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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00020242 ID=TCONS_00020242|Name=TCONS_00020242|organism=Clytia hemisphaerica|type=transcript|length=426bp
ttcagcatTACATCTAAACCTTATCCAAAAAATAAAGTACACTACTTGCT
ATAAGTGATCAAAATGAGCCAAGACATTGATAATTCTCAGCAGCAATTGT
TTTCTGAGgtgGTGGCAAAAAACCAATCTGAAATTACTACTAATTCCCAA
GAAAAGGCTAAAGATCAAACAAAGGCAAAAGATAAAAGGGTGCACCACCA
AAagagaaacaaaagaaatcactCGTTCAAAACGTGGAAGAGGTGACCGA
AGCTTTCAATGAGCTCGCCAAAAATATTCGAGAACATCAGGAGAGTATTT
CAAATGTGCATGGAGTAGGGACTATACATACTGATTTTGGAACGTTGGGT
ACTGATGATGTCAAGACTCTCTTCAAAGATGATTGTCCacaattcaaaac
ttttttcagtGACGACTTTTTCAGAA Run BLAST on NCBI transcript from alignment at sc0000350:387314..388655- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00020242 ID=TCONS_00020242|Name=TCONS_00020242|organism=Clytia hemisphaerica|type=transcript|length=1342bp|location=Sequence derived from alignment at sc0000350:387314..388655- (Clytia hemisphaerica)
TTCAGCATTACATCTAAACCTTATCCAAAAAATAAAGTACACTACTTGCT
ATAAGTGATCAAAATGAGCCAAGACATTGATAATTCTCAGCAGCAATTGT
TTTCTGAGGTGAGTTAGATTATTTTGAACCAAAGATCTTGCCTGGATCTT
TCACAGTTAGTTATCCATCGCTAGAGAGATTAGTTTCATAGTTTTATTTT
TCTTTTTTTTTCTCAGACAACAATTTTGAAAAATGACCAGTAGCAGTAAT
TTACTGACTTTACTAGTTGACTTTGAAAACAACTTATTTTTCTTTTTAGG
TGGTGGCAAAAAACCAATCTGAAATTACTACTAATTCCCAAGAAAAGGCT
AAAGATCAAACAAAGGCAAAAGATAAAAGGTTCAAATAAGTTTAATGATA
CAGTGCTGTATTTGTTTTGTTGGTAATTGAAGTCCACATAGTCATAAGGA
GTAGGACCATTCCAGGGCCTAGTACCTAAAGAAGAACTAGACATTTTTTT
TGGGAAAGGTTTATGTAAAAATGTTACGTTCAATTCATTAAGCACATTTT
ATAACTAACTTATTCATTATAGAAAAGACCACTGGTTATTTGCTGTTAGA
GAGGTATACTTTTGATAGACATTGTATTTCATTTTCATTCTTTTCATTCG
TTTGAATTGTTCATTAAAGANTACTTTTGATAGACATTGTATTTCATTTT
CATTCTTTTCATTCGTTTGAGTTGTTCATTAAAGAATATTGTTAGCTTTT
CTTGAGACACTCCAATAATTTTGAAAACAGACCAACCAAAATGCACCAGA
AAGAAATTCTCATAGGCTTTTCAACTCATGGCTATTTTGAAAAAAAAAAT
TTATTTGATTAATTCTTTACAAATTGTCTCGAAATGGGCAGAATAGTGAA
AGTTTTTTATGTCTGCCCTTGGTGTTATTTTTGGGCCTGTTTAGTGGTAT
TTGCAGGTTTTGACGTGTTTATAACCTCTATTAGCGTAAGCTCAAAATTG
GGCAATGGCAAATGAAGGGCCGGCGTTTACTTTGGGCTGGAGTAAGGTAG
GCGGTAAATTACACTTGACAGGAATAATATTTAATTTGTTAACTTTTGCT
ATAGGGTGCACCACCAAAAGAGAAACAAAAGAAATCACTCGTTCAAAACG
TGGAAGAGGTGACCGAAGCTTTCAATGAGCTCGCCAAAAATATTCGAGAA
CATCAGGAGAGTATTTCAAATGTGCATGGAGTAGGGACTATACATACTGA
TTTTGGAACGTTGGGTACTGATGATGTCAAGACTCTCTTCAAAGATGATT
GTCCACAATTCAAAACTTTTTTCAGTGACGACTTTTTCAGAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00020242-exon-sc0000350-1575043694:388548..388655 | TCONS_00020242-exon-sc0000350-1575043694:388548..388655 | Clytia hemisphaerica | exon |
| TCONS_00020242-exon-sc0000350-1575043694:388277..388356 | TCONS_00020242-exon-sc0000350-1575043694:388277..388356 | Clytia hemisphaerica | exon |
| TCONS_00020242-exon-sc0000350-1575043694:387314..387551 | TCONS_00020242-exon-sc0000350-1575043694:387314..387551 | Clytia hemisphaerica | exon |
| TCONS_00020242-exon-sc0000350-1510915933:388548..388655 | TCONS_00020242-exon-sc0000350-1510915933:388548..388655 | Clytia hemisphaerica | exon |
| TCONS_00020242-exon-sc0000350-1510915933:388277..388356 | TCONS_00020242-exon-sc0000350-1510915933:388277..388356 | Clytia hemisphaerica | exon |
| TCONS_00020242-exon-sc0000350-1510915933:387314..387551 | TCONS_00020242-exon-sc0000350-1510915933:387314..387551 | Clytia hemisphaerica | exon |
| TCONS_00020242-exon-sc0000350-1491911889:388548..388655 | TCONS_00020242-exon-sc0000350-1491911889:388548..388655 | Clytia hemisphaerica | exon |
| TCONS_00020242-exon-sc0000350-1491911889:388277..388356 | TCONS_00020242-exon-sc0000350-1491911889:388277..388356 | Clytia hemisphaerica | exon |
| TCONS_00020242-exon-sc0000350-1491911889:387314..387551 | TCONS_00020242-exon-sc0000350-1491911889:387314..387551 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000350 | supercontig | sc0000350:387314..388655 - |
Blast
The following BLAST results are available for this feature:
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