TCONS_00020032 (transcript) - C. hemisphaerica

Overview
NameTCONS_00020032
Unique NameTCONS_00020032
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2273

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00020032 ID=TCONS_00020032|Name=TCONS_00020032|organism=Clytia hemisphaerica|type=transcript|length=2273bp
TAGAAATaaattgaaatcgaaagtggtttGCTTCGCAGTTTTCGCacaaa
tatttcagaaattcAACACCCACTTTTTCTGAccactttttcttttcctt
cttgTCATAAAACATGTCACATTCAGATTGTTCAGACTCAGAACCAGAAG
ACTTGGAACAATCAGTATCAATATCGAAAGGTAAGCTAGTTGTTAAGATG
GACcaaaccattaaaaagtctGAATCATCGGCTACCTCGACAAAGGAAGA
AGTTCCGATCAAAGATTGTCCTGTCAAAAATGTCACTGTATTTGTTGATC
GAGCTGAAGTCAACCGAATTGTTGATCTAAACCTTCAACAAGGAAATGTA
GAGGTCCTCTTAAAAGATCTTCCTGATTGTATGGACCAGGATTCTATGAG
agtgTCATGTTTTGGGGAAGCTACCATTGTGGAAGTAGCATACCAAGAAA
AGGCTGTCAAAGAAAATGGTGACGATTGTGACGACAGTGAACAGATCAAA
TCCAAAACTGAAGCTGAGAAGAAAAACATTAAAGGTTCAATTAAGACACT
AGAAGCAAACAAAGCAAAGCATGAACAACGAATTGAAGTCattaataaag
aaaaacttttgcTTCAAAATTATGCTGACTGCATCTCTTCAaaaaaagaa
gacaaagtTGGGGATGTTCTTGAGAAGAAAAGCATTGAGAATATGTTGAA
CTTTCTGGCAATATACGAAGAGCGTTCATCAAGGATACAAAACGAATTTT
CTGATCTCACccaaaagattgaagaaattgTCAAGGAAATAGGGATCTTG
AAGCAAAATCTTGTGAAATTGGAACCTAAAACACAAAAGACTAATATGCA
AAGaaatgtttcaattttactTGAAGTGAAGGAGGAAAGTAATGTGAATT
TGGTTGCATCGTATGTAGTTTCAAGGGCAAGTTGGAGGCCCTTTTATGAT
GTCAGAGCTTTCAACAAAGACAGTTCTGTTCAGATTTTGTATTTTGGTAT
GATCCGTCAGAACACAGGTGAAGATTGGGAAGATGCCAAGTTGTCTTTGA
GCACCGCCCTACCTAGTGTGGGTGGTAGTCCGCCCTCTCTTAAGCCTCAA
CTCTTGAAAGTGGCTACAGTACTCACTGCAAAGTCGGCTAAAAGACCTGC
TCTCAGTTTTCGAAGACATGTATCGAACAAAATAGTTGAACAAGAACTAC
AAGCTAAATATATAATCGCTAATTCGATGGAAAAGTCAATAGAGCTTTCC
GATTACAACTTTTCTCAAGCTCCCTTGCCGATTGCCGAGGCGACAGAAAA
TTTGACCAGTACCAATTTTGATATTCTGAGACCTTCCACTATCGAATCTG
ATGACGTAGAGCACAAAGTCTCCATCTGTCAATTGGACTTCTCCCCAGAA
TTTGAATATTTGGCCATTCCCAAGAGTGTGGCACATGCCTTTTTGAAGAT
CAAAGTGAAGAATGACAGCAATTATGCACTGTTGGCTGGCGATGCCAATG
TTTTTTTGGATAATAATTTCCTGACCAAgACCACATTATCAGCTGTTTCA
CCCATGGAAGAGTTTGACATTGCATTAGGTGTGGATCCATCAGTCAAAGT
CACCTACAAACCCGTCAAGAAGTTCCAGCAGCGAACTGGTATGATCTCCA
AAGCTGATTTGTTCAATTTCCATCAAGTCATCGAGATCAAGAATACAAAG
TCACTACCCGTCAAAATCAAAGTAACCGACCAATGTCCGTGGTCTACCAA
TGATAAAATTAAGATTACACTACAAGATCCGGACATAAAATTTCCAAAGG
GTAATTCATCGGATACATCCATCATCAAGAATGGGAATGCTTCATTGTAT
ACAAACAACAATACAATCGAATGGGAGTTAGAAGTGCCTTCTTCAGAAAC
CAAAACTATCAATTTGAAATATCAAGTTGAACATCCCATAGGTGTTCGTA
TCGAAGGACTTTGAAGGGATTTGAACGCAAAGACCATCGTATGACTTGTT
GAAGAAATGGACTTTTTAAGATGGACTAGGATTGAATAACATAAGCATCA
AATTTTCCCTTCGCTATATTCAGGAGGAATTCGACTAATAAGAGTATATA
GAGTATAATCACGACCCATGATATAcgtgtattttatttttgtgggggtt
tcgaaacttttttatgaaaattattaTTGAATTATGCAcaagataaatat
ttttattattaacATTCACATTATTTTACACATACCTAGTCCTAGTTGTG
AGgacgtgggggggggggggggg
Run BLAST on NCBI

transcript from alignment at sc0000348:94130..108390+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00020032 ID=TCONS_00020032|Name=TCONS_00020032|organism=Clytia hemisphaerica|type=transcript|length=14261bp|location=Sequence derived from alignment at sc0000348:94130..108390+ (Clytia hemisphaerica)
TAGAAATaaattgaaatcgaaagtggtttGCTTCGCAGTTTTCGCacaaa
tatttcagaaattcAACACCCACTTTTTCTGAccactttttcttttcctt
cttgTCATAAAACATGTCACATTCAGATTGTTCAGACTCAGAACCAGAAG
ACTTGGAACAATCAGTATCAATATCGAAAGGTAAGCTAGTTGTTAAGATG
GACcaaaccattaaaaagtctGAATCATCGGCTACCTCGACAAAGGAAGA
AGTTCCGATCAAAGATTGTCCTGTCAAAAATGTCACTGTATTTGTTGATC
GAGCTGAAGTCAACCGAATTGTTGATCTAAACCTTCAACAAGGAAATGTA
GAGGTCCTCTTAAAAGATCTTCCTGATTGTATGGACCAGGATTCTATGAG
GTATGAATAGTGTTTATCAAtttagtttttactttttttgtccaacagtc
aggattaaccgcctaaataggaacaaatttttcgatttcacaaatattcc
tatctaggatataggtacttatctaggaatattttttattctaagattAG
AATATTTTAGAAATTTTTATTTTACACTAAAACTAAAAAAAGTCGCATGT
ATCAATTATCATATATGTATTCATTTAGGTATTTTCTAACTGTGTTCCAA
ATTTCAGAAAGATTCATCAATGCAGTATTGAGTTATTGCATTTTAAAGTT
TCCAGGCAGATTCCATTGCTTATTAATGGTCTATTTACACATCAATTCCC
GTTTTTTGGTAAagagagccttaaaatgttcctatttaaGTATGTTTTAA
CAAATGCTAAGATTTTCCACCCTTCCACCCACCAAAAGTGCTGATTTTTG
GAAGAAGAAACCACTTTGTATTATTACATCTATTAGTCATAACTTGAACA
TGCGACTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNATGTTCCTAGCTTAGAATAAAAATT
ATTCCTAGATAAGTACCTATATCCTAGATAGGAATatttgtgaaatcgaa
aaatttgttcctatttaGGCGGTTAATCCTTCCAACCCTCACCAACAGTC
ACTAGTAGAATGATTTAATGATTCAACTGATTTagaatatttgtattttt
taactAAACAATGTTATTTGATACGTTAGAGTTCAGCTTGGGGGGAAAAA
CTGAGTTTTCATTTCAAGAAATGAAGTGCGAGTTATGTCATTGATGATGC
ACGCAAGCAATGatcaaaagaaaccaataaaagatcaaagagaaaTGCTA
TAAATGGCAAAAAATGATTGTTTGTCaatctttaaaatttgttaAACTCA
AAATTAAGTTAGCAAGTTTCATGAACTTCCCTatggtaccgtcaactgct
gtAACTTGTCCCAAGGTTGGTCGAAACATGGAACTGTTGATATCTGTACT
GTATTTCCTGTCTTACATTCTGGTAAAATATCCATCTATCCATCTATCTA
TGTATCTATTtttacttactgttaaatcactttgacaacaaatttgtttt
gatacttccaccaagtttatcaaccaCACTTCTTCTGTCATTCATCATAT
ATCACAAAAATAGATATCTCTAGAGAAAAGCTGCATCTGACAAAAAAAGT
AAACCATTCACGTCATCTTTTAATGTCTTGCTCTCTCAAGGGGCTTTTAT
CTAACAGCCCGTGCAATGAGATGAATATATGTCAGCAAGAGTCTGGTTTC
TATGATTTAGCTGATGTTAGTGGAAAAAAGAGCTGTGAGCGCATAGAAAC
CACACCCGCGTAAAGTTAACAGATCTGAAAATACGACGCaagttcattaa
ctcaaatcaaatgactttggagattCGGTGAAATGGTAGCCAAATTGCTG
TCCCACGTTTTATCAGATAGTCCCATGTTAGAGCAGTTGAccatatatat
gtgaagaaattcatagaatttctgtccaactatcttcattcaggagattt
gggtggcagagcagcttaccttattggaactaattttcgtgggaaCTAAA
ATTGCATTTAggaggttttaaattttttgttgttttgcccttttttaaca
aatttctttcattttcctatggatttttcaaaatgttcaataaaattgga
aaaattgcacggtttcaaatttttgtggtttttgcaaaatgctaaaattt
attcctgcaaaaattagttccgatAAGGTATGCATTttgtccttattagg
actcgtcagctcTGCATATTATTATGTTATTATTAtactattcatttttt
tctttagttctgtaacaattttcaagaatttttcagtttcttctaggttc
cccattgtattagagtaatcttttttttttgtaaggggttatccttacat
atatattcaattcaattcaattcaattcaattcatactgcaccctggcta
gAGATCAAATTGCCTAGTATCTCACTCCATAAAACTGATTGTGGCGCACA
TTGAAAGAAGAAGTGGACATAAGGGGAATTCTGTGAATGACTCCTCTgga
atttttatataaataagCTCTCATATTCTTTTAACGCCCCAGCTGACAAT
TAGGCTAAGCTAGACTTACCTCTTTTCTCTGTCCAATTCCAACAATACAA
TGCTTACATAGTTGACACATAATACACATTGACAGTATTCCCCATACaat
atttatatcaaaatctgcaataaaaacaaaagtggtctcttcttctCAGT
GGTTTCTGTAAGTTGCTCAATCAGAAGCCTTTTTTAgatttcaaccaatg
agattgTCGTATATGAAGACcaaccatttttgtttttattgcagATTTCC
ATATAAATATTGCATGGAGAATACTTCTGTTAATGTCTATTATGTGTCAA
CTATGTAAgcattttagccattttttaaatattctcttgtataatgaaat
tttaatatttttttttatatttattttattgtaaTTACAGAAGCCTTATT
TAtttagttatttatttttcttattccaTATTTGCGAGAATGGGTTTTGT
AAACCTTCTGTGAAttatcaaatagaaatagaaaaatagaaatagaaatt
gtATTGCTGGAATAGGAAAGAAAAAATTGGTATGTCTAGCCTAGCTTAAT
TGTCAGCTGTCAGGGTGCGTTAAATAAATATTAGAGGAAAGTAAAACACA
TGGTTTTTCCAAAGCTGCTTTTTGCCTTTCCTTCGGCCATCTTAAATTGT
ATGCAAAAAGATTATTGCAAATTTGCAGTGGTTAGATATTAtaggaaaat
atgcaaaacctatGCAAAAAGATATCataaatataaaacttacatgaata
attggcattatataaaagtgtaatcttgtagaaaaaagattgaattaatt
tctctttaaaactaGAAATATTTCGCTGATCTCTTAGAATAGTGgaagtg
caaaatagcgttttgagccgatttttctttattttgttatactttcttat
tctttcatagtatttttagcaggaaattatttttggacttattttgacat
aatttcaatggtttatagactagtttttgacaaattttaagaaaaaacat
aaatttttcgCCAATTTCTCCAAGATGGagtgcaaaattttttttcaaaa
gatttttgatttttttctattaatcCATTTCTATTCTAAAACCCTTTGCT
TTGTTGACagtaagtattttttttaaaaaggtaaaaacaCCACGgcggag
tgcaaactccagccttGTTTGTAATTTTGTCCAGGATGGACTTTTTAAGA
CCAaggtttccataatcagcataaaatttccgttccagcGATGTATAACA
ATCCCATTCACCTTCTGGGTTGAGCAAAGTTGTCTATAACTCGAGATTCT
GCTCCCAGACTAGAACAAGCACTCAAAAAACCAAAACAtcagacataaac
tcaagctgaaaaatcattaGCAAAGGTACAAGAATAATCcttatgctatg
tctttaagaacaaaattCTAGAAAGCTTTTGTggttttgtaaatatttct
tcttgaattaagaaattccatctttcatTGTTCTAATGagtataatattt
ctttataagatctttgtgtaaacttgtaTATGTTTGCATATTTctaacta
aatccaaccacagctTTATTTGATAAACTACCAcagctttttcgttcctg
tatttttgctaATAATTCAGTATGggggatggaaaggcgaaaaggtcgaT
TACCAAAATCAAATAGTCAAAGTGATATTTGCTTTATTCACCAGTCAGGC
AGTAATTCCAAATCTCTTCATTTTGCATCATCTTTGGGTAAAACAAGGGG
GTCAGTAGGTATTTTGGTAGATGGTAAAAATTTTagggattttcaaaatt
tggattgtCAATTAATGAATGGTGTAGTTGTAGTGGTAATTTAAGTGATT
ATTTCAAATAGTTTTTACTATCTCCCATTGCAACAACACAACACACCTTT
CCAGAAATGGCCTGGAAAATAAACACTCCACtgttcaggggggggggggg
gggaaaNCAGTGGTATAAAATATCACTCACCaaggttgggcgacgaagaa
aatgtTCGCCCTCTTAATGATGCATCTAAAAATTTCTAACTTGATTTTGA
AGAAACAACCTGCTACTTATTAGACTCATTGCAATACGATACAGTtgtta
ttttcaagtttttgtaccGTTATttctcagggggggggggtcgatagtaa
aatctcagacatatatgagtagtaaaaggatttttacgaatttttacata
caaccacccagactcttggaacaggtattttactaccctggtagtaaaag
tttttgggacaatttatcatggagaccacctattttttggttgcttttcg
gacttaTTTTACAACAAAGgctaaaaaattattatttctgcgacacattt
ttcacttattgcaaaatctaatgttttgcccttagaattaaaatcttttt
tatatcaacaaaaaatttcgagaattttttgtttgcagcaaacaactttc
caacagaaaattttttcaacttataaaaattttcagattttttcagaaaa
gtcatctaaaagaaatacaaaaatagctaaaatttgctaattttaccagt
tttaactacccaggtagtaaaaatatttcaaaatttaacacatagatacc
acccattttagtatttAACTACCCTGGGTtttttcgtcacaccaccaccg
tagtaaatgGTTaggtctgagattttactactgaccccccccctgcacTG
TTGTGTATAAATTATCTGGGACAACGCATTTTGGACTGCGAGGGGTTTGG
GAATGGAGGCTAAAACAACTTTTCTTTATAAGGAAAGCAGGCAAAAATGT
TTATCTCCATAGACCAAACAATGGAGAGTAAAAAAAATGTGTGCGCATCT
GTCTCGAAATACAGGTGTATCAGGGTGTATCAGTGAAATTGACTTCTTCC
ATGTTCAATACACATTCAATACATATcattttaatttgttgttctacggg
cagatcgttagcaaatatgggtcggtcggtcggtaaaataagaataaatt
ttcatttatcagggttggtaaagtaccgaaaatgttttccaaaaaaatat
ctggttcaaaaattcactttttttatcttcgatgaagatcataataaaat
cttagtgtatggagtgcttgattttctaaatctttcaatttcttgaatta
attttcagctttattcaaatttgattcttacaaataactagtgtgtaaaa
tatattgtagtggaaattcaatattattatttttttgactttttggcaaa
aatagggtcggtcgggcccgtagaacaacaaattaaattggtctcgcctt
atagGACTATTGTGAAGGGATCACAGTGTAAAGGTTGGGTCTACTGGAAC
AAACTATTCTCTGCTCTTAGTCTACCCATTAATTGAAATAGCTATATCCC
AGATATTTAAAACTGAAGTAAAattatttaacaaaaagaaCCTGCAGATT
TGAATAGAGGTCATCCGTTCTACATTTTGAGGTTAAATGAGTTTGACTTA
GTCATCgtttgattttggaaaaaccacgCGTGTGTTTATCCATACCGAAA
TTCCCAGATGTGAAAGACTTATATCCCAAGACttcaaagctttaaaaaaa
atcacaaactgaaaatttcaaaaatcgcaCACCGACAGAAAATTTCTGTG
CATTAATGATGGTTTTTACACGCGTtggatttattgattttttcctgtga
aagCATACTGTTTCACTACTCCTTAACatgggaaaacttttgttgtcaGA
AAAGATTCTAAAAAGAGAAGAAGTATTTGTGTATATATAAACATGTAAAT
ATAATGCCTGACAATAATGTAATAAGCTATttctatttactttttttttc
agagtgTCATGTTTTGGGGAAGCTACCATTGTGGAAGTAGCATACCAAGA
AAAGGCTGTCAAAGAAAATGGTGACGATTGTGACGACAGTGAACAGATCA
AATCCAAAACTGAAGCTGAGAAGAAAAACATTAAAGGTTCAATTAAGACA
CTAGAAGCAAACAAAGCAAAGCATGAACAACGAATTGAAGTCattaataa
agaaaaacttttgcTTCAAAATTATGCTGACTGCATCTCTTCAGTAATTa
ccttgtttatttatttttgcgaTCTTAGGTAGAGACAGTGAAATCAGATT
TTAAGACTTTCCTCTAGAAATACGAACATTTTGTTAGTTTGACTTCCTCG
GGAAATACATGAAGTTTTAACCATTTTGTCCTAAACAAATAAATAGATAA
TATAAGAAAGTATCAAATAAAGCGGACAATCAGCGGATAAACCTGAGatg
ttttggatttttcaaaaatgaacagAATAACCACAACTTtaccagaaaga
ggaaaaatatttttccaaaaccaGCACATCCTAAGATTTTCCTTGCGAAT
TTATAAATGAAATTAGCATGCTGAATTCAACAAATCTTCTTAATCTcaga
aaaaagaagacaaagtTGGGGATGTTCTTGAGAAGAAAAGCATTGAGAAT
ATGTTGAACTTTCTGGCAATATACGAAGAGCGTTCATCAAGGATACAAAA
CGAATTTTCTGATCTCACccaaaagattgaagaaattgTCAAGGAAATAG
GGATCTTGAAGCAAAATCTTGTGAAATTGGAACCTAAAACACAAAAGACT
AATATGCAAAGGTAAATAAATGGCTTTCATAggtcatttcacagtcgaaa
ttgatcatgggtaatcagaacTGATTGCGCCCCGATAACGGTTTCTCGTT
GGTTaaacgcaaaaatcttcaaactttttcaaaacattggaccaatagta
agtcgttattagcACGCAGTGGTcatgattacccattacgctttgcgact
gtggtCTATGAAACCTATTTCTTAGTATTACTATAGTAGTATTACTTCGA
CTTTGGGATTGATTGCACTAATAAGGTCCAGTCACCAGCCCATGTTCAGG
TTTATTACTTTTATTGATTGATGAAAATGTCTACTACACTCTGGCATAGT
TCTCGAAACCATTTTTGACCGTTGCCTGTACTTTTATTGATTCtagaaat
gtttcaattttactTGAAGTGAAGGAGGAAAGTAATGTGAATTTGGTTGC
ATCGTATGTAGTTTCAAGGGCAAGTTGGAGGCCCTTTTATGATGTCAGAG
CTTTCAACAAAGACAGTTCTGTTCAGGTAAAGTTACTGTGTTTTCACATT
GAGTGAGTGATTGAACATTTTCATATTAATTAAAAAAGAATCTTCTAAAT
CACAAACACTTTTGTCTTTGTgttgtttcattgttttatgGCTTCGAATT
TCTACGAATCCGCCAACATCAAACTCTTTAATGAAGtgttgttttgtatt
tttctttccaGATTTTGTATTTTGGTATGATCCGTCAGAACACAGGTGAA
GATTGGGAAGATGCCAAGTTGTCTTTGAGCACCGCCCTACCTAGTGTGGG
TGGTAGTCCGCCCTCTCTTAAGCCTCAACTCTTGAAAGTGGCTACAGTAC
TCACTGCAAAGTCGGCTAAAAGGTAAGTCATCTTTGACATTCCTGGAACG
GAAAATTCATCTAGAAACAACCTCACAAAATAACTTAATTACGCTTTACG
ATATAAACATTGCACAATCTTGATTAACTATACACCAACACTGATATGTA
ATAACAAATCGCACGCACTCCTCGCACAAACATATGCACAttatttcttt
caatctttcagAAGTACTTTCTCTAGAATTAAGAAATGTTTTGTCGTCGT
ATTTCTCCCATAGAGTTTATCAAGGACAACTTAAACTTTTCttcgattat
ttttttctaaagctttcaACTATATTTCTTAGTTTTCGTAGTAAGAAATT
AAGATATGCTGCTCCTGCTCCCCGTTCGAATGCTTTCGCCATGGACCAGT
ATGACCCGACCATAGAGGACTCATTCGAACTCGAACGATGTTCTTCTGCC
CGTGAATCGGCTTTGCCTTCAGCTGAGGtattttggaaaagaaaaaagcc
aaaaacaaCAAAGAGGAAATAGAACTAGactatttcattttcattgtctC
GTCTTTTGGCGAAACTAGCtaaaataaaagacaataaaTTATCAACTAAA
GTAAATCTTGAATCTACTTCCAAAGAACTTATCATGAATTTATTGTCTAG
CTTTAGAAAATCTAAACACATAAAAGGTTTCGGGAATCGGAATTTGCAAC
TGGAATCATTGGCTTTCGCAGAACCAGCACTCTACGCATGCGCTCTGAAC
GATTCAACTATCGAAGATTCAACTATCGAAGATTCTTACAGTGCTATGCC
TTATTCACTTGCTCCATCTGCTATGCCTACTGCTCAGGTTTGATTAAATA
CattcaaaaaaacaacaacaatgagGTGAAACAGACTACGAATTTTTTTA
ATACTCACGGAGCTATTTCGTAAATTAAAGCTACTCTTTTACGCAACGAT
ATCCTACAAGCAagtgaaagatcgaaagttgtttcgagatgtgaccctca
cattctattgcttttgtaaacaaaaaaatagcaaagttgatttgacaaat
tttgttgtttttactacatcagcatcatcaAATGGAAAATTAAGCTGAAA
GCAAAATgttgacaaaaaaacaatacaacatttttgtcaaatgatCCTGA
TATACTTTGTTAGATTGAAAAAAGGGAAGCCTCGACACACTGTTGATATT
AAAATCAGAGCATATATATATTACCGAACTTGATAAAGACAACCGTCGAA
ACGTCGTACACACTACTGTGTTTTTAATGTTCACTTTTAAGTTTTAGCAC
AAATAtacattattatccatatagcggtcattaagtaagtcattaaaggt
tcaatcggcgggcggtattgaaaggttttttgactcaaattgtcataccc
GTGCTGAGGAAAATAAAGTGCcaggcttcagagggctgaaatatcattaa
cggcccgggtatagggcaataacgtcatttgcggcccgctcggaattgaa
ttgaagtcgttgcattgaagcgaagagactaaactaacgtcagaaaaaac
actttttggtcatttgcggcccgctcacaaggtgctaaaaatttgttgaa
gacattgcattgaagcgaaaagaatttgttgacgctagaaaaaaacgttg
tttgaatatccgatatggataataatagtaatagcgttaagtttttgttc
gttgttgtcattaattctgcccttgcaatttgattattagccctctagtg
ccatttgcgccctccgcttcgcgtcgggcccaaatgacactatcgggcga
ataatcaaactacgcgggcagaaaataacaacaacgacctcaaactgaac
gctattgttatattgacTTTTACGTTCACTTATGTTATCGTTTGTATAGA
CCTGCTCTCAGTTTTCGAAGACATGTATCGAACAAAATAGTTGAACAAGA
ACTACAAGCTAAATATATAATCGCTAATTCGATGGAAAAGTCAATAGAGC
TTTCCGATTACAACTTTTCTCAAGCTCCCTTGCCGATTGCCGAGGTCAGT
AATCcttcaaagaaaacaaagaggAAACAGATAGGAATGAATGTTTcgtt
tttgaaatataattccCACCCATAAGTAACACcatgaataataaaaaaac
acataATGCACTTGAAAATACTCTTAAATCAAAAAGTGACGTTATCACGC
AATTCGCTGCTTGTTGAGAGACGAAAggtttcatctttttcatcatttga
aataaatagaacttttgatagttgctcTTGAGGATGTCAGTTTGTGCAGG
TTCATGGTATTTTTTCGACTTATCTACGTTCCACCTTTCTCGTTGACTAA
TCAATTTCATCCACCCTTCATCACCACACACACAAATCATTCCACAGCTG
GTAGTCGTCTTGTTTGTACCCAAATTGGACAAACATTTTTACCATCATAT
AATCTTTCGTATTTTTTTACAAATGGCTGTCAGTTATCAGAGCGTCTCAC
TTCATCAATTAAATTTCAACACCACCATTGCATTGTCCCGATTTCCATTT
CCATCGCGTTGTATTTTACAGAGGTTTTAGTTTTGGCGGTGGCGGTGGTG
GCGTTAAAAGGCGTTCTATGAAGATGAAGAGTTTCGGTGCCGGTGATAGT
GACAGTGACGAAGAAGAGTCGTTGTCATCATACATGTGTAGTGTTGGTGC
TCCTTCAGCTCTACCAACTGCCCAGGTACTTTGTTGTAACTCCAAGATAA
GGAGAAGAACAAGATAGAGGAAACAGACCAAAAGGCAACTGAATAATTGT
TTGTCTAAAGAGAACCGATGTTTGGGAGAGGGTTTGGGTATTAAGAGGTC
AAAGTCAACAATtcttaaagattttcaaaactaTGAGATAAAATATATCT
TTGACATGAATACTTTGGTCTACTGCCTTTTAGATAAATATCAACGTGAT
GGTGTTTGTATGATAAAACTTGAGTCAAACAGAATTCTAATTCTTtacat
aaaaaatgaattttagtaCAGAACACGAAATCTAAAGCAGCATAACGTAT
CATTAATAGAATTTtgaaagttattcaaaaaacaccaACTCCACAAAATT
TCAGACCTCCAGGGATACCAATCTGAAATGTTTTTGTCATGAAAGCTTGC
ATTATGATGGAAGTTATTGAGAAATCGAAAAAATTCGTCTGTTTTACGCA
AGATTCAAAACCAGTAAACAAAATTTGCCGTATTTAACTCtggaaaatta
tttattttaagaACGTCCACGAAGTTCAGTCCAAAATGGGAAATGTCGGA
GAACCCCATTTTCCGCTCTTCCCAACGTAATAAAAAATTCGATATGATTG
CTGCTCTTCTACCAAGTGCGCAGGTATTCATTTTGTGCTAAAAAAAATGA
TGATACACTTCGATCACAGAaaagaaatgtttcaaaaaacaTTGTATACA
GTACAGACGAGACAATAATAAATGTTCATTTGTTCTGTCTGTTTCctctt
tgttgttgttttctacttttatatttgttttttttcttcaactttACCAC
CCCCAACTCAAGCCTCCACTTagaactttcaattttgaatcGTCAACCTT
TTCACACAACATTTTCCATCCCAACCTTTTGAATATGATCTAGTTAACCC
CTGCATTTGTAATAACTCCCAAACTTATAACTTTAACCCATCCGTGAGAT
ATTTCACTTCATCATCCTTCCCCACCTACTAACAGGCGACAGAAAATTTG
ACCAGTACCAATTTTGATATTCTGAGACCTTCCACTATCGAATCTGATGA
CGTAGAGCACAAAGTCTCCATCTGTCAATTGGACTTCTCCCCAGAATTTG
AATATTTGGCCATTCCCAAGAGTGTGGCACATGCCTTTTTGAAGATCAAA
GTGAAGAATGACAGCAATTATGCACTGTTGGCTGGCGATGCCAATGTTTT
TTTGGATAATAATTTCCTGACCAAggtttgaaaataatattttggctCTT
TTGTACAAACTAAGCTACAATTAATTTCAagctttgttttctttcttaGC
CAGTGTGTTTCTACGACTATCATCGACCATAAAATGTTTTGTGTTCGTGT
CAGTTTTCATACAGttggctctctctaattcgattagGGGACCAAAAATG
ttcttcgaattaaagaaagattcgaattacagagagtattttgTATCACT
TTTCAGCTAAGGGGttaaatattttagttcgaattaaataaaaattcgaa
tagtagaggttcgacTAGAAAAAGTCTTCATATTCATTTTTGACATTCAT
TCATTTCATTTATCCTTTAGACCACATTATCAGCTGTTTCACCCATGGAA
GAGTTTGACATTGCATTAGGTGTGGATCCATCAGTCAAAGTCACCTACAA
ACCCGTCAAGAAGTTCCAGCAGCGAACTGGTATGATCTCCAAAGCTGATT
TGTTCAATTTCCATCAAGTCATCGAGATCAAGAATACAAAGTCACTACCC
GTCAAAATCAAAGTAACCGACCAATGTCCGTGGTCTACCAATGATAAAAT
TAAGGTACCCTTTTTGACACACTTTTATACTTAACTGCCTTCAATCAGTA
GCCGATCTTCGTAGTTTTGCATTACATTTAtgggtacctaataaacgggg
ttggaataagcgcgATGGAtggaaaaattctaaaaacttaattaataagc
gggggagggGGGCGGCTGGCATAAAAATgttctgggtggaaaatttttga
aagattaatTAGCGGGAggggacgcttattaggtacccgagagtatcttC
GTCGAGATTGTGCTTGTGTTACTATGTGTGCTACCGAAGTCGATTCCTTC
CTACATTTGGGGTCAATTGGGCTATTGCATAGAAAATTCATGAAAAGCCC
ATTGGTTTTTCAATTCATCGATCAGCAGAATGTGCGGAGACCATGGTCAA
AAATAAGCAGATTGGGGAAATTACCATTTGAGTCATTTTTTTAGATACTC
GAGTCCTTATAGTCTAAAGTCTCTATATTCTTTTACCATTTTGCCGTACT
AACGtcaaacaatccaaaagttccctAAACAATCGAATTAAAACATTTCC
GCTGAAAATTAAAACTTCCGAACAAATTGAGAGATGAACCAAGCTGGCCG
GATAAAAATTCAGTTTGTTTTTCAAAGTGGTTGTACCTTGTTTTACTATC
caaattgttattattttgcATGTTTGATTGTTTAGGGAACTTTTAGATTG
TTATGTGTAATATTAACCCCTTCAAACCCGacagacgtgtatacacgttt
tGAATTTGCCAAAATACCGAGTCTCAGATTTAAGAatataactcctgacc
acttgatttaaaagggcataaaccgaatacttttagaaagagtataaaat
ACATtaccaatggtaccaaaaccattgTCTTACTCCCAAGTTACaagctt
ttgaaattttggattaTAAAAAACCAGTtggaaattttcacatttttcaa
aaattgttgcgCGCTGGAAATGACAACATTCTGTATTTCAATCACTTTTA
GATTACACTACAAGATCCGGACATAAAATTTCCAAAGGGTAATTCATCGG
ATACATCCATCATCAAGAATGGGAATGCTTCATTGTATACAAACAACAAT
ACAATCGAATGGGAGTTAGAAGTGCCTTCTTCAGAAACCAAAACTATCAA
TTTGAAATATCAAGTTGAACATCCCATAGGTGTTCGTATCGAAGGACTTT
GAAGGGATTTGAACGCAAAGACCATCGTATGACTTGTTGAAGAAATGGAC
TTTTTAAGATGGACTAGGATTGAATAACATAAGCATCAAATTTTCCCTTC
GCTATATTCAGGAGGAATTCGACTAATAAGAGTATATAGAGTATAATCAC
GACCCATGATATAcgtgtattttatttttgtgggggtttcgaaacttttt
tatgaaaattattaTTGAATTATGCAcaagataaatatttttattattaa
cATTCACATTATTTTACACATACCTAGTCCTAGTTGTGAGgacgtggggg
ggggggggggg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_011259XLOC_011259Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00020032-exon-sc0000348-1491911889:94130..94529TCONS_00020032-exon-sc0000348-1491911889:94130..94529Clytia hemisphaericaexon
TCONS_00020032-exon-sc0000348-1510915933:94130..94529TCONS_00020032-exon-sc0000348-1510915933:94130..94529Clytia hemisphaericaexon
TCONS_00020032-exon-sc0000348-1575043694:94130..94529TCONS_00020032-exon-sc0000348-1575043694:94130..94529Clytia hemisphaericaexon
TCONS_00020032-exon-sc0000348-1491911889:100682..100922TCONS_00020032-exon-sc0000348-1491911889:100682..100922Clytia hemisphaericaexon
TCONS_00020032-exon-sc0000348-1510915933:100682..100922TCONS_00020032-exon-sc0000348-1510915933:100682..100922Clytia hemisphaericaexon
TCONS_00020032-exon-sc0000348-1575043694:100682..100922TCONS_00020032-exon-sc0000348-1575043694:100682..100922Clytia hemisphaericaexon
TCONS_00020032-exon-sc0000348-1491911889:101279..101490TCONS_00020032-exon-sc0000348-1491911889:101279..101490Clytia hemisphaericaexon
TCONS_00020032-exon-sc0000348-1510915933:101279..101490TCONS_00020032-exon-sc0000348-1510915933:101279..101490Clytia hemisphaericaexon
TCONS_00020032-exon-sc0000348-1575043694:101279..101490TCONS_00020032-exon-sc0000348-1575043694:101279..101490Clytia hemisphaericaexon
TCONS_00020032-exon-sc0000348-1491911889:101876..102005TCONS_00020032-exon-sc0000348-1491911889:101876..102005Clytia hemisphaericaexon
TCONS_00020032-exon-sc0000348-1510915933:101876..102005TCONS_00020032-exon-sc0000348-1510915933:101876..102005Clytia hemisphaericaexon
TCONS_00020032-exon-sc0000348-1575043694:101876..102005TCONS_00020032-exon-sc0000348-1575043694:101876..102005Clytia hemisphaericaexon
TCONS_00020032-exon-sc0000348-1491911889:102191..102351TCONS_00020032-exon-sc0000348-1491911889:102191..102351Clytia hemisphaericaexon
TCONS_00020032-exon-sc0000348-1510915933:102191..102351TCONS_00020032-exon-sc0000348-1510915933:102191..102351Clytia hemisphaericaexon
TCONS_00020032-exon-sc0000348-1575043694:102191..102351TCONS_00020032-exon-sc0000348-1575043694:102191..102351Clytia hemisphaericaexon
TCONS_00020032-exon-sc0000348-1491911889:104229..104373TCONS_00020032-exon-sc0000348-1491911889:104229..104373Clytia hemisphaericaexon
TCONS_00020032-exon-sc0000348-1510915933:104229..104373TCONS_00020032-exon-sc0000348-1510915933:104229..104373Clytia hemisphaericaexon
TCONS_00020032-exon-sc0000348-1575043694:104229..104373TCONS_00020032-exon-sc0000348-1575043694:104229..104373Clytia hemisphaericaexon
TCONS_00020032-exon-sc0000348-1491911889:106065..106304TCONS_00020032-exon-sc0000348-1491911889:106065..106304Clytia hemisphaericaexon
TCONS_00020032-exon-sc0000348-1510915933:106065..106304TCONS_00020032-exon-sc0000348-1510915933:106065..106304Clytia hemisphaericaexon
TCONS_00020032-exon-sc0000348-1575043694:106065..106304TCONS_00020032-exon-sc0000348-1575043694:106065..106304Clytia hemisphaericaexon
TCONS_00020032-exon-sc0000348-1491911889:106650..106883TCONS_00020032-exon-sc0000348-1491911889:106650..106883Clytia hemisphaericaexon
TCONS_00020032-exon-sc0000348-1510915933:106650..106883TCONS_00020032-exon-sc0000348-1510915933:106650..106883Clytia hemisphaericaexon
TCONS_00020032-exon-sc0000348-1575043694:106650..106883TCONS_00020032-exon-sc0000348-1575043694:106650..106883Clytia hemisphaericaexon
TCONS_00020032-exon-sc0000348-1491911889:107881..108390TCONS_00020032-exon-sc0000348-1491911889:107881..108390Clytia hemisphaericaexon
TCONS_00020032-exon-sc0000348-1510915933:107881..108390TCONS_00020032-exon-sc0000348-1510915933:107881..108390Clytia hemisphaericaexon
TCONS_00020032-exon-sc0000348-1575043694:107881..108390TCONS_00020032-exon-sc0000348-1575043694:107881..108390Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000348supercontigsc0000348:94130..108390 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.83387	4.7713	7.77955	9.04082	5.63994	5.85108	7.42581	5.08145	9.16083	8.28394	15.7701	4.14662	9.90257	6.72044	6.26333	5.7519	3.66154	3.80444	5.23078	7.97825	4.23487	5.65991	2.50063	3.95027	9.87598	6.19133	14.1521	16.0008	10.4645	10.9242
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00020032 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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