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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00020170 ID=TCONS_00020170|Name=TCONS_00020170|organism=Clytia hemisphaerica|type=transcript|length=1169bp
TTTTAAAAAGCATCTGATTAGACACGAACTCTAATTCGTTCAAGGAGGGT
TGgcttttcatcgaataagggaggcTATCAAATAGTAAAGCGgtgtttat
gagagtttcttgttgacggttaatttcaatattatcgaataatagagcgt
atagaatagtagaacgtcaaattagagagcgtcgcCTGTAGTTTCAGCAT
GAACTCTCCTGTTTTCATTTAATATCAGGTGCGGTAAGAATGTTCCCATC
CCAGGCTACCGGTTATTTTCACAATGTAATGCGGAAGGCCAATCACCATG
TTGCAATCTGAACACTGGATTATGCGGGAAAGGTGCAGAAAACTGTGATT
GTGAGAATTGTACGGACTTCCGGAAGATGATATCAGCGGAACTGGCCCAA
TGGCAACCACGGAAATGTCGGTTGAGAAGATTTCACTGGAAAGATTCATG
CTCGTTGATAAGTAGACAGAATATCTCACTCGTTTTCTTAGGTGATTCAT
TGATTCGACATTTACACACAGCCACCTTGCTTCATCTTACAAACGACCAC
GAAACAGGCGCTATTCCGCAGAACGCATCTGATAAAGAGCGCCAACGTTG
TTCCGGTGTCCTGCAAATTGTACAAAAAGAATGCAGCTTGGAGGTAGCTG
CTCAAAATGTAGACGAACTTCAATCAGATACCGTCTGTACAGGATTTACT
CCAAATAAATTCATTGTAGATTTAGTTCAAGATTATCATAGCGTTTTACT
ACAAAAAGTTCGAGACAAAATAAACTCGGTGTTAAACCAAGAAAATACGT
GGCTAATTTTAGGGGTCGGTTTACACTACCAACTAGAGATGGACTCGCTA
AAGCGAGAATATTTAGACAAAGTGTTTGAGATATTGAGTCATTCTGCTAA
TGGATGGCCAAAAGTGTTATGGATTGAGCTTCACGCTTTTTCGGGTTACA
TACGGCAAGTTGCGGGCCCAACaatgaagaaaattgaagattttaatGAA
CTTGTAGAAGAATATTTAGAGAAACGTGGCGCTAAAGTGATAAAGACGTT
TGCAATGACGAAAAATGTGAAGAGTTACGACGGACGACATCACGGGTTGG
GATTGAACCTTTTCAAAGTTGACTTGATCATGAATTACTTGGATCAATTT
TATCGAAAGAATCGGAAGA Run BLAST on NCBI transcript from alignment at sc0000350:293187..294599+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00020170 ID=TCONS_00020170|Name=TCONS_00020170|organism=Clytia hemisphaerica|type=transcript|length=1413bp|location=Sequence derived from alignment at sc0000350:293187..294599+ (Clytia hemisphaerica)
TTTTAAAAAGCATCTGATTAGACACGAACTCTAATTCGTTCAAGGAGGGT
TGgcttttcatcgaataagggaggcTATCAAATAGTAAAGCGgtgtttat
gagagtttcttgttgacggttaatttcaatattatcgaataatagagcgt
atagaatagtagaacgtcaaattagagagcgtcgcCTGTAGTTTCAGCAT
GAACTCTCCTGTTTTCATTTAATATCAGGTGCGGTAAGAATGTTCCCATC
CCAGGCTACCGGTTATTTTCACAATGTAATGCGGAAGGCCAATCACCATG
TTGCAATCTGAACACTGGATTATGCGGGAAAGGTGCAGAAAACTGTGATT
GTGAGAATTGTACGGACTTCCGGAAGATGATATCAGCGGAACTGGCCCAA
TGGCAACCACGGAAATGTCGGTTGAGAAGATTTCACTGGAAAGATTCATG
CTCGTTGATAAGTAGACAGAATATCTCACTCGTTTTCTTAGGTAAggaca
atttctttttcaaacctaaGGTAACTTGGAAAGTTTAATTATTGgtaaaa
aagaagtttcaatATGTATAGTTTCTATGTGTTCTCACTTTGACATCTCC
TCTACCGCAAAACCCTGATGTGACGATTTTCTAGGAAGCAATCAGGGCCA
AACATTGGTGGCTCTAGAGGTCAATGAACATTTTATACAGATAAGATTAC
TTCATCTCAATcccattttttcactttttcaccaGGTGATTCATTGATTC
GACATTTACACACAGCCACCTTGCTTCATCTTACAAACGACCACGAAACA
GGCGCTATTCCGCAGAACGCATCTGATAAAGAGCGCCAACGTTGTTCCGG
TGTCCTGCAAATTGTACAAAAAGAATGCAGCTTGGAGGTAGCTGCTCAAA
ATGTAGACGAACTTCAATCAGATACCGTCTGTACAGGATTTACTCCAAAT
AAATTCATTGTAGATTTAGTTCAAGATTATCATAGCGTTTTACTACAAAA
AGTTCGAGACAAAATAAACTCGGTGTTAAACCAAGAAAATACGTGGCTAA
TTTTAGGGGTCGGTTTACACTACCAACTAGAGATGGACTCGCTAAAGCGA
GAATATTTAGACAAAGTGTTTGAGATATTGAGTCATTCTGCTAATGGATG
GCCAAAAGTGTTATGGATTGAGCTTCACGCTTTTTCGGGTTACATACGGC
AAGTTGCGGGCCCAACaatgaagaaaattgaagattttaatGAACTTGTA
GAAGAATATTTAGAGAAACGTGGCGCTAAAGTGATAAAGACGTTTGCAAT
GACGAAAAATGTGAAGAGTTACGACGGACGACATCACGGGTTGGGATTGA
ACCTTTTCAAAGTTGACTTGATCATGAATTACTTGGATCAATTTTATCGA
AAGAATCGGAAGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00020170-exon-sc0000350-1491911889:293187..293677 | TCONS_00020170-exon-sc0000350-1491911889:293187..293677 | Clytia hemisphaerica | exon |
| TCONS_00020170-exon-sc0000350-1510915933:293187..293677 | TCONS_00020170-exon-sc0000350-1510915933:293187..293677 | Clytia hemisphaerica | exon |
| TCONS_00020170-exon-sc0000350-1575043694:293187..293677 | TCONS_00020170-exon-sc0000350-1575043694:293187..293677 | Clytia hemisphaerica | exon |
| TCONS_00020170-exon-sc0000350-1491911889:293922..294599 | TCONS_00020170-exon-sc0000350-1491911889:293922..294599 | Clytia hemisphaerica | exon |
| TCONS_00020170-exon-sc0000350-1510915933:293922..294599 | TCONS_00020170-exon-sc0000350-1510915933:293922..294599 | Clytia hemisphaerica | exon |
| TCONS_00020170-exon-sc0000350-1575043694:293922..294599 | TCONS_00020170-exon-sc0000350-1575043694:293922..294599 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000350 | supercontig | sc0000350:293187..294599 + |
Blast
The following BLAST results are available for this feature:
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