TCONS_00020031 (transcript) - C. hemisphaerica

Overview
NameTCONS_00020031
Unique NameTCONS_00020031
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2389

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00020031 ID=TCONS_00020031|Name=TCONS_00020031|organism=Clytia hemisphaerica|type=transcript|length=2389bp
cttaaaattgaaacattcaAAGTTGAATTCAATCACGAAATTTACGAATA
TTTGTGTTGTTGTATTTTACCCCCTTGATCTTATGTGTTACTATTTTTAG
AATCTCCTAGAAATaaattgaaatcgaaagtggtttGCTTCGCAGTTTTC
GCacaaatatttcagaaattcAACACCCACTTTTTCTGAccactttttct
tttccttcttgTCATAAAACATGTCACATTCAGATTGTTCAGACTCAGAA
CCAGAAGACTTGGAACAATCAGTATCAATATCGAAAGGTAAGCTAGTTGT
TAAGATGGACcaaaccattaaaaagtctGAATCATCGGCTACCTCGACAA
AGGAAGAAGTTCCGATCAAAGATTGTCCTGTCAAAAATGTCACTGTATTT
GTTGATCGAGCTGAAGTCAACCGAATTGTTGATCTAAACCTTCAACAAGG
AAATGTAGAGGTCCTCTTAAAAGATCTTCCTGATTGTATGGACCAGGATT
CTATGAGagtgTCATGTTTTGGGGAAGCTACCATTGTGGAAGTAGCATAC
CAAGAAAAGGCTGTCAAAGAAAATGGTGACGATTGTGACGACAGTGAACA
GATCAAATCCAAAACTGAAGCTGAGAAGAAAAACATTAAAGGTTCAATTA
AGACACTAGAAGCAAACAAAGCAAAGCATGAACAACGAATTGAAGTCatt
aataaagaaaaacttttgcTTCAAAATTATGCTGACTGCATCTCTTCAaa
aaaagaagacaaagtTGGGGATGTTCTTGAGAAGAAAAGCATTGAGAATA
TGTTGAACTTTCTGGCAATATACGAAGAGCGTTCATCAAGGATACAAAAC
GAATTTTCTGATCTCACccaaaagattgaagaaattgTCAAGGAAATAGG
GATCTTGAAGCAAAATCTTGTGAAATTGGAACCTAAAACACAAAAGACTA
ATATGCAAAGaaatgtttcaattttactTGAAGTGAAGGAGGAAAGTAAT
GTGAATTTGGTTGCATCGTATGTAGTTTCAAGGGCAAGTTGGAGGCCCTT
TTATGATGTCAGAGCTTTCAACAAAGACAGTTCTGTTCAGATTTTGTATT
TTGGTATGATCCGTCAGAACACAGGTGAAGATTGGGAAGATGCCAAGTTG
TCTTTGAGCACCGCCCTACCTAGTGTGGGTGGTAGTCCGCCCTCTCTTAA
GCCTCAACTCTTGAAAGTGGCTACAGTACTCACTGCAAAGTCGGCTAAAA
GAGGTTTTAGTTTTGGCGGTGGCGGTGGTGGCGTTAAAAGGCGTTCTATG
AAGATGAAGAGTTTCGGTGCCGGTGATAGTGACAGTGACGAAGAAGAGTC
GTTGTCATCATACATGTGTAGTGTTGGTGCTCCTTCAGCTCTACCAACTG
CCCAGGCGACAGAAAATTTGACCAGTACCAATTTTGATATTCTGAGACCT
TCCACTATCGAATCTGATGACGTAGAGCACAAAGTCTCCATCTGTCAATT
GGACTTCTCCCCAGAATTTGAATATTTGGCCATTCCCAAGAGTGTGGCAC
ATGCCTTTTTGAAGATCAAAGTGAAGAATGACAGCAATTATGCACTGTTG
GCTGGCGATGCCAATGTTTTTTTGGATAATAATTTCCTGACCAAgACCAC
ATTATCAGCTGTTTCACCCATGGAAGAGTTTGACATTGCATTAGGTGTGG
ATCCATCAGTCAAAGTCACCTACAAACCCGTCAAGAAGTTCCAGCAGCGA
ACTGGTATGATCTCCAAAGCTGATTTGTTCAATTTCCATCAAGTCATCGA
GATCAAGAATACAAAGTCACTACCCGTCAAAATCAAAGTAACCGACCAAT
GTCCGTGGTCTACCAATGATAAAATTAAGATTACACTACAAGATCCGGAC
ATAAAATTTCCAAAGGGTAATTCATCGGATACATCCATCATCAAGAATGG
GAATGCTTCATTGTATACAAACAACAATACAATCGAATGGGAGTTAGAAG
TGCCTTCTTCAGAAACCAAAACTATCAATTTGAAATATCAAGTTGAACAT
CCCATAGGTGTTCGTATCGAAGGACTTTGAAGGGATTTGAACGCAAAGAC
CATCGTATGACTTGTTGAAGAAATGGACTTTTTAAGATGGACTAGGATTG
AATAACATAAGCATCAAATTTTCCCTTCGCTATATTCAGGAGGAATTCGA
CTAATAAGAGTATATAGAGTATAATCACGACCCATGATATAcgtgtattt
tatttttgtgggggtttcgaaacttttttatgaaaattattaTTGAATTA
TGCAcaagataaatatttttattattaacATTCACATTATTTTACACATA
CCTAGTCCTAGTTGTGAGgacgtgggggggggggggggg
Run BLAST on NCBI

transcript from alignment at sc0000348:94023..108390+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00020031 ID=TCONS_00020031|Name=TCONS_00020031|organism=Clytia hemisphaerica|type=transcript|length=14368bp|location=Sequence derived from alignment at sc0000348:94023..108390+ (Clytia hemisphaerica)
cttaaaattgaaacattcaAAGTTGAATTCAATCACGAAATTTACGAATA
TTTGTGTTGTTGTATTTTACCCCCTTGATCTTATGTGTTACTATTTTTAG
AATCTCCTAGAAATaaattgaaatcgaaagtggtttGCTTCGCAGTTTTC
GCacaaatatttcagaaattcAACACCCACTTTTTCTGAccactttttct
tttccttcttgTCATAAAACATGTCACATTCAGATTGTTCAGACTCAGAA
CCAGAAGACTTGGAACAATCAGTATCAATATCGAAAGGTAAGCTAGTTGT
TAAGATGGACcaaaccattaaaaagtctGAATCATCGGCTACCTCGACAA
AGGAAGAAGTTCCGATCAAAGATTGTCCTGTCAAAAATGTCACTGTATTT
GTTGATCGAGCTGAAGTCAACCGAATTGTTGATCTAAACCTTCAACAAGG
AAATGTAGAGGTCCTCTTAAAAGATCTTCCTGATTGTATGGACCAGGATT
CTATGAGGTATGAATAGTGTTTATCAAtttagtttttactttttttgtcc
aacagtcaggattaaccgcctaaataggaacaaatttttcgatttcacaa
atattcctatctaggatataggtacttatctaggaatattttttattcta
agattAGAATATTTTAGAAATTTTTATTTTACACTAAAACTAAAAAAAGT
CGCATGTATCAATTATCATATATGTATTCATTTAGGTATTTTCTAACTGT
GTTCCAAATTTCAGAAAGATTCATCAATGCAGTATTGAGTTATTGCATTT
TAAAGTTTCCAGGCAGATTCCATTGCTTATTAATGGTCTATTTACACATC
AATTCCCGTTTTTTGGTAAagagagccttaaaatgttcctatttaaGTAT
GTTTTAACAAATGCTAAGATTTTCCACCCTTCCACCCACCAAAAGTGCTG
ATTTTTGGAAGAAGAAACCACTTTGTATTATTACATCTATTAGTCATAAC
TTGAACATGCGACTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGTTCCTAGCTTAGAAT
AAAAATTATTCCTAGATAAGTACCTATATCCTAGATAGGAATatttgtga
aatcgaaaaatttgttcctatttaGGCGGTTAATCCTTCCAACCCTCACC
AACAGTCACTAGTAGAATGATTTAATGATTCAACTGATTTagaatatttg
tattttttaactAAACAATGTTATTTGATACGTTAGAGTTCAGCTTGGGG
GGAAAAACTGAGTTTTCATTTCAAGAAATGAAGTGCGAGTTATGTCATTG
ATGATGCACGCAAGCAATGatcaaaagaaaccaataaaagatcaaagaga
aaTGCTATAAATGGCAAAAAATGATTGTTTGTCaatctttaaaatttgtt
aAACTCAAAATTAAGTTAGCAAGTTTCATGAACTTCCCTatggtaccgtc
aactgctgtAACTTGTCCCAAGGTTGGTCGAAACATGGAACTGTTGATAT
CTGTACTGTATTTCCTGTCTTACATTCTGGTAAAATATCCATCTATCCAT
CTATCTATGTATCTATTtttacttactgttaaatcactttgacaacaaat
ttgttttgatacttccaccaagtttatcaaccaCACTTCTTCTGTCATTC
ATCATATATCACAAAAATAGATATCTCTAGAGAAAAGCTGCATCTGACAA
AAAAAGTAAACCATTCACGTCATCTTTTAATGTCTTGCTCTCTCAAGGGG
CTTTTATCTAACAGCCCGTGCAATGAGATGAATATATGTCAGCAAGAGTC
TGGTTTCTATGATTTAGCTGATGTTAGTGGAAAAAAGAGCTGTGAGCGCA
TAGAAACCACACCCGCGTAAAGTTAACAGATCTGAAAATACGACGCaagt
tcattaactcaaatcaaatgactttggagattCGGTGAAATGGTAGCCAA
ATTGCTGTCCCACGTTTTATCAGATAGTCCCATGTTAGAGCAGTTGAcca
tatatatgtgaagaaattcatagaatttctgtccaactatcttcattcag
gagatttgggtggcagagcagcttaccttattggaactaattttcgtggg
aaCTAAAATTGCATTTAggaggttttaaattttttgttgttttgcccttt
tttaacaaatttctttcattttcctatggatttttcaaaatgttcaataa
aattggaaaaattgcacggtttcaaatttttgtggtttttgcaaaatgct
aaaatttattcctgcaaaaattagttccgatAAGGTATGCATTttgtcct
tattaggactcgtcagctcTGCATATTATTATGTTATTATTAtactattc
atttttttctttagttctgtaacaattttcaagaatttttcagtttcttc
taggttccccattgtattagagtaatcttttttttttgtaaggggttatc
cttacatatatattcaattcaattcaattcaattcaattcatactgcacc
ctggctagAGATCAAATTGCCTAGTATCTCACTCCATAAAACTGATTGTG
GCGCACATTGAAAGAAGAAGTGGACATAAGGGGAATTCTGTGAATGACTC
CTCTggaatttttatataaataagCTCTCATATTCTTTTAACGCCCCAGC
TGACAATTAGGCTAAGCTAGACTTACCTCTTTTCTCTGTCCAATTCCAAC
AATACAATGCTTACATAGTTGACACATAATACACATTGACAGTATTCCCC
ATACaatatttatatcaaaatctgcaataaaaacaaaagtggtctcttct
tctCAGTGGTTTCTGTAAGTTGCTCAATCAGAAGCCTTTTTTAgatttca
accaatgagattgTCGTATATGAAGACcaaccatttttgtttttattgca
gATTTCCATATAAATATTGCATGGAGAATACTTCTGTTAATGTCTATTAT
GTGTCAACTATGTAAgcattttagccattttttaaatattctcttgtata
atgaaattttaatatttttttttatatttattttattgtaaTTACAGAAG
CCTTATTTAtttagttatttatttttcttattccaTATTTGCGAGAATGG
GTTTTGTAAACCTTCTGTGAAttatcaaatagaaatagaaaaatagaaat
agaaattgtATTGCTGGAATAGGAAAGAAAAAATTGGTATGTCTAGCCTA
GCTTAATTGTCAGCTGTCAGGGTGCGTTAAATAAATATTAGAGGAAAGTA
AAACACATGGTTTTTCCAAAGCTGCTTTTTGCCTTTCCTTCGGCCATCTT
AAATTGTATGCAAAAAGATTATTGCAAATTTGCAGTGGTTAGATATTAta
ggaaaatatgcaaaacctatGCAAAAAGATATCataaatataaaacttac
atgaataattggcattatataaaagtgtaatcttgtagaaaaaagattga
attaatttctctttaaaactaGAAATATTTCGCTGATCTCTTAGAATAGT
Ggaagtgcaaaatagcgttttgagccgatttttctttattttgttatact
ttcttattctttcatagtatttttagcaggaaattatttttggacttatt
ttgacataatttcaatggtttatagactagtttttgacaaattttaagaa
aaaacataaatttttcgCCAATTTCTCCAAGATGGagtgcaaaatttttt
ttcaaaagatttttgatttttttctattaatcCATTTCTATTCTAAAACC
CTTTGCTTTGTTGACagtaagtattttttttaaaaaggtaaaaacaCCAC
GgcggagtgcaaactccagccttGTTTGTAATTTTGTCCAGGATGGACTT
TTTAAGACCAaggtttccataatcagcataaaatttccgttccagcGATG
TATAACAATCCCATTCACCTTCTGGGTTGAGCAAAGTTGTCTATAACTCG
AGATTCTGCTCCCAGACTAGAACAAGCACTCAAAAAACCAAAACAtcaga
cataaactcaagctgaaaaatcattaGCAAAGGTACAAGAATAATCctta
tgctatgtctttaagaacaaaattCTAGAAAGCTTTTGTggttttgtaaa
tatttcttcttgaattaagaaattccatctttcatTGTTCTAATGagtat
aatatttctttataagatctttgtgtaaacttgtaTATGTTTGCATATTT
ctaactaaatccaaccacagctTTATTTGATAAACTACCAcagctttttc
gttcctgtatttttgctaATAATTCAGTATGggggatggaaaggcgaaaa
ggtcgaTTACCAAAATCAAATAGTCAAAGTGATATTTGCTTTATTCACCA
GTCAGGCAGTAATTCCAAATCTCTTCATTTTGCATCATCTTTGGGTAAAA
CAAGGGGGTCAGTAGGTATTTTGGTAGATGGTAAAAATTTTagggatttt
caaaatttggattgtCAATTAATGAATGGTGTAGTTGTAGTGGTAATTTA
AGTGATTATTTCAAATAGTTTTTACTATCTCCCATTGCAACAACACAACA
CACCTTTCCAGAAATGGCCTGGAAAATAAACACTCCACtgttcagggggg
ggggggggggaaaNCAGTGGTATAAAATATCACTCACCaaggttgggcga
cgaagaaaatgtTCGCCCTCTTAATGATGCATCTAAAAATTTCTAACTTG
ATTTTGAAGAAACAACCTGCTACTTATTAGACTCATTGCAATACGATACA
GTtgttattttcaagtttttgtaccGTTATttctcagggggggggggtcg
atagtaaaatctcagacatatatgagtagtaaaaggatttttacgaattt
ttacatacaaccacccagactcttggaacaggtattttactaccctggta
gtaaaagtttttgggacaatttatcatggagaccacctattttttggttg
cttttcggacttaTTTTACAACAAAGgctaaaaaattattatttctgcga
cacatttttcacttattgcaaaatctaatgttttgcccttagaattaaaa
tcttttttatatcaacaaaaaatttcgagaattttttgtttgcagcaaac
aactttccaacagaaaattttttcaacttataaaaattttcagatttttt
cagaaaagtcatctaaaagaaatacaaaaatagctaaaatttgctaattt
taccagttttaactacccaggtagtaaaaatatttcaaaatttaacacat
agataccacccattttagtatttAACTACCCTGGGTtttttcgtcacacc
accaccgtagtaaatgGTTaggtctgagattttactactgaccccccccc
tgcacTGTTGTGTATAAATTATCTGGGACAACGCATTTTGGACTGCGAGG
GGTTTGGGAATGGAGGCTAAAACAACTTTTCTTTATAAGGAAAGCAGGCA
AAAATGTTTATCTCCATAGACCAAACAATGGAGAGTAAAAAAAATGTGTG
CGCATCTGTCTCGAAATACAGGTGTATCAGGGTGTATCAGTGAAATTGAC
TTCTTCCATGTTCAATACACATTCAATACATATcattttaatttgttgtt
ctacgggcagatcgttagcaaatatgggtcggtcggtcggtaaaataaga
ataaattttcatttatcagggttggtaaagtaccgaaaatgttttccaaa
aaaatatctggttcaaaaattcactttttttatcttcgatgaagatcata
ataaaatcttagtgtatggagtgcttgattttctaaatctttcaatttct
tgaattaattttcagctttattcaaatttgattcttacaaataactagtg
tgtaaaatatattgtagtggaaattcaatattattatttttttgactttt
tggcaaaaatagggtcggtcgggcccgtagaacaacaaattaaattggtc
tcgccttatagGACTATTGTGAAGGGATCACAGTGTAAAGGTTGGGTCTA
CTGGAACAAACTATTCTCTGCTCTTAGTCTACCCATTAATTGAAATAGCT
ATATCCCAGATATTTAAAACTGAAGTAAAattatttaacaaaaagaaCCT
GCAGATTTGAATAGAGGTCATCCGTTCTACATTTTGAGGTTAAATGAGTT
TGACTTAGTCATCgtttgattttggaaaaaccacgCGTGTGTTTATCCAT
ACCGAAATTCCCAGATGTGAAAGACTTATATCCCAAGACttcaaagcttt
aaaaaaaatcacaaactgaaaatttcaaaaatcgcaCACCGACAGAAAAT
TTCTGTGCATTAATGATGGTTTTTACACGCGTtggatttattgatttttt
cctgtgaaagCATACTGTTTCACTACTCCTTAACatgggaaaacttttgt
tgtcaGAAAAGATTCTAAAAAGAGAAGAAGTATTTGTGTATATATAAACA
TGTAAATATAATGCCTGACAATAATGTAATAAGCTATttctatttacttt
ttttttcagagtgTCATGTTTTGGGGAAGCTACCATTGTGGAAGTAGCAT
ACCAAGAAAAGGCTGTCAAAGAAAATGGTGACGATTGTGACGACAGTGAA
CAGATCAAATCCAAAACTGAAGCTGAGAAGAAAAACATTAAAGGTTCAAT
TAAGACACTAGAAGCAAACAAAGCAAAGCATGAACAACGAATTGAAGTCa
ttaataaagaaaaacttttgcTTCAAAATTATGCTGACTGCATCTCTTCA
GTAATTaccttgtttatttatttttgcgaTCTTAGGTAGAGACAGTGAAA
TCAGATTTTAAGACTTTCCTCTAGAAATACGAACATTTTGTTAGTTTGAC
TTCCTCGGGAAATACATGAAGTTTTAACCATTTTGTCCTAAACAAATAAA
TAGATAATATAAGAAAGTATCAAATAAAGCGGACAATCAGCGGATAAACC
TGAGatgttttggatttttcaaaaatgaacagAATAACCACAACTTtacc
agaaagaggaaaaatatttttccaaaaccaGCACATCCTAAGATTTTCCT
TGCGAATTTATAAATGAAATTAGCATGCTGAATTCAACAAATCTTCTTAA
TCTcagaaaaaagaagacaaagtTGGGGATGTTCTTGAGAAGAAAAGCAT
TGAGAATATGTTGAACTTTCTGGCAATATACGAAGAGCGTTCATCAAGGA
TACAAAACGAATTTTCTGATCTCACccaaaagattgaagaaattgTCAAG
GAAATAGGGATCTTGAAGCAAAATCTTGTGAAATTGGAACCTAAAACACA
AAAGACTAATATGCAAAGGTAAATAAATGGCTTTCATAggtcatttcaca
gtcgaaattgatcatgggtaatcagaacTGATTGCGCCCCGATAACGGTT
TCTCGTTGGTTaaacgcaaaaatcttcaaactttttcaaaacattggacc
aatagtaagtcgttattagcACGCAGTGGTcatgattacccattacgctt
tgcgactgtggtCTATGAAACCTATTTCTTAGTATTACTATAGTAGTATT
ACTTCGACTTTGGGATTGATTGCACTAATAAGGTCCAGTCACCAGCCCAT
GTTCAGGTTTATTACTTTTATTGATTGATGAAAATGTCTACTACACTCTG
GCATAGTTCTCGAAACCATTTTTGACCGTTGCCTGTACTTTTATTGATTC
tagaaatgtttcaattttactTGAAGTGAAGGAGGAAAGTAATGTGAATT
TGGTTGCATCGTATGTAGTTTCAAGGGCAAGTTGGAGGCCCTTTTATGAT
GTCAGAGCTTTCAACAAAGACAGTTCTGTTCAGGTAAAGTTACTGTGTTT
TCACATTGAGTGAGTGATTGAACATTTTCATATTAATTAAAAAAGAATCT
TCTAAATCACAAACACTTTTGTCTTTGTgttgtttcattgttttatgGCT
TCGAATTTCTACGAATCCGCCAACATCAAACTCTTTAATGAAGtgttgtt
ttgtatttttctttccaGATTTTGTATTTTGGTATGATCCGTCAGAACAC
AGGTGAAGATTGGGAAGATGCCAAGTTGTCTTTGAGCACCGCCCTACCTA
GTGTGGGTGGTAGTCCGCCCTCTCTTAAGCCTCAACTCTTGAAAGTGGCT
ACAGTACTCACTGCAAAGTCGGCTAAAAGGTAAGTCATCTTTGACATTCC
TGGAACGGAAAATTCATCTAGAAACAACCTCACAAAATAACTTAATTACG
CTTTACGATATAAACATTGCACAATCTTGATTAACTATACACCAACACTG
ATATGTAATAACAAATCGCACGCACTCCTCGCACAAACATATGCACAtta
tttctttcaatctttcagAAGTACTTTCTCTAGAATTAAGAAATGTTTTG
TCGTCGTATTTCTCCCATAGAGTTTATCAAGGACAACTTAAACTTTTCtt
cgattatttttttctaaagctttcaACTATATTTCTTAGTTTTCGTAGTA
AGAAATTAAGATATGCTGCTCCTGCTCCCCGTTCGAATGCTTTCGCCATG
GACCAGTATGACCCGACCATAGAGGACTCATTCGAACTCGAACGATGTTC
TTCTGCCCGTGAATCGGCTTTGCCTTCAGCTGAGGtattttggaaaagaa
aaaagccaaaaacaaCAAAGAGGAAATAGAACTAGactatttcattttca
ttgtctCGTCTTTTGGCGAAACTAGCtaaaataaaagacaataaaTTATC
AACTAAAGTAAATCTTGAATCTACTTCCAAAGAACTTATCATGAATTTAT
TGTCTAGCTTTAGAAAATCTAAACACATAAAAGGTTTCGGGAATCGGAAT
TTGCAACTGGAATCATTGGCTTTCGCAGAACCAGCACTCTACGCATGCGC
TCTGAACGATTCAACTATCGAAGATTCAACTATCGAAGATTCTTACAGTG
CTATGCCTTATTCACTTGCTCCATCTGCTATGCCTACTGCTCAGGTTTGA
TTAAATACattcaaaaaaacaacaacaatgagGTGAAACAGACTACGAAT
TTTTTTAATACTCACGGAGCTATTTCGTAAATTAAAGCTACTCTTTTACG
CAACGATATCCTACAAGCAagtgaaagatcgaaagttgtttcgagatgtg
accctcacattctattgcttttgtaaacaaaaaaatagcaaagttgattt
gacaaattttgttgtttttactacatcagcatcatcaAATGGAAAATTAA
GCTGAAAGCAAAATgttgacaaaaaaacaatacaacatttttgtcaaatg
atCCTGATATACTTTGTTAGATTGAAAAAAGGGAAGCCTCGACACACTGT
TGATATTAAAATCAGAGCATATATATATTACCGAACTTGATAAAGACAAC
CGTCGAAACGTCGTACACACTACTGTGTTTTTAATGTTCACTTTTAAGTT
TTAGCACAAATAtacattattatccatatagcggtcattaagtaagtcat
taaaggttcaatcggcgggcggtattgaaaggttttttgactcaaattgt
catacccGTGCTGAGGAAAATAAAGTGCcaggcttcagagggctgaaata
tcattaacggcccgggtatagggcaataacgtcatttgcggcccgctcgg
aattgaattgaagtcgttgcattgaagcgaagagactaaactaacgtcag
aaaaaacactttttggtcatttgcggcccgctcacaaggtgctaaaaatt
tgttgaagacattgcattgaagcgaaaagaatttgttgacgctagaaaaa
aacgttgtttgaatatccgatatggataataatagtaatagcgttaagtt
tttgttcgttgttgtcattaattctgcccttgcaatttgattattagccc
tctagtgccatttgcgccctccgcttcgcgtcgggcccaaatgacactat
cgggcgaataatcaaactacgcgggcagaaaataacaacaacgacctcaa
actgaacgctattgttatattgacTTTTACGTTCACTTATGTTATCGTTT
GTATAGACCTGCTCTCAGTTTTCGAAGACATGTATCGAACAAAATAGTTG
AACAAGAACTACAAGCTAAATATATAATCGCTAATTCGATGGAAAAGTCA
ATAGAGCTTTCCGATTACAACTTTTCTCAAGCTCCCTTGCCGATTGCCGA
GGTCAGTAATCcttcaaagaaaacaaagaggAAACAGATAGGAATGAATG
TTTcgtttttgaaatataattccCACCCATAAGTAACACcatgaataata
aaaaaacacataATGCACTTGAAAATACTCTTAAATCAAAAAGTGACGTT
ATCACGCAATTCGCTGCTTGTTGAGAGACGAAAggtttcatctttttcat
catttgaaataaatagaacttttgatagttgctcTTGAGGATGTCAGTTT
GTGCAGGTTCATGGTATTTTTTCGACTTATCTACGTTCCACCTTTCTCGT
TGACTAATCAATTTCATCCACCCTTCATCACCACACACACAAATCATTCC
ACAGCTGGTAGTCGTCTTGTTTGTACCCAAATTGGACAAACATTTTTACC
ATCATATAATCTTTCGTATTTTTTTACAAATGGCTGTCAGTTATCAGAGC
GTCTCACTTCATCAATTAAATTTCAACACCACCATTGCATTGTCCCGATT
TCCATTTCCATCGCGTTGTATTTTACAGAGGTTTTAGTTTTGGCGGTGGC
GGTGGTGGCGTTAAAAGGCGTTCTATGAAGATGAAGAGTTTCGGTGCCGG
TGATAGTGACAGTGACGAAGAAGAGTCGTTGTCATCATACATGTGTAGTG
TTGGTGCTCCTTCAGCTCTACCAACTGCCCAGGTACTTTGTTGTAACTCC
AAGATAAGGAGAAGAACAAGATAGAGGAAACAGACCAAAAGGCAACTGAA
TAATTGTTTGTCTAAAGAGAACCGATGTTTGGGAGAGGGTTTGGGTATTA
AGAGGTCAAAGTCAACAATtcttaaagattttcaaaactaTGAGATAAAA
TATATCTTTGACATGAATACTTTGGTCTACTGCCTTTTAGATAAATATCA
ACGTGATGGTGTTTGTATGATAAAACTTGAGTCAAACAGAATTCTAATTC
TTtacataaaaaatgaattttagtaCAGAACACGAAATCTAAAGCAGCAT
AACGTATCATTAATAGAATTTtgaaagttattcaaaaaacaccaACTCCA
CAAAATTTCAGACCTCCAGGGATACCAATCTGAAATGTTTTTGTCATGAA
AGCTTGCATTATGATGGAAGTTATTGAGAAATCGAAAAAATTCGTCTGTT
TTACGCAAGATTCAAAACCAGTAAACAAAATTTGCCGTATTTAACTCtgg
aaaattatttattttaagaACGTCCACGAAGTTCAGTCCAAAATGGGAAA
TGTCGGAGAACCCCATTTTCCGCTCTTCCCAACGTAATAAAAAATTCGAT
ATGATTGCTGCTCTTCTACCAAGTGCGCAGGTATTCATTTTGTGCTAAAA
AAAATGATGATACACTTCGATCACAGAaaagaaatgtttcaaaaaacaTT
GTATACAGTACAGACGAGACAATAATAAATGTTCATTTGTTCTGTCTGTT
TCctctttgttgttgttttctacttttatatttgttttttttcttcaact
ttACCACCCCCAACTCAAGCCTCCACTTagaactttcaattttgaatcGT
CAACCTTTTCACACAACATTTTCCATCCCAACCTTTTGAATATGATCTAG
TTAACCCCTGCATTTGTAATAACTCCCAAACTTATAACTTTAACCCATCC
GTGAGATATTTCACTTCATCATCCTTCCCCACCTACTAACAGGCGACAGA
AAATTTGACCAGTACCAATTTTGATATTCTGAGACCTTCCACTATCGAAT
CTGATGACGTAGAGCACAAAGTCTCCATCTGTCAATTGGACTTCTCCCCA
GAATTTGAATATTTGGCCATTCCCAAGAGTGTGGCACATGCCTTTTTGAA
GATCAAAGTGAAGAATGACAGCAATTATGCACTGTTGGCTGGCGATGCCA
ATGTTTTTTTGGATAATAATTTCCTGACCAAggtttgaaaataatatttt
ggctCTTTTGTACAAACTAAGCTACAATTAATTTCAagctttgttttctt
tcttaGCCAGTGTGTTTCTACGACTATCATCGACCATAAAATGTTTTGTG
TTCGTGTCAGTTTTCATACAGttggctctctctaattcgattagGGGACC
AAAAATGttcttcgaattaaagaaagattcgaattacagagagtattttg
TATCACTTTTCAGCTAAGGGGttaaatattttagttcgaattaaataaaa
attcgaatagtagaggttcgacTAGAAAAAGTCTTCATATTCATTTTTGA
CATTCATTCATTTCATTTATCCTTTAGACCACATTATCAGCTGTTTCACC
CATGGAAGAGTTTGACATTGCATTAGGTGTGGATCCATCAGTCAAAGTCA
CCTACAAACCCGTCAAGAAGTTCCAGCAGCGAACTGGTATGATCTCCAAA
GCTGATTTGTTCAATTTCCATCAAGTCATCGAGATCAAGAATACAAAGTC
ACTACCCGTCAAAATCAAAGTAACCGACCAATGTCCGTGGTCTACCAATG
ATAAAATTAAGGTACCCTTTTTGACACACTTTTATACTTAACTGCCTTCA
ATCAGTAGCCGATCTTCGTAGTTTTGCATTACATTTAtgggtacctaata
aacggggttggaataagcgcgATGGAtggaaaaattctaaaaacttaatt
aataagcgggggagggGGGCGGCTGGCATAAAAATgttctgggtggaaaa
tttttgaaagattaatTAGCGGGAggggacgcttattaggtacccgagag
tatcttCGTCGAGATTGTGCTTGTGTTACTATGTGTGCTACCGAAGTCGA
TTCCTTCCTACATTTGGGGTCAATTGGGCTATTGCATAGAAAATTCATGA
AAAGCCCATTGGTTTTTCAATTCATCGATCAGCAGAATGTGCGGAGACCA
TGGTCAAAAATAAGCAGATTGGGGAAATTACCATTTGAGTCATTTTTTTA
GATACTCGAGTCCTTATAGTCTAAAGTCTCTATATTCTTTTACCATTTTG
CCGTACTAACGtcaaacaatccaaaagttccctAAACAATCGAATTAAAA
CATTTCCGCTGAAAATTAAAACTTCCGAACAAATTGAGAGATGAACCAAG
CTGGCCGGATAAAAATTCAGTTTGTTTTTCAAAGTGGTTGTACCTTGTTT
TACTATCcaaattgttattattttgcATGTTTGATTGTTTAGGGAACTTT
TAGATTGTTATGTGTAATATTAACCCCTTCAAACCCGacagacgtgtata
cacgttttGAATTTGCCAAAATACCGAGTCTCAGATTTAAGAatataact
cctgaccacttgatttaaaagggcataaaccgaatacttttagaaagagt
ataaaatACATtaccaatggtaccaaaaccattgTCTTACTCCCAAGTTA
CaagcttttgaaattttggattaTAAAAAACCAGTtggaaattttcacat
ttttcaaaaattgttgcgCGCTGGAAATGACAACATTCTGTATTTCAATC
ACTTTTAGATTACACTACAAGATCCGGACATAAAATTTCCAAAGGGTAAT
TCATCGGATACATCCATCATCAAGAATGGGAATGCTTCATTGTATACAAA
CAACAATACAATCGAATGGGAGTTAGAAGTGCCTTCTTCAGAAACCAAAA
CTATCAATTTGAAATATCAAGTTGAACATCCCATAGGTGTTCGTATCGAA
GGACTTTGAAGGGATTTGAACGCAAAGACCATCGTATGACTTGTTGAAGA
AATGGACTTTTTAAGATGGACTAGGATTGAATAACATAAGCATCAAATTT
TCCCTTCGCTATATTCAGGAGGAATTCGACTAATAAGAGTATATAGAGTA
TAATCACGACCCATGATATAcgtgtattttatttttgtgggggtttcgaa
acttttttatgaaaattattaTTGAATTATGCAcaagataaatattttta
ttattaacATTCACATTATTTTACACATACCTAGTCCTAGTTGTGAGgac
gtgggggggggggggggg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_011259XLOC_011259Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00020031-exon-sc0000348-1491911889:94023..94529TCONS_00020031-exon-sc0000348-1491911889:94023..94529Clytia hemisphaericaexon
TCONS_00020031-exon-sc0000348-1510915933:94023..94529TCONS_00020031-exon-sc0000348-1510915933:94023..94529Clytia hemisphaericaexon
TCONS_00020031-exon-sc0000348-1575043694:94023..94529TCONS_00020031-exon-sc0000348-1575043694:94023..94529Clytia hemisphaericaexon
TCONS_00020031-exon-sc0000348-1491911889:100682..100922TCONS_00020031-exon-sc0000348-1491911889:100682..100922Clytia hemisphaericaexon
TCONS_00020031-exon-sc0000348-1510915933:100682..100922TCONS_00020031-exon-sc0000348-1510915933:100682..100922Clytia hemisphaericaexon
TCONS_00020031-exon-sc0000348-1575043694:100682..100922TCONS_00020031-exon-sc0000348-1575043694:100682..100922Clytia hemisphaericaexon
TCONS_00020031-exon-sc0000348-1491911889:101279..101490TCONS_00020031-exon-sc0000348-1491911889:101279..101490Clytia hemisphaericaexon
TCONS_00020031-exon-sc0000348-1510915933:101279..101490TCONS_00020031-exon-sc0000348-1510915933:101279..101490Clytia hemisphaericaexon
TCONS_00020031-exon-sc0000348-1575043694:101279..101490TCONS_00020031-exon-sc0000348-1575043694:101279..101490Clytia hemisphaericaexon
TCONS_00020031-exon-sc0000348-1491911889:101876..102005TCONS_00020031-exon-sc0000348-1491911889:101876..102005Clytia hemisphaericaexon
TCONS_00020031-exon-sc0000348-1510915933:101876..102005TCONS_00020031-exon-sc0000348-1510915933:101876..102005Clytia hemisphaericaexon
TCONS_00020031-exon-sc0000348-1575043694:101876..102005TCONS_00020031-exon-sc0000348-1575043694:101876..102005Clytia hemisphaericaexon
TCONS_00020031-exon-sc0000348-1491911889:102191..102351TCONS_00020031-exon-sc0000348-1491911889:102191..102351Clytia hemisphaericaexon
TCONS_00020031-exon-sc0000348-1510915933:102191..102351TCONS_00020031-exon-sc0000348-1510915933:102191..102351Clytia hemisphaericaexon
TCONS_00020031-exon-sc0000348-1575043694:102191..102351TCONS_00020031-exon-sc0000348-1575043694:102191..102351Clytia hemisphaericaexon
TCONS_00020031-exon-sc0000348-1491911889:104901..105054TCONS_00020031-exon-sc0000348-1491911889:104901..105054Clytia hemisphaericaexon
TCONS_00020031-exon-sc0000348-1510915933:104901..105054TCONS_00020031-exon-sc0000348-1510915933:104901..105054Clytia hemisphaericaexon
TCONS_00020031-exon-sc0000348-1575043694:104901..105054TCONS_00020031-exon-sc0000348-1575043694:104901..105054Clytia hemisphaericaexon
TCONS_00020031-exon-sc0000348-1491911889:106065..106304TCONS_00020031-exon-sc0000348-1491911889:106065..106304Clytia hemisphaericaexon
TCONS_00020031-exon-sc0000348-1510915933:106065..106304TCONS_00020031-exon-sc0000348-1510915933:106065..106304Clytia hemisphaericaexon
TCONS_00020031-exon-sc0000348-1575043694:106065..106304TCONS_00020031-exon-sc0000348-1575043694:106065..106304Clytia hemisphaericaexon
TCONS_00020031-exon-sc0000348-1491911889:106650..106883TCONS_00020031-exon-sc0000348-1491911889:106650..106883Clytia hemisphaericaexon
TCONS_00020031-exon-sc0000348-1510915933:106650..106883TCONS_00020031-exon-sc0000348-1510915933:106650..106883Clytia hemisphaericaexon
TCONS_00020031-exon-sc0000348-1575043694:106650..106883TCONS_00020031-exon-sc0000348-1575043694:106650..106883Clytia hemisphaericaexon
TCONS_00020031-exon-sc0000348-1491911889:107881..108390TCONS_00020031-exon-sc0000348-1491911889:107881..108390Clytia hemisphaericaexon
TCONS_00020031-exon-sc0000348-1510915933:107881..108390TCONS_00020031-exon-sc0000348-1510915933:107881..108390Clytia hemisphaericaexon
TCONS_00020031-exon-sc0000348-1575043694:107881..108390TCONS_00020031-exon-sc0000348-1575043694:107881..108390Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000348supercontigsc0000348:94023..108390 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
7.41731	8.64995	19.0552	18.8084	12.472	8.28382	5.54046	7.30455	6.99253	8.16943	14.2541	5.72148	15.6557	12.5754	5.81334	6.42909	4.96746	5.37821	7.55178	9.91072	10.4519	8.09992	4.76962	5.70599	7.48259	8.56419	9.76098	10.9422	15.9411	12.7056
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00020031 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top