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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00020252 ID=TCONS_00020252|Name=TCONS_00020252|organism=Clytia hemisphaerica|type=transcript|length=1515bp
TTACCCTTTCAGCTAGCATCTTGATTTGTAAATTGTAGACAAATTCCATG
TGTTCCTTGCATCTTTGTAATGCAGGAGCAGTAATGTTTAATAAGTCTTT
ACCATCACAATCAGTTTTCCCTGGATCGGATTTAACGTTGTTTTCTGCAA
AGCTAGCATCTTTGTCTCTCCTGTGTTCGCCATTTTCTGAAATGGTTGTG
CTACTTCCGACTACACCGTTGATATTATCTGCTTTGGGTTCGCCAGTTGC
TGAAATGGCTGTTCCATTTTCGACTTCGCTGTTGACATTATCTGCTTTGG
ATTCGCCATTTTCTGTAGTGGTTGtgtcattttcaattttgctGTTGACA
TTATCTGCTTTGGATTCGCCATTTTCTGTAGTGGTTGtgtcattttcaat
tttgctGTTGACATTATCTGCTTTGGATTCGCCATTTTCTGCAGTGGTTg
cgtcattttcaatttcaccgTTGACAATATCTGCTTTGGATTCGCCATTT
TCTGCTTTGGTTGTGTCATTTTCGACTTCACCGTTGACATTATCTGCTTT
GGATTCGCCATTTTCTGCAGTGGTTGTGTCATTTTCGACTTCACCGTTGA
CATTATCTGCTTTGGGTTCGCCATTTTCTGCTTTGGTTGTGTCATTTTTT
ATTTCGCCGTTGACAATATCTGCTTTGGGTTCGCCATTTTCTGCAGTGGT
TGTGTCATTTTCGACTTCACCGTTGACGTTATCTGCTTTGGATTCGCCAT
TTTCTGCAGTGGTTGTGTCATTTTTTATTTCGCCGTTGACATTATCTGCT
TTGGATTCGCCATTTTCTGCAGTGGTTGTGTCATTTTTTATTTCGCCGTT
GACATTATCTACTTTGGTTTCGCCATTTTCTGCTTTGGTTGTATCATTTT
CGACTTCACCGTTGACATTATCTGCTTTGGATTCGCCATTTTCTGCAGTG
GTTGTGCCATTTTCGATTTCGCTGTTGACATTATCGGCTTTGGGTTCGCC
ATTTTCTGCAGTGGTTGTACCATTTTCGATTTCGCCGTTGACATTATCGG
CTTTGGGTTCGCCATTTTCTGCAGTGGTTGTACCATTTTCGATTTCGCCG
TTGACATTATCGGCTTTGGGTTCGCCATTTTCTGCTTTGGATGTGTCATT
TTTTATTTCGCCGTTGACAATATCTGCTTTGGGTTCGCCATTTTCTGCAG
TGGTTGTGTCATTTTCGATTTCGTCGTAAACAATATCTGATTTATGGCCT
TCTTCAGATGGACTTTCCAAAtcgaattcatttttttttgaatcgAGTTT
TCCATTTTCTCCCTCCTTACTGATAAATATTTCTGGATTCACGATGACAT
CTTGTTCATTGAAGCTGGCGCTTTTTACTTTTCCATCAAGTCTTTTGTTT
TTTCCAGGTTTGAGGTATTTAGTAGGATCAACGTCCATCATTTGGAAGGT
TTTATCTTGTAGGAAGGGCAGCAATTCAATCAGTGAATAAACATCGTTAA
TCCGGTAAAGCATCT Run BLAST on NCBI transcript from alignment at sc0000350:437047..439065- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00020252 ID=TCONS_00020252|Name=TCONS_00020252|organism=Clytia hemisphaerica|type=transcript|length=2019bp|location=Sequence derived from alignment at sc0000350:437047..439065- (Clytia hemisphaerica)
TTACCCTTTCAGCTAGCATCTTGATTTGTAAATTGTAGACAAATTCCATG
TGTTCCTTGCATCTTTGTAATGCAGGAGCAGTAATGTTTAATAAGTCTTT
ACCATCACAATCAGTTTTCCCTGGATCGGATTTAACGTTGTTTTCTGCAA
AGCTAGCATCTTTGTCTCTCCTGTGTTCGCCATTTTCTGAAATGGTTGTG
CTACTTCCGACTACACCGTTGATATTATCTGCTTTGGGTTCGCCAGTTGC
TGAAATGGCTGTTCCATTTTCGACTTCGCTGTTGACATTATCTGCTTTGG
ATTCGCCATTTTCTGTAGTGGTTGTGTCATTTTCAATTTTGCTGTTGACA
TTATCTGCTTTGGATTCGCCATTTTCTGTAGTGGTTGTGTCATTTTCAAT
TTTGCTGTTGACATTATCTGCTTTGGATTCGCCATTTTCTGCAGTGGTTG
CGTCATTTTCAATTTCACCGTTGACAATATCTGCTTTGGATTCGCCATTT
TCTGCTTTGGTTGTGTCATTTTCGACTTCACCGTTGACATTATCTGCTTT
GGATTCGCCATTTTCTGCAGTGGTTGTGTCATTTTCGACTTCACCGTTGA
CATTATCTGCTTTGGATTCGCCATTTTCTGCTTTGGTTGTGTCATTTTCG
ACTTCACCGTTGACATTATCTGCTTTGGGTTCGCCATTTTCTGCTTTGGT
TGAGGTCTCACAAATATCCCTGACTTAGTTATCTGCTTTGGATTCGCCAT
TTTCTGCTTTGGTTGTGTCATTTTCGATTTCACCGTTGACATTATCTGCT
TTGGGTTCGCCATTTTCTGCTTTGGTTGAGGTCTCACAAATATCCCTGAC
TTAGTTATCTGCTTTGGATTCGCCATTTTCTGCTTTGGTTGTGTCATTTT
CGATTTCACCGTTGACATTATCTGCTTTGGGTTCGCCATTTTCTGCTTTG
GTTGAGGTCTCACAAATATCCCTGACTTAGTTATCTGCTTTGGATTCGCC
ATTTTCTGCTTTGGTTGTGTCATTTTCGATTTCACCGTTGACATTATCTG
CTTTGGGTTCGCCATTTTCTGCTTTGGTTGTGTCATTTTCGATTTCACCG
TTGACATTATCTGCTTTGGGTTCGCCATTTTCTGCTTTGGTTGTGTCATT
TTTTATTTCGCCGTTGACAATATCTGCTTTGGGTTCGCCATTTTCTGCAG
TGGTTGTGTCATTTTCGACTTCACCGTTGACGTTATCTGCTTTGGATTCG
CCATTTTCTGCAGTGGTTGTGTCATTTTTTATTTCGCCGTTGACATTATC
TGCTTTGGATTCGCCATTTTCTGCAGTGGTTGTGTCATTTTTTATTTCGC
CGTTGACATTATCTACTTTGGTTTCGCCATTTTCTGCTTTGGTTGTATCA
TTTTCGACTTCACCGTTGACATTATCTGCTTTGGATTCGCCATTTTCTGC
AGTGGTTGTGCCATTTTCGATTTCGCTGTTGACATTATCGGCTTTGGGTT
CGCCATTTTCTGCAGTGGTTGTACCATTTTCGATTTCGCCGTTGACATTA
TCGGCTTTGGGTTCGCCATTTTCTGCAGTGGTTGTACCATTTTCGATTTC
GCCGTTGACATTATCGGCTTTGGGTTCGCCATTTTCTGCTTTGGATGTGT
CATTTTTTATTTCGCCGTTGACAATATCTGCTTTGGGTTCGCCATTTTCT
GCAGTGGTTGTGTCATTTTCGATTTCGTCGTAAACAATATCTGATTTATG
GCCTTCTTCAGATGGACTTTCCAAATCGAATTCATTTTTTTTTGAATCGA
GTTTTCCATTTTCTCCCTCCTTACTGATAAATATTTCTGGATTCACGATG
ACATCTTGTTCATTGAAGCTGGCGCTTTTTACTTTTCCATCAAGTCTTTT
GTTTTTTCCAGGTTTGAGGTATTTAGTAGGATCAACGTCCATCATTTGGA
AGGTTTTATCTTGTAGGAAGGGCAGCAATTCAATCAGTGAATAAACATCG
TTAATCCGGTAAAGCATCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00020252-exon-sc0000350-1575043694:438465..439065 | TCONS_00020252-exon-sc0000350-1575043694:438465..439065 | Clytia hemisphaerica | exon |
| TCONS_00020252-exon-sc0000350-1575043694:437047..437960 | TCONS_00020252-exon-sc0000350-1575043694:437047..437960 | Clytia hemisphaerica | exon |
| TCONS_00020252-exon-sc0000350-1510915933:438465..439065 | TCONS_00020252-exon-sc0000350-1510915933:438465..439065 | Clytia hemisphaerica | exon |
| TCONS_00020252-exon-sc0000350-1510915933:437047..437960 | TCONS_00020252-exon-sc0000350-1510915933:437047..437960 | Clytia hemisphaerica | exon |
| TCONS_00020252-exon-sc0000350-1491911889:438465..439065 | TCONS_00020252-exon-sc0000350-1491911889:438465..439065 | Clytia hemisphaerica | exon |
| TCONS_00020252-exon-sc0000350-1491911889:437047..437960 | TCONS_00020252-exon-sc0000350-1491911889:437047..437960 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000350 | supercontig | sc0000350:437047..439065 - |
Blast
The following BLAST results are available for this feature:
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