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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00020221 ID=TCONS_00020221|Name=TCONS_00020221|organism=Clytia hemisphaerica|type=transcript|length=749bp
TGTTTACTTTTTCGATTTCTGTTCGCTCATTGCTAGAAAAATGTTTAAAT
ATTTGTCTTTAGTTCAAGCTGAATTAAAGATTAGAAAAATAATTAGATTT
ATAAGGAATTTTCGAAACTATTTAATACTTTATACTTTAACTTCCTTTCT
TGCGaattcttttatatattttttcaaaacatcattAGCTCATATAACAT
CCACTCATAATGGCAAACAAACAAAGAGAAAGATAGTCGAAATATTAGAA
AAAGCTAACAACACAACAAAAAACACGCGCATTATACAGTagataaaaaa
acgttttatctcgcatattttttcatcaaagaagCGTTAAGTTTCAATCA
CTATACAGATCACAATGAGGTTTATTTACCCAACAAATATACTCTTTCTC
ATAGTGAACGTCTTATCATTGTATACTcaacttttttattattatttcct
TTCGCCATTTCTCTTTCTAAGCATATTTCTCGATTTTGTTTAATATTTCA
CTATACATCATCAAATAGAGTGAAATGTGTGCATGTTTCGTTCATCGTAA
TTAGCGTCCAGGccccttttctttttcatttgaacaGACGTTGATGTGTG
CATTAGCGAAGTGaagtgaattttcatttttgataaattattgGCTGATA
TATTAGTTATCATATGAAGAAATGGGCTGTCTCTGTCTTTTTGATACATA
TCTATCTTTAATCATTCTGTAGGCTAATTTatgttttctcaaaatcttg Run BLAST on NCBI transcript from alignment at sc0000350:232826..233648- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00020221 ID=TCONS_00020221|Name=TCONS_00020221|organism=Clytia hemisphaerica|type=transcript|length=823bp|location=Sequence derived from alignment at sc0000350:232826..233648- (Clytia hemisphaerica)
TGTTTACTTTTTCGATTTCTGTTCGCTCATTGCTAGAAAAATGTTTAAAT
ATTTGTCTTTAGTTCAAGCTGAATTAAAGATTAGAAAAATAATTAGATTT
ATAAGGAATTTTCGAAACTATTTAATACTTTATACTTTAACTTCCTTTCT
TGCGAATTCTTTTATATATTTTTTCAAAACATCATTAGCTCATATAACAT
CCACTCATAATGGCAAACAAACAAAGAGAAAGATAGTCGAAATATTAGAA
AAAGCTAACAACACAACAAAAAACACGCGCATTATACAGTAGATAAAAAA
ACGTTTTATCTCGCATATTTTTTCATCAAAGAAGCGTTAAGTTTCAATCA
CTATACAGATCACAATGAGGTTTATTTACCCAACAAATATACTCTTTCTC
ATAGTGAACGTCTTATCATTGTATACTCAACTTTTTTATTATTATTTCCT
TTCGCCATTTCTCTTTCTAAGCATATTTCTCGATTTTGTTTAATATTTCA
CTATACATCANGCATTGTATATTCAATTTTTTTTATTATTTCCTTTCGCC
ATTTCTCTTTCTAAGCATATTTTTCTATACATCATCAAATAGAGTGAAAT
GTGTGCATGTTTCGTTCATCGTAATTAGCGTCCAGGCCCCTTTTCTTTTT
CATTTGAACAGACGTTGATGTGTGCATTAGCGAAGTGAAGTGAATTTTCA
TTTTTGATAAATTATTGGCTGATATATTAGTTATCATATGAAGAAATGGG
CTGTCTCTGTCTTTTTGATACATATCTATCTTTAATCATTCTGTAGGCTA
ATTTATGTTTTCTCAAAATCTTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00020221-exon-sc0000350-1575043694:233143..233648 | TCONS_00020221-exon-sc0000350-1575043694:233143..233648 | Clytia hemisphaerica | exon |
| TCONS_00020221-exon-sc0000350-1575043694:232826..233068 | TCONS_00020221-exon-sc0000350-1575043694:232826..233068 | Clytia hemisphaerica | exon |
| TCONS_00020221-exon-sc0000350-1510915933:233143..233648 | TCONS_00020221-exon-sc0000350-1510915933:233143..233648 | Clytia hemisphaerica | exon |
| TCONS_00020221-exon-sc0000350-1510915933:232826..233068 | TCONS_00020221-exon-sc0000350-1510915933:232826..233068 | Clytia hemisphaerica | exon |
| TCONS_00020221-exon-sc0000350-1491911889:233143..233648 | TCONS_00020221-exon-sc0000350-1491911889:233143..233648 | Clytia hemisphaerica | exon |
| TCONS_00020221-exon-sc0000350-1491911889:232826..233068 | TCONS_00020221-exon-sc0000350-1491911889:232826..233068 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000350 | supercontig | sc0000350:232826..233648 - |
Blast
The following BLAST results are available for this feature:
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