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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00020018 ID=TCONS_00020018|Name=TCONS_00020018|organism=Clytia hemisphaerica|type=transcript|length=1073bp
aggaaatccttccagctggcaaatcaaaacagatatttgcaaattttagg
tcggtggctgcttctgctATGATAGCTTCACTTAGCTCTTAGGAGATCAA
GCAAAATGCTGTAAGCTACCTGAAGTAAATATATTTTAGCGTGAACCTTT
TTTTGCGATTTAAGAATTTTCCAAATAAGCCCCTTTTTCACCTatatata
ttttcttgaaatatttactTGACTCATACTACGAGCTACTTCTAATTTCT
ATATTGAATCATTGATTTACTTTCCTCATGTGGTCATTTTAGATCAAGTT
TTTCATTGATAGATTTCGGTGTCATTAAATTTTCTTTGCCCCTTTGCAGA
GGAAAAATAACCTTAAAAAATGTGTGCTATAATGCAATTATGCGTCCTCT
CAGCAACCTTGGACTAACTACCCAGTTCCCCTTACATGTCATGGGGTAAC
AGGTTGTTCACTTGTCAAGTAAACCACTGCAAGTGGAAATCAAACCAGTA
AAGGAATAACTACTTTACCACAGGCTATTCATTATATCATTAGATATCTA
TCTAGccccaagcgttaaactttattcgcagtctagtttatgatattttt
gctgcttgtttaacgcttggtgcaggtaactgactctgcagaaaaaagga
aaacaaatgaaaataaaaacatagattcatttcgaaacaaaaaaatgact
gttggctggaagtctaaatacatgtggttGATGTTTTAATGtcgttttta
gtagttttgaaagtctttagagcttgtgaaagagtttttatggtaagttg
attatgtgtgtttgcctgggtttccaaagctcagaaagtctgtcaacaag
ggttcacacacagactgtttataacattctgtgtcagactaatctacctg
caccaagctctataatcttagNNNNNNNNNNNNNNNgtcagactaatcta
cctgcaccaagctctataatcttagaactaTCCATCCATTCATTTTAAGT
TGATGATGTATCAATACTCAAGTATGTATGTATGCAATAGGCTTCTTGGA
ACCAATGGATATGCAAtatcgat Run BLAST on NCBI transcript from alignment at sc0000345:305184..306256 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00020018 ID=TCONS_00020018|Name=TCONS_00020018|organism=Clytia hemisphaerica|type=transcript|length=1073bp|location=Sequence derived from alignment at sc0000345:305184..306256 (Clytia hemisphaerica)
atcgataTTGCATATCCATTGGTTCCAAGAAGCCTATTGCATACATACAT
ACTTGAGTATTGATACATCATCAACTTAAAATGAATGGATGGAtagttct
aagattatagagcttggtgcaggtagattagtctgacNNNNNNNNNNNNN
NNctaagattatagagcttggtgcaggtagattagtctgacacagaatgt
tataaacagtctgtgtgtgaacccttgttgacagactttctgagctttgg
aaacccaggcaaacacacataatcaacttaccataaaaactctttcacaa
gctctaaagactttcaaaactactaaaaacgaCATTAAAACATCaaccac
atgtatttagacttccagccaacagtcatttttttgtttcgaaatgaatc
tatgtttttattttcatttgttttccttttttctgcagagtcagttacct
gcaccaagcgttaaacaagcagcaaaaatatcataaactagactgcgaat
aaagtttaacgcttggggCTAGATAGATATCTAATGATATAATGAATAGC
CTGTGGTAAAGTAGTTATTCCTTTACTGGTTTGATTTCCACTTGCAGTGG
TTTACTTGACAAGTGAACAACCTGTTACCCCATGACATGTAAGGGGAACT
GGGTAGTTAGTCCAAGGTTGCTGAGAGGACGCATAATTGCATTATAGCAC
ACATTTTTTAAGGTTATTTTTCCTCTGCAAAGGGGCAAAGAAAATTTAAT
GACACCGAAATCTATCAATGAAAAACTTGATCTAAAATGACCACATGAGG
AAAGTAAATCAATGATTCAATATAGAAATTAGAAGTAGCTCGTAGTATGA
GTCAagtaaatatttcaagaaaatatatatAGGTGAAAAAGGGGCTTATT
TGGAAAATTCTTAAATCGCAAAAAAAGGTTCACGCTAAAATATATTTACT
TCAGGTAGCTTACAGCATTTTGCTTGATCTCCTAAGAGCTAAGTGAAGCT
ATCATagcagaagcagccaccgacctaaaatttgcaaatatctgttttga
tttgccagctggaaggatttcct
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00020018-exon-sc0000345-1491911889:305184..306256 | TCONS_00020018-exon-sc0000345-1491911889:305184..306256 | Clytia hemisphaerica | exon |
| TCONS_00020018-exon-sc0000345-1510915933:305184..306256 | TCONS_00020018-exon-sc0000345-1510915933:305184..306256 | Clytia hemisphaerica | exon |
| TCONS_00020018-exon-sc0000345-1575043694:305184..306256 | TCONS_00020018-exon-sc0000345-1575043694:305184..306256 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000345 | supercontig | sc0000345:305184..306256 . |
Blast
The following BLAST results are available for this feature:
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