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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00020192 ID=TCONS_00020192|Name=TCONS_00020192|organism=Clytia hemisphaerica|type=transcript|length=4462bp
tcagagtttaaaatgaaataaaaataaaaaatatcaacaaagcAAATACA
CTGACTGGAAACATCACCAGGATGATCAACAGTGGAGAAAGCCAGGTGAA
TGAAAACCACCACCAGCCAGGACACCAACCGAATCGAAATCTTCCAACGC
AAAATATACCTATTAATCCAGAGAGAGGAAACTCATTCCATCAAAATGGT
CCCGTGAGTATTATCAATAACAATACAACCTCAACACAACAATCATCTGC
AACCCCTTCCAGAACACCGGAAGCCACTTCTTCTCTCAAAAAACTCGGTC
GTAAAAAGAAGCTGGAAAGTCCAGCACTGATGACACATCCTGTCATGGTG
CCATCATCTGCAAACAACAGCCACGTCATCGTCAAAAACCGCTTCAAACA
CATCAAACCTACTTCAATCGTTGGTACCACTGTCACTGCAAATAGTGTAG
AACCGAAACCGAAGAATGCACTTCAAGCATTGGCAGAGTCATACGTAGAC
GAGCCACCTGCCAAACAAATGCGTACAGAATCTCCTTCAACAAGCACGCT
ACAAAGCTTACAacaaaaagtgaaatctcaACAAATTATCTTACAGCATG
CTACTGCTACCGCACAGCGTCAACGTCTCTTACAGCAAACCACACCAGCC
GTCTCATTGACTATATGCCCGAACTGTCGTCGACCCGACACGTTGTCAGT
AGATAAAGGAACAGTAAAATGTAACAATTGCAATCGCTCTTACGTCTCTC
TAAACAACACAACAGTTAGTATGCTACCACAAACATTCTACTCACCAACT
CCTCACTCGGTAGTCTCTCAACGGTTAGCAGCCACTAACTCATCTTCACC
TTCTAAGAATTTGAGGGGTGCAAAGAAACCAACGGAAACGATCGATTTGA
TTTCAAGTGACgaagaagaagaggaagaagaatCAGATGAATCAACCAAT
AAGAACGACGAACATTCTTCTACTACACAAACAAGAGACAACACTACCGT
TTCATGTAATAATACCGAAGCAACAACTTCAACCAACTCGACAACAGTTA
GAAAAACAGACCAGATGAGACTCAAGGGAGGAGAAATTCCCAACAATAAT
AACACTGGGAACGCCACATCCGCCGACAGATCAGCATCCACCCCTAGTCC
TTCACCCGCACAAAATACCACAAATAAGTATATTTTTAACAGTGAGAACG
CTATGTTTGGTGAACTTTACGGCAAAGCAGTGATGCCAATCAAAGTGACT
GATAACCGAATGTACTTATCTCTCGAATGTCATATTTACAGAGATAACGT
TGCTACAACAGAGAAATATACACTCTCAGTAGGCTCCAATGATGTCAGTC
AAGTTTATGTTTATTTTGGAAGGGTGCCATCTTTTGTCGCTATAGAAACA
GCCAGGAAGTTTGCTACTGTCGCGTGTAAGAGGATTGGTAAAGAAGTATT
GTGCCCAGGCTCCAGTATCCCAGAGAGACGTTATATTATTCTCGCTTTGA
AAAACGCTTTTAAAAATGACGCGGAAGCAGATTTGGAGCGACAGAATTTG
ATTGCTGCTGTAACACCGTGGGCTAGAGTTGAGTTGCTTTCTCATGCCGA
TGCTATACAGTTAATCAGTCAAGCTAAACTAGAAGTCAACCAAACGGAGG
TTTGCTACGGCAACGCGGCCAAGTTGAACGGCCCGATCGAAACCATCCTA
GTTTATCCGTCATCTTTGAAATCCGGGGGTATTCCCATCACCAACCTCGA
TGTCGAATGTTTAGATGAGGGAACCTATTTAAATGATATTATCATCGATT
TCTATTTGAAATATATTTGTGAGACACTAATGACTCCCGAACAACGCGAG
AAAACGTATATATTCAACTCGTATTTTTACAAACGTTTGACACAGAAGGC
ATCCAACAAAACGGATCCCGCTCAGATCCACGCTCAAGTGAAAAAATGGA
CACGTAACGtagacatttttcaaaaagattacatcatcaTACCCATTAAT
GAGCATTGTCATTGGTACCTAGCCATTGTTTGTTTTCACGGCCGTCAACC
GGTTCATTTGGAGAATGCGGAAAATGACGAAGAAGAAGACGATGATCAAA
TCGAAAATAGCTTTTTGATGCAAAAGACGACCGGTACCGAAGGGATGGAA
GGAAGCGAGGACGAGGAAGCACCACAAATCGCTAACTCCCCAGATCCTTC
CTCAGATGCTGACGCTGCAGTTTCAACGACAAATCAGAACACAGATCAAT
CATCCGATCAATTATCGACGAATCCTCTCCCGGTTAACGCCTTAGCTACT
CTACCTTCTGAGGATCTACAAAACGCACCAATGCTTCCGCCTGCTGACGC
CTCCACCGCAAACGGTGCGATAAACCCTGTCCTAACGCCCGCCAATGGTG
TTGAACCGCCCAAAGTTGTGAAAGAAGTTCCAAAACAAGCTTATGATCTT
GAGCCGTTCGAGCGTCCTTGTATTCTCATCTTTGATTCGTTAGTTGGAAG
TGGGCACTCTCGTGTATTCACAAACCTCCGTAATTATCTGTCACAAGAAT
GGCTTAGCAGAAAGTCATCTTTAGAACCAAAAGTGTTCAATAAAGACACA
ATGAAGGGTTGTTATCCTAAGATCCCACGTCAAAACAATGACTGCGATTG
TGGTGTGTTCCTTCTACAATACGCCGAGTTCTTTTTCTCCAAACCGATAC
GTAGTTTTCGTATGCCGGTCAATTTGCAGACTTGGTTTACCGTACAGTCG
GTTACACAAAAGAGAACTGACATTAAGACTCTGATACACAAACTAGCTGA
AGATTACCAACATTCAATAACTGAACTGAAAGCATCAAAACccaaaacaa
agaagaaaactGTACCTTCTTCTTCATCCACTACTTAAACTGTATTTATA
TTGTTTCGAGTTGTTTACCCACATTTTTATCTTCATATACTTTAGCTCAG
gttagttttttattttcttatttgaaatgTTGACATTGATGTGATGTGAT
GACCAATCAGCTTAACTGTAGGATGGCTATACTTTAACATTCCCAGGGAA
AGATTCTTGGCGCATTTCTAGGTtctttccgttgtttttttccGGGCATA
CCGGATTTTTTTGCTGCATACAAAACCGCAGACTAACCGCTTAACAAATT
GAAGATACTTTTGGACCTACTTAGAGTGCGGGTCTTTTTCTGTTGGCAAA
ATGAAAATGGGGAAGGAGAAAGTTTAGCTATCCTAGGGTATATAAACCCT
GGAGGTAGTTTGTCAAACCGGCTAACCAAATATCTGAcctgtattttttt
taaagtggtgaCCTTAAAGTTTACTAAGTGCTCAACAATGTGGGTGTAAA
TGCACCGAGAGTGTTAGATCTATTTCTCCTAGGATACTGATGATGTTGCG
CCGTTGGACGTTAAAGTTTTAACATTGCTATGGTTTGTTTACggttacca
ttttcaaaaaaaaatcacgtcAATGATGGTGGATAGGATTTATAGAGGCC
AGCGGTCTTACTTTCACACAATATGAAAGAACTTAATggtggtcaaaaaa
tcttttttgaatgaCTTTTTCCGAATAAGAATCGTATTTAGATGCCTAAA
TTGTCAATAAATAGAGCTTCACGCCCGATTTAGTTTCGTGAATTTAGGTT
TTGGTAGGtttatttttatctttaccTTTCTTTTGTCCTGTTTTACTTAC
TCTTTAACGGTTTATTAGCGCGGTCACCACGAGTCTACCATTGTTATATc
cttttttaaacttgaaatgctaatgccCTTGTCCCAATCTATGAATgata
aaaacacccccttctcacagacccggtaggatttttttagccagtgggga
aaaaataacagactgaaactcgatggggatttatATTCCCAATTTTTTAT
GACCAGGGATTTGaattctttgttttcaagtcaattttcaagttttcaag
ttgttttcagtggtttatTTAAcaattttcagcggggacaaaaattggag
tataattttccaccggggacaatcttttggccaatttttccagtgtgaag
ggttcccagtgggtctgtaagAAGTAGCAgtataaaaagttttgaataat
AATACATACGTTTTGTCTTTGCTTTGACATTGAATCAAGTAATATGCCTT
TTCTAAAAGTACTAATAATGTTTTATTTTCCTAGGCCCGGGCTGATCCCA
CTATATATCGGTGTGCCGGGTAAATCAATAGGAGACCTTAGATAGGGTCC
AAAGAAAGGTTGCTGCCAAACTTTGCATTTCCGTTATTCAACGGTACTAG
CATTTTTCGTAGTAGAGTGGTGCCTTGCCTTCTAGGCTACTATTtgactt
gttttttttctcttgtttCCAAGGATTTTAGAAAgaagatttatttttat
tgattagTATATTACTTGAGAGAgttttttatcgaaaaagaagtTTCTTT
ACATTACCTGAC Run BLAST on NCBI transcript from alignment at sc0000350:484441..490864+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00020192 ID=TCONS_00020192|Name=TCONS_00020192|organism=Clytia hemisphaerica|type=transcript|length=6424bp|location=Sequence derived from alignment at sc0000350:484441..490864+ (Clytia hemisphaerica)
tcagagtttaaaatgaaataaaaataaaaaatatcaacaaagcAAATACA
CTGACTGGAAACATCACCAGGATGATCAACAGTGGAGAAAGCCAGGTAAG
GCAATCTGTCAATTGAAATTATATCACTCAGGCAAGTTACGGCCTGTGCA
AAGAATTCGATAAATCGTGACGGCCGTGACGGCCAGTTGTTCCACCCCTT
TTTATGGGGaaatttttcgttatttttacttttcatattaatacctttct
aaaaagtcctgggccaaaaattctgtttcagccattttgggaaatttaaa
gcaaaacactttttgctgacgtcagcaaaaattagaAATACTAATATCTC
CTGGAATATTTATTGAAATGAGGTCAAATTTTGTGCAAAGGTAGGGttta
taaatatctttcattcccaaaaaaatttttttcaaaagattgatgacgtc
agcaaaaatcagcaattttcatttttcctaacaaaatgctgacgtcatca
gttttttggaaaatttttttttggaaatagaaGATATTTATAAACTCTAC
CTTcgtaccaaatttcagttcatttggATAAATATTTCAGGAGTTATtag
caatttaaatttttgctgacgtcagcaaaaagtgtttttccttAATGGCT
GAAACAGATttttggcccaggactttttggaaaggtatcaatatgatgAA
CATAACTCAGTAAAAATTTCTTCCAGAAAAGGGGTGGAACAACTGGCCGT
CACGAGTTTTATGATTTGTTGGATTTTTGTGTTGGCTGTCATGGAAATGA
CGgatatttttgacgtcaaaacttAAAATGCCATAATTCCTGAAATTNCG
TGTTGGTTGTCATGGAAATGACGGATATTTTTGACATCAAAACTTAAAAT
GCCAATaattcctgaaatttttatccaAATGAGCTCAAACTTTGCACATA
GGTAGTGTTCATGAATATCTTTGatttccaataaaaaaaatttcctataa
attgatgacgtcagcattttttgaggaaaaaagaaaattgctgatttttg
ctgacgtcatcacctttttgagaatttttttttttgaaacgagAGATATT
TACAAACCCTACCTTCGTACCAAATTTGAGTTCATTTGGATAAATATTCC
AATAGTTATTAGCagtttaaatttttgctgacgtcagcaaaaagtgtttt
tccttaattttatcaaaatggctgaaacacaatttttggcccaggacttt
ttgaAATGGCATTGATATGACGAgtgagaaaaaccaaaaatttttcccGA
AAAGGGGGTGGAACAACTGGCCGTCACGCATTATTTGATTCGTTAATTTT
TGCACAGGCCGTAACTTGCCTGAGCACTATTATTATTAGATCAATATTAT
ACACATGACGTTGGATGATTTAGGATTTTCATTTATAACCATCGAAAATC
CTTGCTATAGCATTACCTAGGATTTCAAAGATTTCAGCAccaaaaatttc
taaatcaaCTCTATTAATGGTTTGTGACatttgttcaaattttggtAGTC
TTTTCATAACTTGAACAATTCGATGATTATCGGCTCTTTTACTTTATTAT
GAATGAAATTTGATCAAGGAAACTTGAAACTCATTGTTTCTCAACCCTGT
ACTTTAGGGTAAAAGTTCAAGATTATGTCCTTTTTCAGGTGAATGAAAAC
CACCACCAGCCAGGACACCAACCGAATCGAAATCTTCCAACGCAAAATAT
ACCTATTAATCGTAagtgaaaaaaagatttataattcaatttttaattgg
TAATCATTCCTTCACCTATTGTACCTCTACAACTTGAATAGATCGGTAAA
TCCCATTGAACAAACTTGTCTTATAACAACAAAAATCCGTCCTGTCATTT
TTAATGCCTTGTTCACAACTACAGGaatcgaatgtttacattcgaaaaTA
CATTGAGTTTAAAACCTAGACGCACTCTTACGGGAATTTTTACAATCAGA
TGGTctatttaatgtttttaaatttttaagtattttaacTTTCATATCTA
TTTTTTTCCTAGCAGCAGAGAGAGGAAACTCATTCCATCAAAATGGTCCC
GTGAGTATTATCAATAACAATACAACCTCAACACAACAATCATCTGCAAC
CCCTTCCAGAACACCGGAAGCCACTTCTTCTCTCAAAAAACTCGGTCGTA
AAAAGAAGCTGGAAAGTCCAGCACTGATGACACATCCTGTCATGGTGCCA
TCATCTGCAAACAACAGCCACGTCATCGTCAAAAACCGCTTCAAACACAT
CAAACCTACTTCAATCGTTGGTACCACTGTCACTGCAAATAGTGTAGAAC
CGAAACCGAAGAATGCACTTCAAGCATTGGCAGAGTCATACGTAGACGAG
CCACCTGCCAAACAAATGCGTACAGAATCTCCTTCAACAAGCACGCTACA
AAGCTTACAacaaaaagtgaaatctcaACAAATTATCTTACAGCATGCTA
CTGCTACCGCACAGCGTCAACGTCTCTTACAGCAAACCACACCAGCCGTC
TCATTGACTATATGCCCGAACTGTCGTCGACCCGACACGTTGTCAGTAGA
TAAAGGAACAGTAAAATGTAACAATTGCAATCGCTCTTACGTCTCTCTAA
ACAACACAACAGTTAGTATGCTACCACAAACATTCTACTCACCAACTCCT
CACTCGGTAGTCTCTCAACGGTTAGCAGCCACTAACTCATCTTCACCTTC
TAAGAATTTGAGGGGTGCAAAGAAACCAACGGAAACGATCGATTTGATTT
CAAGTGACgaagaagaagaggaagaagaatCAGATGAATCAACCAATAAG
AACGACGAACATTCTTCTACTACACAAACAAGAGACAACACTACCGTTTC
ATGTAATAATACCGAAGCAACAACTTCAACCAACTCGACAACAGTTAGAA
AAACAGACCAGATGAGACTCAAGGGAGGAGAAATTCCCAACAATAATAAC
ACTGGGAACGCCACATCCGCCGACAGATCAGCATCCACCCCTAGTCCTTC
ACCCGCACAAAATACCACAAATAAGTATATTTTTAACAGTGAGAACGCTA
TGTTTGGTGAACTTTACGGCAAAGCAGTGATGCCAATCAAAGTGACTGAT
AACCGAATGTACTTATCTCTCGAATGTCATATTTACAGAGATAACGTTGC
TACAACAGAGAAATATACACTCTCAGTAGGCTCCAATGATGTCAGTCAAG
TTTATGTTTATTTTGGAAGGGTGCCATCTTTTGTCGCTATAGAAACAGCC
AGGAAGTTTGCTACTGTCGCGTGTAAGAGGATTGGTAAAGAAGTATTGTG
CCCAGGCTCCAGTATCCCAGAGAGACGTTATATTATTCTCGCTTTGAAAA
ACGCTTTTAAAAATGACGCGGAAGCAGATTTGGAGCGACAGAATTTGATT
GCTGCTGTAACACCGTGGGCTAGAGTTGAGTTGCTTTCTCATGCCGATGC
TATACAGTTAATCAGTCAAGCTAAACTAGAAGTCAACCAAACGGAGGTTT
GCTACGGCAACGCGGCCAAGTTGAACGGCCCGATCGAAACCATCCTAGTT
TATCCGTCATCTTTGAAATCCGGGGGTATTCCCATCACCAACCTCGATGT
CGAATGTTTAGATGAGGGAACCTATTTAAATGATATTATCATCGATTTCT
ATTTGAAATATATTTGTGAGACACTAATGACTCCCGAACAACGCGAGAAA
ACGTATATATTCAACTCGTATTTTTACAAACGTTTGACACAGAAGGCATC
CAACAAAACGGATCCCGCTCAGATCCACGCTCAAGTGAAAAAATGGACAC
GTAACGtagacatttttcaaaaagattacatcatcaTACCCATTAATGAG
CATTGTCATTGGTACCTAGCCATTGTTTGTTTTCACGGCCGTCAACCGGT
TCATTTGGAGAATGCGGAAAATGACGAAGAAGAAGACGATGATCAAATCG
AAAATAGCTTTTTGATGCAAAAGACGACCGGTACCGAAGGGATGGAAGGA
AGCGAGGACGAGGAAGCACCACAAATCGCTAACTCCCCAGATCCTTCCTC
AGATGCTGACGCTGCAGTTTCAACGACAAATCAGAACACAGATCAATCAT
CCGATCAATTATCGACGAATCCTCTCCCGGTTAACGCCTTAGCTACTCTA
CCTTCTGAGGATCTACAAAACGCACCAATGCTTCCGCCTGCTGACGCCTC
CACCGCAAACGGTGCGATAAACCCTGTCCTAACGCCCGCCAATGGTGTTG
AACCGCCCAAAGTTGTGAAAGAAGTTCCAAAACAAGCTTATGATCTTGAG
CCGTTCGAGCGTCCTTGTATTCTCATCTTTGATTCGTTAGTTGGAAGTGG
GCACTCTCGTGTATTCACAAACCTCCGTAATTATCTGTCACAAGAATGGC
TTAGCAGAAAGTCATCTTTAGAACCAAAAGTGTTCAATAAAGACACAATG
AAGGGTTGTTATCCTAAGATCCCACGTCAAAACAATGACTGCGATTGTGG
TGTGTTCCTTCTACAATACGCCGAGTTCTTTTTCTCCAAACCGATACGTA
GTTTTCGTATGCCGGTCAATTTGCAGACTTGGTTTACCGTACAGTCGGTT
ACACAAAAGAGAACTGACATTAAGACTCTGATACACAAACTAGCTGAAGA
TTACCAACATTCAATAACTGAACTGAAAGCATCAAAACccaaaacaaaga
agaaaactGTACCTTCTTCTTCATCCACTACTTAAACTGTATTTATATTG
TTTCGAGTTGTTTACCCACATTTTTATCTTCATATANTTCCACTACTTAA
ACTATATTTATATTGTTTCGAGTTGTTTATACACATTTTTATCTTCATAT
ACTTTAGCTCAGgttagttttttattttcttatttgaaatgTTGACATTG
ATGTGATGTGATGACCAATCAGCTTAACTGTAGGATGGCTATACTTTAAC
ATTCCCAGGGAAAGATTCTTGGCGCATTTCTAGGTtctttccgttgtttt
tttccGGGCATACCGGATTTTTTTGCTGCATACAAAACCGCAGACTAACC
GCTTAACAAATTGAAGATACTTTTGGACCTACTTAGAGTGCGGGTCTTTT
TCTGTTGGCAAAATGAAAATGGGGAAGGAGAAAGTTTAGCTATCCTAGGG
TATATAAACCCTGGAGGTAGTTTGTCAAACCGGCTAACCAAATATCTGAc
ctgtattttttttaaagtggtgaCCTTAAAGTTTACTAAGTGCTCAACAA
TGTGGGTGTAAATGCACCGAGAGTGTTAGATCTATTTCTCCTAGGATACT
GATGATGTTGCGCCGTTGGACGTTAAAGTTTTAACATTGCTATGGTTTGT
TTACggttaccattttcaaaaaaaaatcacgtcAATGATGGTGGATAGGA
TTTATAGAGGCCAGCGGTCTTACTTTCACACAATATGAAAGAACTTAATg
gtggtcaaaaaatcttttttgaatgaCTTTTTCCGAATAAGAATCGTATT
TAGATGCCTAAATTGTCAATAAATAGAGCTTCACGCCCGATTTAGTTTCG
TGAATTTAGGTTTTGGTAGGtttatttttatctttaccTTTCTTTTGTCC
TGTTTTACTTACTCTTTAACGGTTTATTAGCGCGGTCACCACGAGTCTAC
CATTGTTATATccttttttaaacttgaaatgctaatgccCTTGTCCCAAT
CTATGAATgataaaaacacccccttctcacagacccggtaggattttttt
agccagtggggaaaaaataacagactgaaactcgatggggatttatATTC
CCAATTTTTTATGACCAGGGATTTGaattctttgttttcaagtcaatttt
caagttttcaagttgttttcagtggtttatTTAAcaattttcagcgggga
caaaaattggagtataattttccaccggggacaatcttttggccaatttt
tccagtgtgaagggttcccagtgggtctgtaagAAGTAGCAgtataaaaa
gttttgaataatAATACATACGTTTTGTCTTTGCTTTGACATTGAATCAA
GTAATATGCCTTTTCTAAAAGTACTAATAATGTTTTATTTTCCTAGGCCC
GGGCTGATCCCACTATATATCGGTGTGCCGGGTAAATCAATAGGAGACCT
TAGATAGGGTCCAAAGAAAGGTTGCTGCCAAACTTTGCATTTCCGTTATT
CAACGGTACTAGCATTTTTCGTAGTAGAGTGGTGCCTTGCCTTCTAGGCT
ACTATTtgacttgttttttttctcttgtttCCAAGGATTTTAGAAAgaag
atttatttttattgattagTATATTACTTGAGAGAgttttttatcgaaaa
agaagtTTCTTTACATTACCTGAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00020192-exon-sc0000350-1491911889:484441..484535 | TCONS_00020192-exon-sc0000350-1491911889:484441..484535 | Clytia hemisphaerica | exon |
| TCONS_00020192-exon-sc0000350-1510915933:484441..484535 | TCONS_00020192-exon-sc0000350-1510915933:484441..484535 | Clytia hemisphaerica | exon |
| TCONS_00020192-exon-sc0000350-1575043694:484441..484535 | TCONS_00020192-exon-sc0000350-1575043694:484441..484535 | Clytia hemisphaerica | exon |
| TCONS_00020192-exon-sc0000350-1491911889:486129..486201 | TCONS_00020192-exon-sc0000350-1491911889:486129..486201 | Clytia hemisphaerica | exon |
| TCONS_00020192-exon-sc0000350-1510915933:486129..486201 | TCONS_00020192-exon-sc0000350-1510915933:486129..486201 | Clytia hemisphaerica | exon |
| TCONS_00020192-exon-sc0000350-1575043694:486129..486201 | TCONS_00020192-exon-sc0000350-1575043694:486129..486201 | Clytia hemisphaerica | exon |
| TCONS_00020192-exon-sc0000350-1491911889:486506..489259 | TCONS_00020192-exon-sc0000350-1491911889:486506..489259 | Clytia hemisphaerica | exon |
| TCONS_00020192-exon-sc0000350-1510915933:486506..489259 | TCONS_00020192-exon-sc0000350-1510915933:486506..489259 | Clytia hemisphaerica | exon |
| TCONS_00020192-exon-sc0000350-1575043694:486506..489259 | TCONS_00020192-exon-sc0000350-1575043694:486506..489259 | Clytia hemisphaerica | exon |
| TCONS_00020192-exon-sc0000350-1491911889:489325..490864 | TCONS_00020192-exon-sc0000350-1491911889:489325..490864 | Clytia hemisphaerica | exon |
| TCONS_00020192-exon-sc0000350-1510915933:489325..490864 | TCONS_00020192-exon-sc0000350-1510915933:489325..490864 | Clytia hemisphaerica | exon |
| TCONS_00020192-exon-sc0000350-1575043694:489325..490864 | TCONS_00020192-exon-sc0000350-1575043694:489325..490864 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000350 | supercontig | sc0000350:484441..490864 + |
Blast
BLAST of TCONS_00020192 vs. Swiss-Prot (Human)
Match: SENP6 (Sentrin-specific protease 6 OS=Homo sapiens GN=SENP6 PE=1 SV=2) HSP 1 Score: 147.517 bits (371), Expect = 1.502e-35 Identity = 70/163 (42.94%), Postives = 104/163 (63.80%), Query Frame = 3
Query: 1575 RVELLSHADAIQLISQAKLEVNQTEVCYG-NAAKLNGPIETILVYPSSLKSGGIPITNLDVECLDEGTYLNDIIIDFYLKYICETLMTPEQREKTYIFNSYFYKRLTQK------ASNKTDPAQIHAQVKKWTRNVDIFQKDYIIIPINEHCHWYLAIVCFHG 2042
+++ +S IQL S+ + + E G N GP+E ++VYP GGI +TN D+ CL+EG +LND+IIDFYLKY+ + E ++ +IF+S+FYKRL Q+ +N + + H +VK WTR+VDIF+KD+I +P+NE HW+LA+VCF G
Sbjct: 613 KIKTVSFESKIQLRSKQEFQFFDEEEETGENHTIFIGPVEKLIVYPPPPAKGGISVTNEDLHCLNEGEFLNDVIIDFYLKYLVLEKLKKEDADRIHIFSSFFYKRLNQRERRNHETTNLSIQQKRHGRVKTWTRHVDIFEKDFIFVPLNEAAHWFLAVVCFPG 775 HSP 2 Score: 118.627 bits (296), Expect = 1.087e-26 Identity = 57/115 (49.57%), Postives = 73/115 (63.48%), Query Frame = 3
Query: 2460 ERPCILIFDSLVGSGHSRVFTNLRNYLSQEWLSRKSSLEPKVFNKDTMKGCYPKIPRQNNDCDCGVFLLQYAEFFFSKPIRSFRMPVNLQTWFTVQSVTQKRTDIKTLIHKLAED 2804
++PCIL+ DSL G S V LR YL EW +K S + F+KD MKG PK+P+QNN DCGV++LQY E FF PI SF +P+NL WF + KR +I+ +I KL ED
Sbjct: 969 KQPCILLMDSLRGPSRSNVVKILREYLEVEWEVKKGS--KRSFSKDVMKGSNPKVPQQNNFSDCGVYVLQYVESFFENPILSFELPMNLANWFPPPRMRTKREEIRNIILKLQED 1081
The following BLAST results are available for this feature:
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