TCONS_00019985 (transcript) - C. hemisphaerica

Overview
NameTCONS_00019985
Unique NameTCONS_00019985
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2122

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00019985 ID=TCONS_00019985|Name=TCONS_00019985|organism=Clytia hemisphaerica|type=transcript|length=2122bp
TAAAAGATAAAGATCGATTATCAGTTGTAACGTATGATACCCAAGTTTAT
TTGGATTTTCCATTACGTAAAATGGACAAAGATGGAAAGGAATTTGCTGC
AAAAAAAGTTGAAGCTATACGTGATGGGTCAACAACGAATCTTTCTGGGG
GTTTGTTAAAAGGTTTATGTCAAATGATCGAGCgtaaagagaaaaatgaa
gTAGCATCTGTACTTTTGTTTACTGATGGGTTGGCAAATGCAGGTATCAC
AAATGCTGAAGGGATCGTAGCTGCAATGAAAGATCCTACACGATTCAGTG
GTGTTGCTCCACAACCTCAATTacaatttcaacaaaatattCTACCACAA
CAACCAGCACCACATCAAGGCTGGTTAAGGAATGTTTTTGGTGGAAGAGG
CAACCAGAATGCGGCGCCACAACCGCAAATGCAAGTGCAACAAATGGAAG
TAGATCCACCAGCATCACTTCCACCAGTCGAATCCTCCCCCGAGAAGAAG
AGTACAGATGCCACCGTTTATACTTTCGGTTTCGGAGATGACCACGACCC
AAACATGTTGACCAAAATCTCGGACGCTGGAAACGGAATGTACTATTATA
TCGAAAATGAGGATAAGATTGCCGAATCTTTTGCGCATTGTCTTGGTGGT
TTGATGAGTACAGTTGGTCAAGGAATTCAACTTCACGTCAATTTGGAGCA
AGGTGTCACCATCAAGAATGTCCATACGGTCAAACCATTCCAAAAGATTA
GTGACCAGagtGTGAAAATTGACATGGGTGATTTACAAGCGGAAGAAAGA
CGAGATATCGTTCTCGAACTAACATTAGATGCAGTCCCTCAGCCTTACAG
TTCAACTCCACAACTCATTTTGAAAGCACAAGTGGATTATTTCAACGTGT
TGACCAACCAACTTGGATCGAAACAATCCGATCTTTCAGTACTCAGGCCA
GAAACGACAGAAGAACACGACGAGGCGCATGCGCACAAAGAAGTTGGTAA
ACAAAAATATCGACACAAAATGACCAAAGCTATGGAAGAAGCTACTAGAG
AAGCTGACTCGGGTAATTTCCAAGGAGCAAAGATGCGATTGCAATCAGAG
ATGGCTTCTTTGAAAGCCAAATCCTCCAATTCATCAGTGGCAGCTGACGT
GGATTACTATGCCAATATGTCCAACGATTTGGAAATGATGAGTGACCAGA
TGTCTAGTGCTTCTGCTTATAGATCTAAAGGAAGCAAGCTACAAAGCAAC
ATGATGCAGCAATATCAAGCTCAGAGAAGTTCCAACCTCGACTCAAATGC
ATTCGCCAAGAAAGGCCACGCGAAGAAACGAGCAGCAGCTAAAAGCttca
tgaaaaagtaaaatatataaGTAGACACTATTCATTACACTTATTATATT
ATAACCGATGGTATACTAGAAAAGATACAGTGTTtcccgaaaaaaaaaag
aaattcttatatAAGTAAAATCTTCATGACTTGTATACTTAATATTTCAA
TCTCTAAAActtattcaatcatcttgggaattgaatatctattgattgaa
cagagaattgtaatcttattttattaattattCTATGCTCACTGTGGATA
CTGAGTTTTgtttgaggattttactttatataaaatttgtCGGCTTTTTC
TGGGACACACTGTAGTGATATCATTCCCAACATGGGGAAATAGACAATCC
CTGGCCGAAATCCTTGTCAAGTTCTTGTAAGATCTGATAAGATCCTGCAA
GTAAAGATCTTGTGATATATCAGATCTTGCAAGCTCttacaaaaagattt
tctaagattataaaagaaaaaaagattttaccaaGACAAGATGTTAGAAA
GTGTAAGTGAAAGTTCTTccaagatcttatcaagaattttgaccagggAT
GTCATACTGAAAAATGATTTCATTGACCCTAATATAGATCCTGGAATATT
TATAGTTATTTTATAgttaatttataaaaatttgtaaaattgaatatttc
tgaaTTTTGTATTTCTGCATGTCTTTTTTAGTTGGGTGGGCTTAATTTTA
TAACTAATACTAATGCACttagatattttttttctactgATCTTGAAATA
AGTACTCATAAACGAAACAATG
Run BLAST on NCBI

transcript from alignment at sc0000345:311467..324478+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00019985 ID=TCONS_00019985|Name=TCONS_00019985|organism=Clytia hemisphaerica|type=transcript|length=13012bp|location=Sequence derived from alignment at sc0000345:311467..324478+ (Clytia hemisphaerica)
TAAAAGATAAAGATCGATTATCAGTTGTAACGTATGATACCCAAGTTTAT
TTGGATTTTCCATTACGTAAAATGGACAAAGATGGAAAGGAATTTGCTGC
AAAAAAAGTTGAAGCTATACGTGATGGGTCAACAACGAATCTTTCTGGGG
GTTTGTTAAAAGGTTTATGTCAAATGATCGAGCgtaaagagaaaaatgaa
gTAGCATCTGTACTTTTGTTTACTGATGGGTTGGCAAATGCAGGTAGGAA
TAATAACTCCTTTGTTTTTTATCCATTTTAGAGTGTTTACAATGATTGTG
CTTCAGGAGCTCAATCCAAGGTTGTGGGTTTTAATCCCATCAATATTTTA
TATCTTAATCTGGAAACGGAAAAGGGATATCGATGAAATACGANctcctt
tgtttttatctattttagaGTATTTACAATGATTGTGCTTCAGGAGCTCA
ATTCAAGGTTGTGGGTTTTAATCCCATCAATATTTTATATCTTAATCTGG
AAACGGAAAAGGGATATCGATGAAATAGGACcagcaattttttttaattt
taacaatAGTTCGAATAATTTAATACTCATCTTCAGTTCTAAATACAAtt
aaaagcattcaaaaagaacaatatTAATAGGGATAAGGGATATGTTCGAT
CAATCCCATTTCTTTTGAAAGCAATACTTTCAGCCAATAGCTTTGAAATA
TAATAATCCacatttttggctgattttttcaGATTCTCCAAGAAAATTAG
CATGAACTATATTCCAGCTCCAAGGCGaatccgaaaatttttttcttgat
tatcCAACAAAATCAGTTTAAACTTGCTTTGAACTCTGAGGCAAGATTTT
CTGACCTTTTTGTATTTAAAATATGTATCTTCTTATGTTGTTATCATAGG
TATCACAAATGCTGAAGGGATCGTAGCTGCAATGAAAGATCCTACACGAT
TCAGTGGTGTTGCTCCACAACCTCAATTacaatttcaacaaaatattCTA
CCACAACAACCAGCACCACATCAAGGCTGGTTAAGGAATGTTTTTGGTGG
AAGAGGCAACCAGAATGCGGCGCCACAACCGCAAATGCAAGTGCAACAAA
TGGTTAGTTTTTCTACCAATATCAGTCTCGAGACCGTCAAATTAGCCATT
TTTTGTACTACCTCGTAAAGTGTCtaaaataaaagcttttttataattta
tatgATCTGCCCGTGGCAAACGGTAGTCCTTGACCCAATAAGCCTAAAAA
TGGTATATTATCaggggcactgacctttatataaccctggaccaagcaat
atctgccatctttgatcggagtttttttagaattggtacccaaggagaag
ccattgcaatgctaaaaattaacgtctaacgccgctacatcatcaaaaga
atttgaggaaaagtagacctagcgctctcgatgcatttacaccgctatcg
aNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgtgcc
gacattagggtaccaattttcaaaaaactccgatcaaagattttgcttgg
ctgggattgagaagctttgtccagggtatataaaggtcagtgatcagGGG
tagtcaaagcaaatttttcagaaaatgagtaaGAATACAAATCAAACCTT
GCCCTGACGCGAAAGTTCGAAGTGCTAATAAACAAATGTGTTTAGGACCA
TTCGGCTATAGTGTATAAAGGTGTACAAAGGCATTGGCCAGCCTGATTAG
AAATCTAATTGATTGCTCATTGCTTGATTCTAAGCAACTAACGAGAGGAG
TCAAGAGTTTAGTGGATTGAATCAGGAGACTGATTTGTGCCCTCCTTTAC
TTTATGTGGCATCCGATAtgaaggtcataatatttgagaaaaaagggaaa
ttcccacgaaatcttacaaacgatttggaagcgctctaatttaggttgga
agggtagagttttaacttaaGATCTGAGGATACAGAAgatcaaaaatggt
ccaaaagggctcagaatatagcctagaagtctataaacccctcccgattT
TAATTTGCTAAGAACGTAGTCTAGTacgctagacgactaattcagacata
gtaaaAATAAAGCGAAAAGTAATGGAAGAGAACAaatttagtcgtctaga
aaacTTTTTGTAAGCTACAAAAGTTGCATATTAATATTGGTTTGTTAATG
GAGAAAAAATCTAGAAGGCTTGTTCAGAAAAAATggtttgttatgatttt
gtaaatcgatttgattggtttagaaaaaCAATCAAGACGCACatcattgg
ttgaaagttttATTCCGTATTGCTTTTTTCACATATATGGGTATATACGT
AAAAAATACTTAACATTTAACATTTCACGTGCATCATGGTGGGGTTTACG
CGAGTAGCTTTGGCAAAACCTGAAAATCCTCTGTCGTTATATCCAGACGA
TCCTATAATCTAAAGTGAATGCGTACAAAAGAAAGGGAAAGAAGCCGCAC
GGGAAATAAAAAGTCGGGCGGGAGTTTTCTCCGTGCGGGtgggttgaaat
tttgagggggcTCAACGTCTTAATTATAATGCAGCACTTCTGCGACATTC
ATGTAATACTTTGTCACAACCTCCGCACTGTATTTTTTTCCGTGCGCTAA
TCTTGACGggcgataacatcgtctagttTTATCAAACATTCCACTTTCTT
TTTGAGCAGGAAGTAGATCCACCAGCATCACTTCCACCAGTCGAATCCTC
CCCCGAGAAGAAGAGTACAGATGCCACCGTTTATACTTTCGGTTTCGGAG
ATGACCACGACCCAAACATGTTGACCAAAATCTCGGACGCTGGAAACGGA
ATGTACTATTATATCGAAAATGAGGATAAGGTATGTAATTTAAAGTTATT
CCTTTTCGTAATATAGAAGGAGTCTAAAGGAAGCAGGCGTCCTATGCTGA
CAATGCAAaatgaacaatagaatttttacaaattttgtacTCGCACGGCG
CGtatatacacccccttctcacagacccagtgggggtaaaaatatgGGAC
caaaacttgatggggattgatattcccatgtttttatggctggggatttg
aattccattgttttcgagctgGAAAATTCAGTGGCGATGAAAAAATAACA
CGATAATTTGCAGTGAAGATTTTCTTATCTGACTATTTTCAGTGGAGAtg
aaaattagagtataattttatactggggacgatattttggccaatttttc
cagtggggctgtgagaaggggtgtgcATAATGATGGTTTCCTTTTCTGaa
gatttaattttcatttattttttctttctttcccaGATTGCCGAATCTTT
TGCGCATTGTCTTGGTGGTTTGATGAGTACAGTTGGTCAAGGAATTCAAC
TTCACGTCAATTTGGAGCAAGGTGTCACCATCAAGAATGTCCATACGGTC
AAACCATTCCAAAAGATTAGTGACCAGaggtaaaaaatgtttttctataa
gaacatccataTATTTTGATGTCTTTGGATGTCCTTCAGTGTTGCAACTT
TCCCGTCTGTAGACGGAATCCGTGCAGTTGAGATACATGAAGTTCTTCGA
CTTGCCAGTGACATTGATTTGTGTCAAATGACCATCTAATTTTAACGCTA
GTTGCAACTGTaaaagtttttgagttttaagtctaaaaattttGCTAGTT
TCttaattttgtgaatatttttgtgcaatattttaaaaagattggGTGTT
TGAGACAGTTTTAGAGTACTTTAATCTTTATATGAGACGTTTTGTTATAT
AATTACTCTTTTGTACTTAACTGTAGGCGtgtcatttttcttttcttttt
tttttgggaaagaATTATCCTCAAAGAACGAACAGTCGCAATCAAAAGGC
TGATGCTGAAgcaacaaaattttaaattcggTAAAAAATCCCTTAAGGTT
ACTCTTTATAACAATTTCTTGACTTTTACAACCATAAATtcattatgttt
tattttttctagtGTGAAAATTGACATGGGTGATTTACAAGCGGAAGAAA
GACGAGATATCGTTCTCGAACTAACATTAGATGCAGTCCCTCAGCCTTAC
AGTTCAACTCCACAACTCATTTTGAAAGCACAAGTGGATTATTTCAACGT
GTTGACCAACCAACTTGGATCGAAACAATCCGATCTTTCAGTACTCAGGC
CAGGTAAGGAGAtaactttcaaagtttttaacaatcgggcttttccagaa
aaaattgaatatgggggtggaggatacaacgattttcagtgatttacggG
TTTTACTcccggacaagcattagttgaccccccagacaacccaaattacc
cccagagagagcaagtttaccccccggacgaggcaaattttggtgatttt
acgctacccccggacaatatatcctccacgcCCCCATGAACGGACATtct
ctggaagagcccattaaaggtattatttttacataagttttCCCGTTTCA
TGTCAGACACATATTTAATATCAGGACATTGtttacctattgttatattg
tgctgatataaacaaaaagtgtttttcttttcctctttctgaccaatctt
gctctacatccgtgtcaattcgaTATCAAAAAGCCTTTTAATTAaagttg
atgagtaagcaaacgatatcacttatttaaaaacaaaacctttaatgcac
tatttggcagtaaaaggcataaaatcgtgaaaatattgtcttcTAGTNCC
TTCTCTTTATAaccaacaaaactttttttgaactCTAAAACTTCAAAGTC
ACATAAAAGTCTCTCTTTTTTAGAGTACCGTTTGAAAAGTCTTCCTGAAA
ACCTTTACAAATTAAGTGGTCAGGGGTTATGACCTTAAGCATCCATAATG
ATGAAATAAGCTTTTCAGAACAAGTATACAGGTTCAGTCacttttcggtc
ggggttgtggatggccaaaagtggactttttttattctaatAATGCTTAA
TAACTAACATGCACTATTTGGCAGTAAAAGGcataaaatcgtgaaaatat
tgtcttcTAATAAtgtcattcgcgaaattaaaggttttgtttttaagtaa
gagtgatatcgtttgcttactcatcaattttaattgctttgattgatttt
aagctttttcgcattggattgacacggatgtggagcaaaatcggtcagaa
agaggaaaataaaaatatttttgcttatatcagcataatataacaatagc
aagacactgtcctacgggaacacttatgagaaataaaacctttaaatccc
TGCGAAATCTATTCCCTGGGAAAATTTATCTCATAAAAGTGCACAACCAC
ACCCAAACCCAACCTTACTAGGTTGCCTACAGCTCCAAATCCATTTATCC
ACTTGCCTGAtcgaaaaatatatttgtgtcTTTGGATACTGTGAGAATAC
TTCTATGCTGCGAGAAATGCACCGCCACTACACACGTTTAAAACCACATA
GAATAGTTTATACGTAAAACATTGAAAACCTACCATATATACATTCTATT
TTTTATGATATTCTTTAGAAACGACAGAAGAACACGACGAGGCGCATGCG
CACAAAGAAGTTGGTAAACAAAAATATCGACACAAAATGACCAAAGCTAT
GGAAGAAGCTACTAGAGAAGCTGACTCGGGTAACTAAGAAATCTAGTATC
TGTGAAATCATTTAAAGCGTCAATATTCATAAGGACAAGCATATCCGTAT
AAAAATAACCCAGTCtggcagatgagatggagtttttataagatacttta
ataatttgtcatttgaagtaataacaAGAAGCCTGTTGgcttgaaggccc
agcgaaaagtaacgtgttgataaagagcgtgcaaaacagcaaatgtatga
ccctgttgacatggatcaaagtgaagacagggaaaatttttccaaaNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNGctgtacttctcattggttagacgcttgaaattttattgaatggtc
tcctaccaaccGGCGCAGGTTCACCCGGTTGAATANNNNNNNNNNNNNNN
NNNNNNNaacttgcatcagtggaggctaacataacatgcataacatgcat
agccctcaaatgaaagacctggctggtcactaaaatacaactatgcagct
ccgctcgtagctctactctaccatttttgttttgatttaattttgtattt
taatgaccagccaggtctttcatttgagggctatgcatgttagNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaatcttt
aaaaaactagacgataaaatagtttacggtctgcatatcaaggctaataa
aattcatgagatttaatgtgagttaacagttaatgTGAGTGAtggatcca
gaaatgaccattttcactgttcattcattgtaaccatgaaaaatgtttca
atctagttcaaatttacccatgagctgcattttagtgtcaattaacagat
tccagaatcagtttataNTAGGTAGAActttcactcataaaactttatga
aaacttgagcaaagactataaggtatggcagaatgttgaaaaaaggttta
taaagaaaaataattacaaaatNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaaagtgtgttactggtt
ttaggcgccgtttctaccaaaacggacagacagatACACGGACGGAAaag
tgctaatgaaaggccctattgctagcgctgggccaaaaatgaCGCTTTct
tagaaattaagtaacaaaaTTGCTTTATTGCACGTTAACGACCagccaaa
tcaaataagagcgtGTAAAAACCCCATCTCGTCCCCGGTCTGGAAGCTTT
TTTGTGTCTTTCTATCAATAAGATCTCGAACTTATGATAACTGACTTTCA
GATCAGAGCTTTTATACGGACTattcatagatttataaaaaaagtgcttt
tgctgaaaagtgtgccgaggttaggtaggaaatcttaCCTGAGTCACGCG
ACAttaaaatagaatttcagcgcttgaccaatcagcagcttcgcgggttt
tcgaaaacaatagcagcaatagtttttgcgatattcactttttggaccta
ccccggtggaggtcctataaattaacccgtgttcgttagttagttcgttc
gttagtacgttagttaccaacttttctcgagattNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNcttt
tctcgagattggctcattcaatttttctgattttttgcacaaaggtgcat
tactataaaccctcgaatgtgacggagcccgattttcgaaaaaaaaatat
ttccggccggtagaaccggaaatgtcccgaaaaaagcggttttttgagat
tttctcgagattttatcattaattttttgcgattttttgcacatggatgc
acattagtactgccgaaaaggtgtcgaaaaccgtttgccgaaaaaatttt
ttttccggtctgtagaaccggaaatgtgccggaaatcgtggTNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNagggccgaaagtcagctcgcaaccatagtccccccccgga
aggcagctaggacacgcagacaaaaaagcgtgatagcgcaattttatgtt
gctttttatgaAATAACTTCATCATAACTTCGatgacttttcaaattcaa
caatgacttagatttacagcaaaataattgtcgacatagatgtttaaagg
TCGAACAAAGAAcgaagaaagaagtttttactttgaatttatttttaatg
ttgctgttgttctaacaaacttgtcttgtgattcttatgttttattttat
atttgttcttttctttaacagatactatttaaaagattttcttttgtttt
gaaaagaattcgaatgtctcaaataaaataaggtcgttaattacattcga
aaacataaaacaaaagaaaaaaaagaaaaaaaaagaaaagaagtctaatc
tatcaatcaaaacaaagtctttataaaacggcgcgaatctgattcaacac
atttgtggagcaagcaaaagtcatcttttaaaagaacaaaacattgcttg
cgaaaacgaaagtgacacacaaaaaacaaaccaacaaacacacatacagg
ctattaatatatagatgggACTATTTGTCTATTTCATAGAATTCGTGTTT
TgcgtacatgatttttttctatgtCACTGTAgaaatcaacttttttattg
ttaaacACTCTTTTGCGAATTGAGATTGTAAGTTTTACAAAGGCAACAAC
AATGGAAAACGTTTcttgaattcccatatcaatTGAATGATGACAAACAA
TCAATTTTGTCAACTTcaatatattcatgatatgcaccgcTACAATGTCT
TCAATCTGACACTACATCAAGgccccaacagctgattggttgcaagtgac
ctatgtcagaagacattgcaatggtgctgTCAGAAGACATTTTCATTGGG
GCatacactgacctttatatatccctggaccaagttactcaatgtcggcc
aagcaaaatattatgatcggagtttttttgaaatttgtacccgcggagag
agcgctagatctagtttcgattgtacactaatgatgtagcgccgtttgtc
gttaggcaaagtttcaaacaatacaatagcttctttgCGGGTCTACCAAC
TTTCAAGAAAACTtggatcaaagatggcggatatagcttggtccagggat
atcaTGGGCAGTCTAAGTAGCACTTTATTATTTCACATATATCATCGATT
CATACAGGTAATTTCCAAGGAGCAAAGATGCGATTGCAATCAGAGATGGC
TTCTTTGAAAGCCAAATCCTCCAATTCATCAGTGGCAGCTGACGTGGATT
ACTATGCCAATATGTCCAACGATTTGGAAATGATGAGTGACCAGATGTCT
AGTGCTTCTGCTTATAGATCTAAAGGAAGCAAGCTACAAAGCAACATGTA
CGTtggtaatttatgaaaaaaaatctaagcCCATTTTTTTAGACCAGTAA
ACAACAGTCCTGGTAAAAGAACCTTAAGGGCTTGAAAAATGGTGGGAATT
CAATCTGGCGGATGAAGgttatttttttaccaaaaaacgcAGTTGAAtag
gaaaaacctgttttaaggcctggAATAATTCACATTTTGTGGAATGAATA
CGATAAttaaaatttggcgggaattcaatttggcggatgacgggaaaaac
taaatttggcgggaacttaatttcttcttttatggTCGATGGAATTTTAC
CCATTCTACTGTTTTTTAGGTTTGCCCTCTTCTTTCCTTTCCCTACAGTT
ATGCTAAATCAGTTTGAAGTCTCCCATGCTGGAATTCGACATTGAATAGG
GGGGATTATGGCGATTGCCATGGAAAATTAGATCGATTCCATTACTTTTG
GCCACTATTGTACtaatctggcacccagatggtgaaattttcatccgaca
cgctaaagctctgaaggtcgggaaaattttcaacatctggaaggtttaca
ttacggaattttgcgaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNagcgggaggtctggtaacccagcc
ctcgttttcggggattgtcgggtccaaccaaaatatttatGACTTTACGT
GCAAGGGCttttgaacccgactgaggatgcggcacatcaaaggccgacta
tcattcctctccgatgggaaattggcccgctccctttagagctttagcgt
gggcggccgccaatccgccatcggaatatcagataactatTGTACTCTTA
ATCGTATCACGGAGAGGGTGAGAATCAAAGGCACTCTGCCATTTGCTAAA
ATAGGTGTTTTGTAGGCGTGTAGGCGTGCAAATCTACCCATTTTTCAATT
AATACATTTTACTCCAGGATTCAATCCATCCCATATTGTATCCTCACCCG
GGCTCACCATGAGGTAGTATGGCTGTTAGAGTAGATCCCATACCTCGCTA
TCTATATGTTCAACATACAGCTGACTAGAAATTAGAGAGAGCTCTAATTT
GATCCTTAAGAGTCCAAAAGATTTATACGAATTAGAGAAGGATTCAAATT
GAAGATCGAGTAACtttttccagctgaggggactaaaactttagtttgaa
ttaaagaaagattcgtgTAAACCGTATTTCTCTATTACCTAACATTATAC
TTATttagaataaatattttagaagTCGTTTGCGGTGAGTTGAGTTTTTA
CTAAATTCATTTTCTAACAATGTTTATTTTCCTATACTGTAGGATGCAGC
AATATCAAGCTCAGAGAAGTTCCAACCTCGACTCAAATGCATTCGCCAAG
AAAGGCCACGCGAAGAAACGAGCAGCAGCTAAAAGCttcatgaaaaagta
aaatatataaGTAGACACTATTCATTACACTTATTATATTATAACCGATG
GTATACTAGAAAAGATACAGTGTTtcccgaaaaaaaaaagaaattcttat
atAAGTAAAATCTTCATGACTTGTATACTTAATATTTCAATCTCTAAAAc
ttattcaatcatcttgggaattgaatatctattgattgaacagagaattg
taatcttattttattaattattCTATGCTCACTGTGGATACTGAGTTTTg
tttgaggattttactttatataaaatttgtCGGCTTTTTCTGGGACACAC
TGTAGTGATATCATTCCCAACATGGGGAAATAGACAATCCCTGGCCGAAA
TCCTTGTCAAGTTCTTGTAAGATCTGATAAGATCCTGCAAGTAAAGATCT
TGTGATATATCAGATCTTGCAAGCTCttacaaaaagattttctaagatta
taaaagaaaaaaagattttaccaaGACAAGATGTTAGAAAGTGTAAGTGA
AAGTTCTTccaagatcttatcaagaattttgaccagggATGTCATACTGA
AAAATGATTTCATTGACCCTAATATAGATCCTGGAATATTTATAGTTATT
TTATAgttaatttataaaaatttgtaaaattgaatatttctgaaTTTTGT
ATTTCTGCATGTCTTTTTTAGTTGGGTGGGCTTAATTTTATAACTAATAC
TAATGCACttagatattttttttctactgATCTTGAAATAAGTACTCATA
AACGAAACAATG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_011227XLOC_011227Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00019985-exon-sc0000345-1491911889:311467..311709TCONS_00019985-exon-sc0000345-1491911889:311467..311709Clytia hemisphaericaexon
TCONS_00019985-exon-sc0000345-1510915933:311467..311709TCONS_00019985-exon-sc0000345-1510915933:311467..311709Clytia hemisphaericaexon
TCONS_00019985-exon-sc0000345-1575043694:311467..311709TCONS_00019985-exon-sc0000345-1575043694:311467..311709Clytia hemisphaericaexon
TCONS_00019985-exon-sc0000345-1491911889:312366..312568TCONS_00019985-exon-sc0000345-1491911889:312366..312568Clytia hemisphaericaexon
TCONS_00019985-exon-sc0000345-1510915933:312366..312568TCONS_00019985-exon-sc0000345-1510915933:312366..312568Clytia hemisphaericaexon
TCONS_00019985-exon-sc0000345-1575043694:312366..312568TCONS_00019985-exon-sc0000345-1575043694:312366..312568Clytia hemisphaericaexon
TCONS_00019985-exon-sc0000345-1491911889:314176..314346TCONS_00019985-exon-sc0000345-1491911889:314176..314346Clytia hemisphaericaexon
TCONS_00019985-exon-sc0000345-1510915933:314176..314346TCONS_00019985-exon-sc0000345-1510915933:314176..314346Clytia hemisphaericaexon
TCONS_00019985-exon-sc0000345-1575043694:314176..314346TCONS_00019985-exon-sc0000345-1575043694:314176..314346Clytia hemisphaericaexon
TCONS_00019985-exon-sc0000345-1491911889:314803..314945TCONS_00019985-exon-sc0000345-1491911889:314803..314945Clytia hemisphaericaexon
TCONS_00019985-exon-sc0000345-1510915933:314803..314945TCONS_00019985-exon-sc0000345-1510915933:314803..314945Clytia hemisphaericaexon
TCONS_00019985-exon-sc0000345-1575043694:314803..314945TCONS_00019985-exon-sc0000345-1575043694:314803..314945Clytia hemisphaericaexon
TCONS_00019985-exon-sc0000345-1491911889:315479..315669TCONS_00019985-exon-sc0000345-1491911889:315479..315669Clytia hemisphaericaexon
TCONS_00019985-exon-sc0000345-1510915933:315479..315669TCONS_00019985-exon-sc0000345-1510915933:315479..315669Clytia hemisphaericaexon
TCONS_00019985-exon-sc0000345-1575043694:315479..315669TCONS_00019985-exon-sc0000345-1575043694:315479..315669Clytia hemisphaericaexon
TCONS_00019985-exon-sc0000345-1491911889:317035..317145TCONS_00019985-exon-sc0000345-1491911889:317035..317145Clytia hemisphaericaexon
TCONS_00019985-exon-sc0000345-1510915933:317035..317145TCONS_00019985-exon-sc0000345-1510915933:317035..317145Clytia hemisphaericaexon
TCONS_00019985-exon-sc0000345-1575043694:317035..317145TCONS_00019985-exon-sc0000345-1575043694:317035..317145Clytia hemisphaericaexon
TCONS_00019985-exon-sc0000345-1491911889:322024..322213TCONS_00019985-exon-sc0000345-1491911889:322024..322213Clytia hemisphaericaexon
TCONS_00019985-exon-sc0000345-1510915933:322024..322213TCONS_00019985-exon-sc0000345-1510915933:322024..322213Clytia hemisphaericaexon
TCONS_00019985-exon-sc0000345-1575043694:322024..322213TCONS_00019985-exon-sc0000345-1575043694:322024..322213Clytia hemisphaericaexon
TCONS_00019985-exon-sc0000345-1491911889:323609..324478TCONS_00019985-exon-sc0000345-1491911889:323609..324478Clytia hemisphaericaexon
TCONS_00019985-exon-sc0000345-1510915933:323609..324478TCONS_00019985-exon-sc0000345-1510915933:323609..324478Clytia hemisphaericaexon
TCONS_00019985-exon-sc0000345-1575043694:323609..324478TCONS_00019985-exon-sc0000345-1575043694:323609..324478Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000345supercontigsc0000345:311467..324478 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.604156	0.24673	0.17302	0.289099	3.1329	1.67521	4.20327	5.381	5.03407	12.3107	14.648	2.65411	7.12817	7.01296	0.32412	0.475915	0.59411	0.446561	1.1503	1.20866	2.14332	1.60444	1.38591	1.53652	18.5781	20.2982	2.44352	2.25291	4.76095	4.78217
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00019985 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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