGACCCTGACGTTTTCGACCTTTGCACAAGCATC
GACACAAACAGCAAAAAGTTCTTACAATTGTGTGAAAAACATGTTAACGC
CGACGGAACAGGCCGTGACGCTTCAAAAGTAACCTTACCAGAGAAAGGAG
ACACGACGCAAGATTTTCATAACAAATTGGTGGAAATGTCCAAAGATTGT
AACCAACGTGTTGTCGATTCAGACATTTTGAAGAAATTCCCAACCATTGC
TGAAGATGAACCTGTCCTGATTTTCTTCGGAAAATTCCTTTACACTAAAG
ATTTTACCGGAAAGAGTATTTGCAGCTTTGGAATACCTATACCCTTCGTC
TAAATCACGTGACGATCAATTGGCCAATAGACGTGAAGTTGGTCAAAAAT
TACGTAAAGTTGCTTGCGATGTTTGGTCTTGGGATGGTATTTGTACTACC
CTAGCCAATTTGTAAGTGTACTGCCACTCTGTGTATATCATTCGGGTATC
AAAGATGTTTTGGACAAGCTAAAGGAGACAGAACCAGAATTGGAAGATTT
ACTTCATTTACCAGTCGAAAGTGGAGGTGATTATACTGCAGCCAACGGTG
CACATCTCATTAAGATCAAGAGCAAGCTGATCGTATCTTGGTGACAGGAT
GTTTAAACCACAAAGAACTTGGTTTATTGCTTCCCATGGCATCCATTTCA
TTGGTCACATCTAAAGCCACCGAAGCTTTCGGAATGGTCTCCGTCGAAGC
CATGTCTGCTGGTATCGGTGAAATTTTGATGACGTTTCCAACAATGGTCA
AGAAATATCCCAAGATGCGTTTGATCTTGGTTGGTTTTGGTATTTACAGA
GAACACATCGAGATTATGATTCACTCAATGGTGACAGGAAACAAAGAATT
ATTCAAATCAGCTGCTCACTGTGTCGATGAGCTCGGCTGCTCTTTCCTTG
AATCGTCTGTTGATATTGATCAGACATTCCAAAAACTTGATGGACCCTGA
CGTTTTCGACCTTTGCACAAGCATCGACACAAACAGCAAAAAGTTCTTAC
AATTGTGTGAAAAACATGTTAACGCCGACGGAACAGGCCGTGACGCTTCA
AAAGTAACCTTACCAGAGAAAGGAGACACGACGCAAGATTTTCATAACAA
ATTGGTGGAAATGTCCAAAGATTGTAACCAACGTGTTGTCGATTCAGACA
TTTTGAAGAAATTCCCAACCATTGCTGAAGATGAACCTGTCCTGATTTTC
TTCGGAAAATTCCTTTACACTAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_011360XLOC_011360Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00020254-exon-sc0000350-1575043694:457044..457531TCONS_00020254-exon-sc0000350-1575043694:457044..457531Clytia hemisphaericaexon
TCONS_00020254-exon-sc0000350-1575043694:456045..456306TCONS_00020254-exon-sc0000350-1575043694:456045..456306Clytia hemisphaericaexon
TCONS_00020254-exon-sc0000350-1575043694:454835..455238TCONS_00020254-exon-sc0000350-1575043694:454835..455238Clytia hemisphaericaexon
TCONS_00020254-exon-sc0000350-1575043694:454297..454524TCONS_00020254-exon-sc0000350-1575043694:454297..454524Clytia hemisphaericaexon
TCONS_00020254-exon-sc0000350-1575043694:453752..453898TCONS_00020254-exon-sc0000350-1575043694:453752..453898Clytia hemisphaericaexon
TCONS_00020254-exon-sc0000350-1575043694:453274..453422TCONS_00020254-exon-sc0000350-1575043694:453274..453422Clytia hemisphaericaexon
TCONS_00020254-exon-sc0000350-1575043694:452243..452882TCONS_00020254-exon-sc0000350-1575043694:452243..452882Clytia hemisphaericaexon
TCONS_00020254-exon-sc0000350-1510915933:457044..457531TCONS_00020254-exon-sc0000350-1510915933:457044..457531Clytia hemisphaericaexon
TCONS_00020254-exon-sc0000350-1510915933:456045..456306TCONS_00020254-exon-sc0000350-1510915933:456045..456306Clytia hemisphaericaexon
TCONS_00020254-exon-sc0000350-1510915933:454835..455238TCONS_00020254-exon-sc0000350-1510915933:454835..455238Clytia hemisphaericaexon
TCONS_00020254-exon-sc0000350-1510915933:454297..454524TCONS_00020254-exon-sc0000350-1510915933:454297..454524Clytia hemisphaericaexon
TCONS_00020254-exon-sc0000350-1510915933:453752..453898TCONS_00020254-exon-sc0000350-1510915933:453752..453898Clytia hemisphaericaexon
TCONS_00020254-exon-sc0000350-1510915933:453274..453422TCONS_00020254-exon-sc0000350-1510915933:453274..453422Clytia hemisphaericaexon
TCONS_00020254-exon-sc0000350-1510915933:452243..452882TCONS_00020254-exon-sc0000350-1510915933:452243..452882Clytia hemisphaericaexon
TCONS_00020254-exon-sc0000350-1491911889:457044..457531TCONS_00020254-exon-sc0000350-1491911889:457044..457531Clytia hemisphaericaexon
TCONS_00020254-exon-sc0000350-1491911889:456045..456306TCONS_00020254-exon-sc0000350-1491911889:456045..456306Clytia hemisphaericaexon
TCONS_00020254-exon-sc0000350-1491911889:454835..455238TCONS_00020254-exon-sc0000350-1491911889:454835..455238Clytia hemisphaericaexon
TCONS_00020254-exon-sc0000350-1491911889:454297..454524TCONS_00020254-exon-sc0000350-1491911889:454297..454524Clytia hemisphaericaexon
TCONS_00020254-exon-sc0000350-1491911889:453752..453898TCONS_00020254-exon-sc0000350-1491911889:453752..453898Clytia hemisphaericaexon
TCONS_00020254-exon-sc0000350-1491911889:453274..453422TCONS_00020254-exon-sc0000350-1491911889:453274..453422Clytia hemisphaericaexon
TCONS_00020254-exon-sc0000350-1491911889:452243..452882TCONS_00020254-exon-sc0000350-1491911889:452243..452882Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00020254-proteinTCONS_00020254-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000350supercontigsc0000350:452243..457531 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
128.78	129.675	124.798	116.711	17.466	13.0244	51.6508	55.7132	68.6184	77.1338	49.3078	39.6357	17.4115	13.9648	31.2935	27.4855	43.5511	42.9142	10.6028	10.9195	10.6507	11.2534	39.0133	38.4629	17.6069	22.5795	19.0866	9.1456	23.1571	17.6683
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001296Glyco_trans_1
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00020254 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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