TCONS_00020228 (transcript) - C. hemisphaerica

Overview
NameTCONS_00020228
Unique NameTCONS_00020228
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3639

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00020228 ID=TCONS_00020228|Name=TCONS_00020228|organism=Clytia hemisphaerica|type=transcript|length=3639bp
tttttttcgttcgttcgttgaGCTGGTCTATTATAAGGTATAGTTGTTAA
AGAGACAAGTGGATTGAACAAAAAATCTCGATTTCTGAGGAGACTTGAAT
CAATCAAGATTGTTAAAGCGAGAAAAATTCCATAGCTGAAGTGATTGAAG
ACCCGGTCAAGCCGACCTTGATTCAACAAGAACTTGAATGCTTGAACGAA
GAAATCATCAAGAATCTGTTAGACGAACAAGATGACATCCTCTTAAAATC
CTCATCCTCGTCAACAAACTCTACCGCTTCGCTTGGTGTACCTTCTGCAT
CGACGGCGTCATCGCAGCGATCGCTGAATGATACGCCAACGTACGGCAGT
TCTGACGGTGAAGCATTTACCGGCACTTTCTACAACGGCTCCATGATTTA
TTCACCCGCACAAACGATCGAGGGGTCAGTTTCCCCGCCATCCAACCGAC
GTTTCCCGCCCATGATGGAAGCGTTAAAACTTACAGATCGATTTGACGCC
CCACACACGCCACTCACTAACGGGCACACTTTACCGCGCAGCCACAGGCG
GACACGAACCACATCGAGCGGCAGTTCAATAAGCGATGATGGTGCACTTT
CGTCGCCTACTTCACCTTTCGGTCGCGGCACTTTCGGCAGACGATTCAGA
AGCACTGGAAGTAGTACGTCCTCGATCTCCTCGACGAGCGACTTATTTCA
AGAAGTGTTGAGATACCCGGCCGTGAAATTCGATAAAGACACGGTTGACT
TGTGGTATCGACCAAATATCACACGAGATGAAGCAACAAGCTTACTTCGA
GACGCAGAGCCAGGAAGTTTCTTGGTACGAGATAGTCAAACCTATGATGG
AGCTTTCGGATTAGCTGTGAAAGTGGATTCGCCACCTGCCAGTGTCCTGA
AACAAGTCGATGGAGATGTTTCGAAAATCGATTTAGAGAACGAACTGATA
CGTCACTTTCTTATCGAACCTTCGAAGAAAGGAGTGCGCTTGAAGGGAAG
CAACGAAGAACCAACTTTCCCTAGCCTAGTTGCCCTCATCTATCAACATT
CCATCACTAAGATGGCCCTCCCAATCACTCTTCTTATACCTTACAAAGAC
TCAGTTGACGGTGGCAACCCTGCAGACAACCGACTGTCAAAACTCAGCGA
AACACAATTACTGGTCAAAGGAGCAGCATGTGATTTATTATACCTGGGCG
GTGTGAAGGTGGACAAGCTAACGGGTGATGGAGCTGTCCAGTACGCCATG
AACAAGGTGGCATCACTTTCCACCCAATTAAAGACTACAATCGTTAACAT
CAAAGTCAACCAAGATGGTATCACCCTCACCGATAACAATCGAAGGATGT
TTTTCCGGCAACATTTCCAGATGGCGAATGTCCTACATTGTGGAGTGGAT
CCAAAATCACGACAAGTTAATTTGAAGACATTCGCGAATCGTGAAGACAA
AGATGTCGGTTGTTTCGGCTTTGTGGTAGAGAATGAAAGGAAGACAGAAC
ATCAATGTTACATGTTCGCTGAACTGGAGCAAGATCAACCAGCTTCGGCC
GTCATCAATTTCATACATAAAGCCATGCGGTACGCTCGTGTATAAACTTT
AATGGTGGTGTTGGATTATGTTTCAGTTGAGAAGCAAACGTAATGGAGAA
AAATGGTTCCTATTCCACATGAGTAGCGTTCGATACGTAGTTTGGCTCAA
CGGTAGAAGAGCACGCGTTCTCAGACCAGATGTAGAATTCGGGAAACCTA
TATAATACAATCATGTTAGaactgtaaaataaaaaaaaatcatctaaCGA
AAAACAAATCTGCTGTGGTAACAAAATAAGCATAAGCTAAACAAAGACAT
ATAAAAGCAAATTTAATTTCGAAGACAAAAGATGGAAGATGTTTTATTGG
TAAAAtacagactggtctgtaaattatatttatacactttttttatttac
ttactGTCATGGTTTCGGTGACAGCATGCAGGGATTTCCCGAGCTGTTAA
TTAAAATATACATTTAATTGTAAGCATTTTACTGTACAAAAAATTATTCA
CTCTCAGAGGGTCAACGATATAGGTTGGTTCAAcgctcaaaattttcaaa
gacaaccTTTCAGAACATTTTGCTACTCAGTACTCAAATACTTGTTTTTT
acaagcataacgtttataagcatacgtaGGCTCACTATTTGGTACccaaa
caatggctctattgaaCAATCGAATGCTAATCACATTGCGAGCCTGGTAT
AGGTGCAGACACTTgctcataaaaaaacatgtaatatcGAATTCAAACTG
GTGTCTCTAagagaaaaagtaaatttttgttttgaagaattttcataCTG
TTGGCTTCTTGGCTACAATACATGGGAACTTGATTTGATTAAATAAAAAG
CAATTTGTTATACTTTGTAATATTATCGcgaaatatatttgaaaatattc
caaTGTTTTTTCTACGTTTTCTAAGATATATAGTTTTACAATATTCCTTC
TTTgttatttaaaaagataaacacCCTTTATTATGTAAATAGATCTTATc
ttaaaaaatctataaaattaaCATCTTCTGACTTTATATCCTAAACCTCG
AATAAAAGGTTGCTTTCTGATGCAGATCAATATGATAATTCTAATTCGCA
ATGATGGACTNATGATCTGGTCGAATGTCTTCTGACTTTACATCCTCAAC
CTCGAATAAAATGTTGCTTTCTGATGCAGATCAATATGATAATTCTAATT
CGCAATGATGGACTTATTGGTATACTTAAAAAGAgctaaaaacagtaaaa
aaggcctttaaaaaatgtacaaaatctAATCAGAGgataattatcaaaat
aaataatttttcaagttCTATAATAAGATATTTTAGGTGTGACTCGTCTA
CATCTTGAATTGAGTTTCATCTATAAGAAGTATGTAAAAAACATTGTTGA
ATCTCATAACTTGGCACTGCTTGGCAATGTACCCATTTAATAGCATATAG
TCATGCACAAcgttaaaaggaaaaaaatcccaaaaacaCAGCAAGCAGCA
aactcaaattttaaagcttttatcACCTTTCTCCAGCCTACATAAAAAAG
CATGCAGGAAGGAGCCTTGTCAAATCGCAAAAATTTTCTGTATGTTTTGT
ACGCCATcactcaaaattttttaaactcttATATTAGGCCTTCTTTCAAC
ATTTAAAATCTTACATTTTGATGGAAAATGCCTTTTTTCTCTGTGAGCTG
TATCGTCTGGTTTAAAAGCTGTTAAGCGATCAGTTTTATTTTCTGCCAAG
TCTGATTTGAAAACCTTACTATCAAATGCATTCTTGCAATGTTTTCGTTC
AGCCCGAGTCCAATCTTGACTTGCAATTCTTTCGACAGTGCACCAAGATT
CCTTGTCCATATCTATTTCCTATTCTAAATGTCTGCAaaataagaagata
aaaaatttcccTTTCAATCACAATACATATATGAACAAGAGATATATTTA
CTATGTTTAAAGATTCTACTTAAATCTAGAAAANTTACATATATGAACAG
AGATATATTTACTATGTTTAAAGATTCTACTTAAATCTAGAAAAGAGCAG
TCAACTTTTCTTTCGACTTTTCAACAGTCTGAtactttg
Run BLAST on NCBI

transcript from alignment at sc0000350:254040..265714-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00020228 ID=TCONS_00020228|Name=TCONS_00020228|organism=Clytia hemisphaerica|type=transcript|length=11675bp|location=Sequence derived from alignment at sc0000350:254040..265714- (Clytia hemisphaerica)
TTTTTTTCGTTCGTTCGTTGAGCTGGTCTATTATAAGGTATAGTTGTTAA
AGAGACAAGTGGATTGAACAAAAAATCTCGATTTCTGAGGAGACTTGAAT
CAATCAAGATTGTTAAAGCGAGAAAAAGTAGGTTTACCGATTTAAGGTTG
TCTATATAATACAGCTCTTTTGCCAAACTTCGTCTGAGTTTTCTTCGTGT
TGATACTGTCAGCGTAGAGTCAACATCTAGAGTCATTTAAGGATTTCACA
TACAAAAATTGCATGGATTAAGTGTGTAAGGTATTATTCATGTGTTTGTA
TGATGGGCGCTATATAAGGTATAAATACCTTTTCCCTCTCCGTTCTCCTC
GTGTAGAAATAGTTTATCCTTTGGATTCAAAATTGATTTTTGCTTTGATG
GTAATGCTTCTTACACTTCTAAAGGGAATAGAAAATTCTTGTTGTAAAAG
TTGTAATGTGAATTTTTTTACTGATATGTATATTCACCGACATGGTTAGA
TCAAGGTAAGGAGTTTTCGGTGTAAAGCATACTTCTCTAAAAGGAAACCT
TTTGAAATGTCTCACGAAAACAACAGTCAAGTGTCATCTGATAGACCTTG
GGTGTTCTCTTAGATAAGATTGCTGTTCTGTGGCTGTATAGTCTGGTGGG
ACCTGCTGAACTTAAGATCGTTAACGAGCACTAAATAGTTTGACAAGTAC
CTGTCCTTTTCGGTATTATGAATACGATGAACCTTGCATAAATGAACCTT
ATACGAAACAAAAGTATATCCGGAAAATGCCATTTGATCCGGATTGCTTC
AATTATCCGGACTTTCCGTATTTGAGAGAAATACAATTTATATATGGCTA
CTGTTGCGTGTTATTTTTGGGATGTTTTAAAAATTGTTTTGATTACTTAT
AGAGGGAAATTAACTTGATGTTACAGAATTTGTTTTTACNCTAAAAATTG
TTTTGATTACTTAAAGAGGGAAAGTTAACTTGATGCTACAGAATTTGCTT
TTACTGTGTTAACTTCGTGTTAATTTTCACTATAAAGATCTTCCTTCCTT
TGAGAGACAAGGCTTTATAGTCTCTATGTCACCACTGTGTTTTTCATTAG
AACTTATTCTTTCTATAAGCACTTTTTTAGAAAGTTGTAAAGAAGAAAAA
GACTGGATCTTGAGACACGGCTTTTGAAATATGTAGCCACTAATCTACAA
TATCTGGAGACTGGTTTTCTAAAATTTGTACTGAAGGAATCGTCGGGAGA
CTGAAAACGAGAGTTGGACAATCAAGTGCATTTTGTGGTTGCGGGGATTG
AATAAGTCAAAGTGCTTATATAGAAATGCTAGCCAGTTGATTATTGAAGG
TTGTCACCTCAGTTTTTGTGTTGTACAGAGGACCGGTAATTCAACATCAG
ATGTCAACCAATGTTCTTATTTGATGTAAATTGAATGTTTATATTCGCGC
CATTCAAAACGTATGAAACACTACAATCAGAACTTCATACAAAAAAATCT
TTCAACTACTTGTCAAAAACGTACAAATGTACTGATGAACTATGAGGATA
GAAAGTACATGTCTTTCACGAAAACGAACTGATTGATTTGTGTTGATTTT
ATGTTTTTGCGGGCTTTTTGTCCGTTTGTCATTTTTTCTTACCATTCATT
TTGTGGTGAAGGATTGCTTTTCCGTTGGCTGTCTATCGGTGACAACATTT
CTATATTTATAATATTGCTGAGGAAAGGACTCGCGTGGACCACCAATTTT
TACTCGTTCCAATTTTTATTATTGTTGTTGATGAACCGAAGCTCGTAAGC
GGAATCAAAGAAGAGGCGTTATTAGAAAACAAAACAGTGATTTCATTAAA
ACGAAGATTAAATGATAATTTAGTGAACCTTCCAACGGATGATTAGAGAT
TTATGTTGTTTTGTTGTGGATATCAATCGTTCAAATTGAATCCTGTTTAT
TTAAGTTTTGAAAAAGGATATTGTGTCATTTCTCATCTCTCTCTTACTCA
CTATTCATCCGTCGTGTATTTTAGTACGAAATTCAGTGAACTTTTCATTG
TCACTACACTTCAAGTATAGATTTAACACGGAAAATACCTTTCTTGTGCA
CATTGAACATTTTTTGTTTGTGGAATCGAGTTTGAGGAGACTTTTGGCTT
GTGTTGGACTTTTGAAAAGATAAATTTTACTGCGTGACATTATTTCATGG
TCGTAATACGTTCAAGATGACGTTACTCGATCAACTCTGGGAAGTTCTCC
AATCAAGGTGCTCATTAATGGAGTTTAAACTATGAGTTTATGTCTGAGAT
TTGCGGAGAAATCCTCTGCCCATTACTCTGTAAAAGTTTGGAAAGGAATG
TTGCGAGCATTTCCGAGAAATTCAGTTGATATCGCCAACGATTCTTTTTT
TCTACGATTGCCTTTGTCGTCGATTTTGGAAGATAATTTTTCAATCCTGA
AAGGCTTCGTAAGAGAGAAGCAACCGATTCGAATCTACTGGGATAGGAAA
ACCGGGATGTCCTCGAGTTGTGAGACTGGCTCAAAAATCAGATTTAAAAA
ATGTTTAAGCTTTCAGTGATGAAGAATATCTTCAATACCTTACGTAGTAA
TATTCGCTTTTGTGCCCCTGTAATTAGTCTCCCGTTAAACCCTTGTTAAC
CCATTTCTGTTTTATTTCGTACACAGTTCCATAGCTGAAGTGATTGAAGA
CCCGGTCAAGCCGACCTTGATTCAACAAGAACTTGAATGCTTGAACGAAG
AAATCATCAAGAATCTGTTAGACGAACAAGATGACATCCTCTTAAAATCC
TCATCCTCGTCAACAAACTCTACCGCTTCGCTTGGTGTACCTTCTGCATC
GACGGCGTCATCGCAGCGATCGCTGAATGATACGCCAACGTACGGCAGTT
CTGACGGTGAAGCATTTACCGGCACTTTCTACAACGGCTCCATGATGTAA
GAATGCTTTCACTTTGTTTGTTTGTTACTCCTTGTAAAGAGTTACCCATT
TCAAAGTGCCTGCAATTCGTAAGGATTAATCAAAACTGCCTATAAGATAA
CGACTTCTTCTAAAACATGATTTTTGTGTGCAACCAACAGTTTTGATTCC
TCATGATTTATTGTGATCGTAGCATGAAATTTTAGATAGGCTATAATAGC
TGTTTGTATGCTTCCCATCGCCATAATCGAGCAAAAAAAGTGCATAGTTT
GATATTTCATAAAAGTATTTGAAGCTTAGAATGTAGCTAGTGTAGACAAG
AATCAGGGCTTTCTTTGTGACGGTTTTTCTTGTATTGATATTTTGAAACT
GTATAACTGGTTTTCCAAGGTGATGAAATCCACCAATTTGACATTTGAAA
CTTATCTTGAAAGTCATATTTTCGAAAGTTGATTTTCAATACGAATTAAA
ATATTTTGAAAACTAGATATAAATTTATCGCTAAATTTAGAAATCACTCA
GCAAGTTTTGTTATAAAAATAACTTTTTTCATCGTTAAGATTTGCTTCAT
GTGTCAACTCAATATATAAAGTCGACAAGATAAGATTCTTTCCACTATTA
ACATCACGTTTTAAGTTTGGTGTGAAGTGATTAGATTTGGACGTGATTCT
TACTCCTGGCTCCTGTCATTATTGAATATACAGTAATCAATTTTTTGTTC
TTCATTCCAAGAAACGAAGTCAGCTTTACGTCACTCTATAATTACATTTA
TCGTAATTATTGAAATCAAAAACATTTCGGATATCTTTTGTTCCATCTTC
ATCTACTCAGAAAGTAAAAAAGTTTCTCACAGAATTTATTGAAGGTAGAT
TTAATAGTGAAAACACCTGTAAAGATGCCAGGTCTTTATAGAAATCAAAG
AAAAGGCCAACACGGTTCTCTACAAGACAGGTAGTCATTGAGTTCTGAAA
TCAATTTTGACATACGCAAAATTTCTTAACGGTATCTTTTGGCTTACTAA
ACTAGATAAAGTAACAGTAAGGGATGATGAATGAAAAGCTTTTGTGTGTA
AATCAACTTATAAACTAACTAACTTGACTATTCAATTGGAATGTTTGGAT
GAATAAACGAGTTAGCAGGAGATCGTTTTGATGTTATTTCCTCGTTCTCT
TGTTCAAGTCAATCTGAAAGAGAGCGGAAATTCTCCACATCGATTGGATT
TGAATCTCAACTTTAAGAAATTTCTTTAATTGATTTAACGCTGTCTTTCA
CTTTGGCCCTTGTTGAAAGACAATTCTGTAACGGCTTTTAGGTGATGTGT
GTGTATGGTTTTGTGTTTTTGAAGAGTTCTCGTTTAGCAGACGTTAGTTT
AGCCTCTTTGTCATTGTTGGAAAAGTGTTATGCGAGGGATGGTGTTTTCA
GCTAATTTTGATAATTGAGATTGACGATATCTGTGTCGTTCGAGTTCCAT
GTATTTTGATTTGATTACTGTTACTTGGTATCCATGATTTGACTGCTGGT
TCAACTACATTTAAGCCTTTAGAATCCAAAGAAAGTCTGATATTTTGAAC
AACAGTGTCACCGCTATAACTAAAATGTTAACGAAGTTTTTTCAAATGTT
TTCTTTCAGTTATTCACCCGCACAAACGATCGAGGGGTCAGTTTCCCCGC
CATCCAACCGACGTTTCCCGCCCATGATGGAAGCGTTAAAACTTACAGAT
CGATTTGACGCCCCACACACGCCACTCACTAACGGGCACACTTTACCGCG
CAGCCACAGGCGGACACGAACCACATCGAGCGGCAGTTCAATAAGCGATG
ATGGTGCACTTTCGTCGCCTACTTCACCTTTCGGTCGCGGCACTTTCGGC
AGACGATTCAGAAGCACTGGAAGTAGTACGTCCTCGATCTCCTCGACGAG
CGGTAAGTGTAAAAAGAGTCTTATCTTTTCATATTTGGGTCAGATATAAA
CTAGTAGAATAATGGTGAAATACCCTTAGATTCTCCCATTATTTTTTCCA
CTTTTTAAAGAAGGAGACAATTAATCGCTTTCCATATCATAATTTCACTG
TTTATGTCATACTTGTCGGCGAGTGTCGGTTTGATGACGTCATGCTTTTG
ATCAATTAGGTCAGTCAATGTCGGTCGTTTTAATCTCATTGCGGGTGTAT
TCAAGACGTTAATGAACGGGGCAAACTATAATGGATCGGGCACAAATCTT
TAATGGGTTTAAAAGGTGACTTAGGCTTAAACTCTAGCTGACGTTAGCTA
ATTGTTTAAGGGCTGGATTGTTTTTGATCATTTGAGCTCTTTAAATTGAT
ATGTTATCAAACGTCGTTCACTCTTCCATTGTTTGCTGTAAGCCTCACAA
AACAACAACAAAATGTATAGTCTAAAATTTTAAATTATGTTCATCTTCTC
TCAATATGATTATATCCCATTAATTAAGAACCAAGTTATGTTACAAATTT
TTGAAAGAAAGCTTTCAGGGAAGTACAAGTTTACTTTTTATTACACTTTT
TTTATATAAGAACAATAAGGCTCAAAATCGCCAAAAAATAAGAACAACGC
TGAGCCTGAAATTACTCAAATTCAAGTAATTTAGAGGTGAAAGTCGTAAA
AATTGGGTATAACGCCTAGAATACCTCAATTACACCTTATAAATAAGAAC
AGGATAAGAACAATTTGAAGCTCAAAGTGCCAAAAGAATAAGAACAACAG
AGCCTCAGAAAAATTTTACTGATTCTTATAAAAAAAGTGTATGCAGTCAA
AACGGTCTTTATCAGGAAGACAAAGATTTGAGTCGAAATCAACGACATAA
AAACTTGTTATTTGCACTCAGACAAAGCTTGAGCTAATCCGGAAAAGGAC
TTAAATGCTTTCAGTCTAGTATTTTCCCAGGCTAAATGATTAGTTAAGTC
TCATTAAGAAGTCTCTTAAACTTTCAAATGTTTGTATGAGCTTAGGGAGG
AGTTTTTGGTCATCTTTTTCTGAAAATTATTGTCTTGTTTGGAAAAGTCA
TTTCTTGTCTTATTTCCTTGTTACAAATCCAATATGTTGTCTCTTTTGTG
TCACTTTGTTAGGTGTCAATATTAGAAGTTCAGCTTGTTCCCTTAATTTC
CTGATTTCATCAACCTAAATAAACTTTAGGCCTTGAGATTAAACGTTTGA
CCAGAATTTAGCTTGATATGACGGGAGAAGCGGAAAAAAGGTTAACAATA
TGAAAGAACTAGATCCTGTTTAGGATATTAGAAACAAACTACCAGCTCGC
AGTTCTATAAATCGGTTAAAAAATTCATCAGAACTTAAACATTAGATTTC
CTCATTCATTACAGACTTATTTCAAGAAGTGTTGAGATACCCGGCCGTGA
AATTCGATAAAGACACGGTTGACTTGTGGTATCGACCAAATATCACACGA
GATGAAGGTAAGTTCTTTTGATTGATATTCTCATAATAAACAAACAGGAT
CTTTCAAAGCTTTATGAAGAAAAAATGCTACAGGATCGTACCAAAGTTCT
TTCGCATAAGCTTTAAAACGTTTCCTTTGTACCTCAATAACTTTTTTGGA
TTTCCTGGATAACCATTCGGCTAGCTTTATTATCCCTATACTGATTCTTG
CAGCATAGGGAGACATTAAGTTCAACAATTTAACGGTGAGTATACCAATC
ATTTAAGACAATGAATGGACCCGGTGAGCTGCTTGAAGTGAGAGATTGGG
CGACGAAAATTTTTTCACATTCTTCTAAACACGATAAGATGATATTTAAA
TGGGTCAGATTAGGATTTTGACTTTGACAAATACATAGCCTGCAAAAAAG
TTGACGGGGCCCATAATTTTAAAGATGGTATTGTCGGTCAAAAAGTTGAG
CTCCTCGCTCCCTAATATCGCTTGAATCTTCCTCAGCACACGATAAAACA
CGATAAATATAATTCTTCTCATCTTTGTAGCAACAAGCTTACTTCGAGAC
GCAGAGCCAGGAAGTTTCTTGGTACGAGATAGTCAAACCTATGATGGAGC
TTTCGGATTAGCTGTGAAAGTGGATTCGCCACCTGCCAGTGTCCTGAAAC
AAGTCGATGGAGATGTTTGTAAGTTTAACATTTTGGATTTGTTTAAGATG
TATAAGTGAATTTCATATTCACATTCACCCTATGATTACTATGACGAAAA
TGAGTTGAACTATTTGATAATGTCAGTGATAGACGCGAAACTTGTTTGTA
GAGTCGTCGCTCTATTTTAATGATCATTCTTCCTCCTCTTTAATGATCAT
TCATCTTAATGATCACCTTCCCTATATTCTTTGAAGAAAACTTTTCCAAT
ATTCTCTGTTTTAGCGAAAATCGATTTAGAGAACGAACTGATACGTCACT
TTCTTATCGAACCTTCGAAGAAAGGAGTGCGCTTGAAGGGAAGCAACGAA
GAACCAACTTTCCCTAGCCTAGTTGCCCTCATCTATCAACATTCCATCAC
TAAGATGGCCCTCCCAATCACTCTTCTTATACCTTACAAAGGTAAGCTTT
GATTAACACTTTCATTGAAAGTTTATGGAGTCATCTTCTATTAAAACCTT
TCAAAGAATTGATTCCCTTAACATGAAACTTAGACGAGAACCTAAAAACG
TTCCTGGCTTGAATTAATTTCCAAAGGCATCAATTTTTTATATGTTATGG
TTAAACAGCGATAAGCCATAATCGTTGAGGCAGACTTTGATTACCCTGTG
GGTCATCTATTTCGTTATGAATCTAACGACAAAGTAATGGTGTAACTTCT
TATCTTCATATTGATAGACTCAGTTGACGGTGGCAACCCTGCAGACAACC
GACTGTCAAAACTCAGCGAAACACAATTACTGGTCAAAGGAGCAGCATGT
GATTTATTATACCTGGGCGGTGTGAAGGTGGACAAGCTAACGGGTGATGG
AGCTGTCCAGTACGCCATGAACAAGGTGGCATCACTTTCCACCCAATTAA
AGACTACAATCGTTAACATCAAAGTCAACCAAGATGGTATCACCCTCACC
GATAACAATCGAAGGTTTGTCTCTATTTTCATACAAACATATATCAGTCT
AATCGAAGCTGAGAATATGAAAAAAGCTCCGTTCTTGTAATTAGAGAATA
GACTTCGACTTGACTGTCCGAAAATGGCGGACAATTTAAAAAAGCAAGCA
CGCGAACAAGAGATCTTTAGATCTCAATTAAAGTATGTTTGGCATAACAT
TTAAAATCCTGCTCCTGTTTCCAGGATGTTTTTCCGGCAACATTTCCAGA
TGGCGAATGTCCTACATTGTGGAGTGGATCCAAAATCACGACAAGTTAAT
TTGAAGACATTCGCGAATCGTGAAGACAAAGATGTCGGGTAAGAGTCTAC
TTTTTGTAGATTATATAGCTTAATTCTTTCGTTTACATGTTTGTTTTATA
AGCATTGCACGTATAAGCATATCTAGGCTCAGATATTAGTAGGGGGAAAT
TTGTTCGTTTTTTTGAGGTCGCTCGATTTTTTTAGTCAAAGCACTTGTTA
TACATTTTTGGAAAGCTAAGGGGTAGGGGAATCAAANNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNCCCAAGTTATTTTGATTCCCCTACC
CTTTAGCTTTCCAAAAATGTATAACAAGTGCTTTGACTAAAAAAATCGAG
CGATTTTACAAATTTCCCCCTACTATATGTCAAAAATCTAATCATACACA
GTAATGATTTTGCCCTGTTTTTGGCTGAAATTTTACGGTTTCTCTGAATA
TTCCTATGATTTTTGCATGAGGAATATAAGCACCCTTATAAGCATTTTTT
AGCCTTGTCAAGCCCTCGAACTAAGCACCTCCGAGCCTGTTTTCTATATT
TATAAAAAACATGTATCTGGATATCTTGGTTTTATCGGAGCTCGTTTAAA
GCTTTTATAGAGTAGGGTTTAGATAAGGGTTTCGAATTCAAGATTTACAA
CCCATACCGTCATATTTGAACGTTCATTTTTGTTTCCCTTTTTAGTTGTT
TCGGCTTTGTGGTAGAGAATGAAAGGAAGACAGAACATCAATGTTACATG
TTCGCTGAACTGGAGCAAGATCAACCAGCTTCGGCCGTCATCAATTTCAT
ACATAAAGCCATGCGGTACGCTCGTGTATAAACTTTAATGGTGGTGTTGG
ATTATGTTTCAGTTGAGAAGCAAACGTAATGGAGAAAAATGGTTCCTATT
CCACATGAGTAGCGTTCGATACGTAGTTTGGCTCAACGGTAGAAGAGCAC
GCGTTCTCAGACCAGATGTAGAATTCGGGAAACCTATATAATACAATCAT
GTTAGAACTGTAAAATAAAAAAAAATCATCTAACGAAAAACAAATCTGCT
GTGGTAACAAAATAAGCATAAGCTAAACAAAGACATATAAAAGCAAATTT
AATTTCGAAGACAAAAGATGGAAGATGTTTTATTGGTAAAATACAGACTG
GTCTGTAAATTATATTTATACACTTTTTTTATTTACTTACTGTCATGGTT
TCGGTGACAGCATGCAGGGATTTCCCGAGCTGTTAATTAAAATATACATT
TAATTGTAAGCATTTTACTGTACAAAAAATTATTCACTCTCAGAGGGTCA
ACGATATAGGTTGGTTCAACGCTCAAAATTTTCAAAGACAACCTTTCAGA
ACATTTTGCTACTCAGTACTCAAATACTTGTTTTTTACAAGCATAACGTT
TATAAGCATACGTAGGCTCACTATTTGGTACCCAAACAATGGCTCTATTG
AACAATCGAATGCTAATCACATTGCGAGCCTGGTATAGGTGCAGACACTT
GCTCATAAAAAAACATGTAATATCGAATTCAAACTGGTGTCTCTAAGAGA
AAAAGTAAATTTTTGTTTTGAAGAATTTTCATACTGTTGGCTTCTTGGCT
ACAATACATGGGAACTTGATTTGATTAAATAAAAAGCAATTTGTTATACT
TTGTAATATTATCGCGAAATATATTTGAAAATATTCCAATGTTTTTTCTA
CGTTTTCTAAGATATATAGTTTTACAATATTCCTTCTTTGTTATTTAAAA
AGATAAACACCCTTTATTATGTAAATAGATCTTATCTTAAAAAATCTATA
AAATTAACATCTTCTGACTTTATATCCTAAACCTCGAATAAAAGGTTGCT
TTCTGATGCAGATCAATATGATAATTCTAATTCGCAATGATGGACTNATG
ATCTGGTCGAATGTCTTCTGACTTTACATCCTCAACCTCGAATAAAATGT
TGCTTTCTGATGCAGATCAATATGATAATTCTAATTCGCAATGATGGACT
TATTGGTATACTTAAAAAGAGCTAAAAACAGTAAAAAAGGCCTTTAAAAA
ATGTACAAAATCTAATCAGAGGATAATTATCAAAATAAATAATTTTTCAA
GTTCTATAATAAGATATTTTAGGTGTGACTCGTCTACATCTTGAATTGAG
TTTCATCTATAAGAAGTATGTAAAAAACATTGTTGAATCTCATAACTTGG
CACTGCTTGGCAATGTACCCATTTAATAGCATATAGTCATGCACAACGTT
AAAAGGAAAAAAATCCCAAAAACACAGCAAGCAGCAAACTCAAATTTTAA
AGCTTTTATCACCTTTCTCCAGCCTACATAAAAAAGCATGCAGGAAGGAG
CCTTGTCAAATCGCAAAAATTTTCTGTATGTTTTGTACGCCATCACTCAA
AATTTTTTAAACTCTTATATTAGGCCTTCTTTCAACATTTAAAATCTTAC
ATTTTGATGGAAAATGCCTTTTTTCTCTGTGAGCTGTATCGTCTGGTTTA
AAAGCTGTTAAGCGATCAGTTTTATTTTCTGCCAAGTCTGATTTGAAAAC
CTTACTATCAAATGCATTCTTGCAATGTTTTCGTTCAGCCCGAGTCCAAT
CTTGACTTGCAATTCTTTCGACAGTGCACCAAGATTCCTTGTCCATATCT
ATTTCCTATTCTAAATGTCTGCAAAATAAGAAGATAAAAAATTTCCCTTT
CAATCACAATACATATATGAACAAGAGATATATTTACTATGTTTAAAGAT
TCTACTTAAATCTAGAAAANTTACATATATGAACAGAGATATATTTACTA
TGTTTAAAGATTCTACTTAAATCTAGAAAAGAGCAGTCAACTTTTCTTTC
GACTTTTCAACAGTCTGATACTTTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_011353XLOC_011353Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00020228-exon-sc0000350-1575043694:265588..265714TCONS_00020228-exon-sc0000350-1575043694:265588..265714Clytia hemisphaericaexon
TCONS_00020228-exon-sc0000350-1575043694:262769..263038TCONS_00020228-exon-sc0000350-1575043694:262769..263038Clytia hemisphaericaexon
TCONS_00020228-exon-sc0000350-1575043694:260863..261155TCONS_00020228-exon-sc0000350-1575043694:260863..261155Clytia hemisphaericaexon
TCONS_00020228-exon-sc0000350-1575043694:259358..259450TCONS_00020228-exon-sc0000350-1575043694:259358..259450Clytia hemisphaericaexon
TCONS_00020228-exon-sc0000350-1575043694:258697..258834TCONS_00020228-exon-sc0000350-1575043694:258697..258834Clytia hemisphaericaexon
TCONS_00020228-exon-sc0000350-1575043694:258274..258450TCONS_00020228-exon-sc0000350-1575043694:258274..258450Clytia hemisphaericaexon
TCONS_00020228-exon-sc0000350-1575043694:257751..257997TCONS_00020228-exon-sc0000350-1575043694:257751..257997Clytia hemisphaericaexon
TCONS_00020228-exon-sc0000350-1575043694:257427..257540TCONS_00020228-exon-sc0000350-1575043694:257427..257540Clytia hemisphaericaexon
TCONS_00020228-exon-sc0000350-1575043694:254040..256219TCONS_00020228-exon-sc0000350-1575043694:254040..256219Clytia hemisphaericaexon
TCONS_00020228-exon-sc0000350-1510915933:265588..265714TCONS_00020228-exon-sc0000350-1510915933:265588..265714Clytia hemisphaericaexon
TCONS_00020228-exon-sc0000350-1510915933:262769..263038TCONS_00020228-exon-sc0000350-1510915933:262769..263038Clytia hemisphaericaexon
TCONS_00020228-exon-sc0000350-1510915933:260863..261155TCONS_00020228-exon-sc0000350-1510915933:260863..261155Clytia hemisphaericaexon
TCONS_00020228-exon-sc0000350-1510915933:259358..259450TCONS_00020228-exon-sc0000350-1510915933:259358..259450Clytia hemisphaericaexon
TCONS_00020228-exon-sc0000350-1510915933:258697..258834TCONS_00020228-exon-sc0000350-1510915933:258697..258834Clytia hemisphaericaexon
TCONS_00020228-exon-sc0000350-1510915933:258274..258450TCONS_00020228-exon-sc0000350-1510915933:258274..258450Clytia hemisphaericaexon
TCONS_00020228-exon-sc0000350-1510915933:257751..257997TCONS_00020228-exon-sc0000350-1510915933:257751..257997Clytia hemisphaericaexon
TCONS_00020228-exon-sc0000350-1510915933:257427..257540TCONS_00020228-exon-sc0000350-1510915933:257427..257540Clytia hemisphaericaexon
TCONS_00020228-exon-sc0000350-1510915933:254040..256219TCONS_00020228-exon-sc0000350-1510915933:254040..256219Clytia hemisphaericaexon
TCONS_00020228-exon-sc0000350-1491911889:265588..265714TCONS_00020228-exon-sc0000350-1491911889:265588..265714Clytia hemisphaericaexon
TCONS_00020228-exon-sc0000350-1491911889:262769..263038TCONS_00020228-exon-sc0000350-1491911889:262769..263038Clytia hemisphaericaexon
TCONS_00020228-exon-sc0000350-1491911889:260863..261155TCONS_00020228-exon-sc0000350-1491911889:260863..261155Clytia hemisphaericaexon
TCONS_00020228-exon-sc0000350-1491911889:259358..259450TCONS_00020228-exon-sc0000350-1491911889:259358..259450Clytia hemisphaericaexon
TCONS_00020228-exon-sc0000350-1491911889:258697..258834TCONS_00020228-exon-sc0000350-1491911889:258697..258834Clytia hemisphaericaexon
TCONS_00020228-exon-sc0000350-1491911889:258274..258450TCONS_00020228-exon-sc0000350-1491911889:258274..258450Clytia hemisphaericaexon
TCONS_00020228-exon-sc0000350-1491911889:257751..257997TCONS_00020228-exon-sc0000350-1491911889:257751..257997Clytia hemisphaericaexon
TCONS_00020228-exon-sc0000350-1491911889:257427..257540TCONS_00020228-exon-sc0000350-1491911889:257427..257540Clytia hemisphaericaexon
TCONS_00020228-exon-sc0000350-1491911889:254040..256219TCONS_00020228-exon-sc0000350-1491911889:254040..256219Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000350supercontigsc0000350:254040..265714 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	4.44329e-06	0	0	0	0	0	0	1.73965e-08	0	0	0	14.3166	10.8008	0.0644677	0	0.346257	3.63761	20.175	21.1738	8.1475	8.41179	3.13481	2.70136	0	2.54345e-05	0.726838	0.270444	0.00262689	0.00076853
Blast
[Close]
BLAST of TCONS_00020228 vs. Swiss-Prot (Human)
Match: TENS1 (Tensin-1 OS=Homo sapiens GN=TNS1 PE=1 SV=2)

HSP 1 Score: 254.218 bits (648), Expect = 1.062e-68
Identity = 126/286 (44.06%), Postives = 186/286 (65.03%), Query Frame = 3 
Query:  723 VKFDKDTVDLWYRPNITRDEATSLLRDAEPGSFLVRDSQTYDGAFGLAVKVDSPPASVLKQVDGDVSKIDLENELIRHFLIEPSKKGVRLKGSNEEPTFPSLVALIYQHSITKMALPITLLIPYKDSVDGGNPADNRLSKLSETQLLVKGAACDLLYLGGVKVDKLTGDGAVQYAMNKVASLSTQLKTTIVNIKVNQDGITLTDNNRRMFFRQHFQMANVLHCGVDPKSRQVNLKTFANREDKDVGCFGFVVENE-RKTEHQCYMFAELEQDQPASAVINFIHKAM 1577
            VKF +DT   WY+P I+R++A +LL+D EPG+F++RDS ++ GA+GLA+KV SPP ++++Q      K D+ +EL+RHFLIE   +GV+LKG   EP F SL AL+YQHSI  +ALP  L+IP +D  D     D+     S   LL +GAAC++L++  V ++ LTG  A+  A ++  +       TIV+ KV+  GITLTDN R++FFR+H+ +  V  C +DP+ R+  +KT      K    FGFV   +   T++ C++FAEL+ +QPASA++NF+ K M
Sbjct: 1453 VKFVQDTSKYWYKPEISREQAIALLKDQEPGAFIIRDSHSFRGAYGLAMKVSSPPPTIMQQNK----KGDMTHELVRHFLIETGPRGVKLKGCPNEPNFGSLSALVYQHSIIPLALPCKLVIPNRDPTDESK--DSSGPANSTADLLKQGAACNVLFVNSVDMESLTGPQAISKATSETLAADPTPAATIVHFKVSAQGITLTDNQRKLFFRRHYPLNTVTFCDLDPQERKW-MKTEGGAPAK---LFGFVARKQGSTTDNACHLFAELDPNQPASAIVNFVSKVM 1728
The following BLAST results are available for this feature:
BLAST of TCONS_00020228 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TENS11.062e-6844.06Tensin-1 OS=Homo sapiens GN=TNS1 PE=1 SV=2[more]
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