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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00020147 ID=TCONS_00020147|Name=TCONS_00020147|organism=Clytia hemisphaerica|type=transcript|length=1053bp
TGACTAAAGTGACAAAAATCTCATGACAAATTATTTCGCTCATAAGAGAA
AATAattcaagcattttttgagtttttttgaaaattttgagttattgCAA
TGCAAAGGAACAAACGAAATATattaatttcaaataatttagaTTTAATA
AACAATGATAATAAATCATTAATACAAAAAACGCCaccaaaaataccaaa
tttcatTAAACATGTTGCAAACAAATCAAAAAGAGGTTATATAACAAACA
TACATCATTaaatataaaattattttcacaCCTTTACACTATATACGCTG
TACAGGACTGATGCATCTCACACAGTAGTCAATATATATCTGAGCGTTGG
GCTGAAGTGACCGAAGAAAACTCGGTTGAGTCAATACACCTTTACGGATA
GTCGTCTCGCATAAAAtgtcaccaaaatttcgagtaaacaaaccatctca
ttggctgaaagcaaaaacataaacaaaaaaatgtccagagtaagagcaca
ttttgtttatgtttttgcttttagccaatgggatgatttgtttactcgaa
attttggtgactttttataagaaacggCTAACCGGAAAAAAGTGTATTCT
GGGATGTAGCCGCCGATTTCATAATGCGAGTATAATATAATGAAGTATGG
TTTGCAGTGCAAGTGCACCAAGTTCTGTTgaagttaaattttttaaatat
ctaaGTCTAGTCTAGGTAACCATTGCTAATACACAgttttttgatacttg
atacACGAACACTTTTATTGTCTAAAAGTTTAGGTAATTGTAAGGTAACA
AATAAGATGCAGTTTCACTCGAATAAACACcccacttggcaagtgaatgt
accttggcccgggtcaacccatactatgtgaggggaatagggtaccatca
ctctgatatAAGAGTATGGGGAGATATGCTGGGCATTGAATGTGGTGTGG
TGGTGGTACTTGTATGTTCAGTACCTGCGAGAACGCAAGGTTCTCCCGTA
CTGTGCgagtatcatcatcgatacagcacggctctgatgtgtcgcgagca
cag Run BLAST on NCBI transcript from alignment at sc0000349:204054..205106 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00020147 ID=TCONS_00020147|Name=TCONS_00020147|organism=Clytia hemisphaerica|type=transcript|length=1053bp|location=Sequence derived from alignment at sc0000349:204054..205106 (Clytia hemisphaerica)
ctgtgctcgcgacacatcagagccgtgctgtatcgatgatgatactcGCA
CAGTACGGGAGAACCTTGCGTTCTCGCAGGTACTGAACATACAAGTACCA
CCACCACACCACATTCAATGCCCAGCATATCTCCCCATACTCTTatatca
gagtgatggtaccctattcccctcacatagtatgggttgacccgggccaa
ggtacattcacttgccaagtgggGTGTTTATTCGAGTGAAACTGCATCTT
ATTTGTTACCTTACAATTACCTAAACTTTTAGACAATAAAAGTGTTCGTg
tatcaagtatcaaaaaacTGTGTATTAGCAATGGTTACCTAGACTAGACt
tagatatttaaaaaatttaacttcAACAGAACTTGGTGCACTTGCACTGC
AAACCATACTTCATTATATTATACTCGCATTATGAAATCGGCGGCTACAT
CCCAGAATACACTTTTTTCCGGTTAGccgtttcttataaaaagtcaccaa
aatttcgagtaaacaaatcatcccattggctaaaagcaaaaacataaaca
aaatgtgctcttactctggacatttttttgtttatgtttttgctttcagc
caatgagatggtttgtttactcgaaattttggtgacaTTTTATGCGAGAC
GACTATCCGTAAAGGTGTATTGACTCAACCGAGTTTTCTTCGGTCACTTC
AGCCCAACGCTCAGATATATATTGACTACTGTGTGAGATGCATCAGTCCT
GTACAGCGTATATAGTGTAAAGGtgtgaaaataattttatatttAATGAT
GTATGTTTGTTATATAACCTCTTTTTGATTTGTTTGCAACATGTTTAatg
aaatttggtatttttggtGGCGTTTTTTGTATTAATGATTTATTATCATT
GTTTATTAAAtctaaattatttgaaattaatATATTTCGTTTGTTCCTTT
GCATTGcaataactcaaaattttcaaaaaaactcaaaaaatgcttgaatT
ATTTTCTCTTATGAGCGAAATAATTTGTCATGAGATTTTTGTCACTTTAG
TCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00020147-exon-sc0000349-1491911889:204054..205106 | TCONS_00020147-exon-sc0000349-1491911889:204054..205106 | Clytia hemisphaerica | exon |
| TCONS_00020147-exon-sc0000349-1510915933:204054..205106 | TCONS_00020147-exon-sc0000349-1510915933:204054..205106 | Clytia hemisphaerica | exon |
| TCONS_00020147-exon-sc0000349-1575043694:204054..205106 | TCONS_00020147-exon-sc0000349-1575043694:204054..205106 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000349 | supercontig | sc0000349:204054..205106 . |
Blast
The following BLAST results are available for this feature:
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