TCONS_00019947 (transcript) - C. hemisphaerica

Overview
NameTCONS_00019947
Unique NameTCONS_00019947
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length142

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00019947 ID=TCONS_00019947|Name=TCONS_00019947|organism=Clytia hemisphaerica|type=transcript|length=142bp
AATTTTTGTGTCTCTTTcagtaaattgaaattttaaagaattatcaaaaa
tagtatGATTGGTTGGTTCAAATAACAACAATGGTTCAAATGGTGATTAT
GGTCTATACAGAAAAGAAAATATGGTGCGTGAAATGATCGCA
Run BLAST on NCBI

transcript from alignment at sc0000339:21337..21589-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00019947 ID=TCONS_00019947|Name=TCONS_00019947|organism=Clytia hemisphaerica|type=transcript|length=253bp|location=Sequence derived from alignment at sc0000339:21337..21589- (Clytia hemisphaerica)
AATTTTTGTGTCTCTTTCAGTAAATTGAAATTTTAAAGAATTATCAAAAA
TAGTATGATTGGTTGGTTCAAATAACAACAATGGTTCAAATGGTGATTAT
GGTCTATACAGAAAAGGTATGTAAATGTTTTCTTCCATTTGATAACCATT
ATCCTTTATATGATTCTTTTAAGTGACTTTCCAAAATAATGTTGCTTTCT
TATGACTTACCTGCTCATTTATTATAGAAAATATGGTGCGTGAAATGATC
GCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_011195XLOC_011195Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00019947-exon-sc0000339-1575043694:21474..21589TCONS_00019947-exon-sc0000339-1575043694:21474..21589Clytia hemisphaericaexon
TCONS_00019947-exon-sc0000339-1575043694:21337..21362TCONS_00019947-exon-sc0000339-1575043694:21337..21362Clytia hemisphaericaexon
TCONS_00019947-exon-sc0000339-1510915933:21474..21589TCONS_00019947-exon-sc0000339-1510915933:21474..21589Clytia hemisphaericaexon
TCONS_00019947-exon-sc0000339-1510915933:21337..21362TCONS_00019947-exon-sc0000339-1510915933:21337..21362Clytia hemisphaericaexon
TCONS_00019947-exon-sc0000339-1491911889:21474..21589TCONS_00019947-exon-sc0000339-1491911889:21474..21589Clytia hemisphaericaexon
TCONS_00019947-exon-sc0000339-1491911889:21337..21362TCONS_00019947-exon-sc0000339-1491911889:21337..21362Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000339supercontigsc0000339:21337..21589 -
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00019947 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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