TCONS_00019932 (transcript) - C. hemisphaerica

Overview
NameTCONS_00019932
Unique NameTCONS_00019932
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1856

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00019932 ID=TCONS_00019932|Name=TCONS_00019932|organism=Clytia hemisphaerica|type=transcript|length=1856bp
AATACCGATATACTTGAAAGAATCAATTTATTGCACAAACAACACAGGGG
TCAAACACCTTTACAAGCTGAACTTAACTTTTTGGAAATTGCCAAAAAGA
TTCCTAGATATGGAGTGGACGTACATGATGCCATGGATACCAATGGGCAT
GTAGAGATTGGTATTGCTGCTTTAGGAATAAACATCTATCGGGATGGAAA
GCGTGAACAGCTTTTCAGATGGCAAAATATGCATGACTTCAATTACAACC
GAAGAAAATTCACCATTAAACTCAAACAACCAGTGAGCGACAATGACAAT
AAGAAGAATTACGTATATTATTTCGAATCTGCTAAAAGCTGCAAACAATG
CTACAAAGTGGCTGTTGAATATCATTCTTTCTTCCGATTGACAAGACCTG
ATGCTCCACGAAAACGTGCTGACACCTTGAAAATGGGATCTAGCTTCAGA
TACAgTGATCGAACCTTGTATCAACTGAGATACCAAAAAGGTGATGAAGC
ACCTAAAAATGCTGCCAACTTCAAACGAACGCCAAGCACAAGGAAGACAT
TACCTCCTTCTTACAAAACACCGTTGATTGAACCTGAAGTGCCATTCATT
GAACCAACTAAAGTGGCACCACTTGAAGAAGAACCAGTCCACTATGAAGA
AGTACCAGTCCAATACGAAGAAGTAGAGTTCGATGAAGCCAATCCTGATG
ATGATAACTTTGATCCtgagGAATGGGAAACAGTTGAGAAGACGATGCCT
GATGGTTCGAAGAAGAAATCCCGTCGACGGGTCATCGTTCTTAATGTTGT
GAAGAAACCAAAGAGTGGGAAATCTCCAGTTGAAGAACCAGTTCAATATT
ATGAAGAAGTGGAAGTCGATGAAGCCAATCCTGATGATGATAAATTTGAT
CCTAAGGAATGGGAAACGGTCGAGAATACGATGCCTGATGGTTCGAAGAA
GAAATTCCGTAGACGTAATATCGTTCTTAATGTTGTGAAGAAACCAAAGA
TTGGGAAATCTCCAGTCGAAGAACCCATTCAATATAATGAAGAAGTGGAA
GTCGATGAAGCCAATCCTGATGATGATAAATATGATCCTGAGGAATGGGA
AACAGTCGAGAAGAAGATGCCTGATGGTTCAAAGAAAAAGTTCCGCCGAC
GAACCATTGTTCTTAATGTTGTGAAGAAACCAAAGAGTGGGAAATCTCCA
GTCGAGGAAGAACCAGTTCAATATGAAGAAGTGGAAGTTGATGAAGCAAA
TCCTGATGATGATAAATATGATCCTAAGGAATGGGAAACAGTCGAGAAGA
CGATGCCTGATGGTTCGAAGAAGAAATTCCGCCGACGAATTATTGTTCTT
AATGTTGTGAAGAAACCAAAGAGTGGGAAATCTCCAGTCGAGGAAGAACC
AGTTCAATATGAAGAAGTGGAAGTTGATGAAGCAAATCCTGATGATGATA
AATATGATCCTAAGGAATGGGAAACAGTCGAGAAGACGATGCCTGATGGT
TCGAAGAAGAAATTCCGCCGACGAATCATTGTTCTTAATGTTGTGAAGAA
ACCAAAGAGTGGAGATGAGGAGAAACCGTCAGAAGTCGACGAAGAACCCA
TCGAATATGAAGAAGTTGAAATTGATGAAGCCAACCCTCAAGATGATCAA
TTTGATCCAAAAgagTGGGAAGTTGTGGAGAAAGAAAAACCGAATGGCGA
CAAAGTACGCGTCAGACGGCGTCGTGTCGTCATTTTGAAGATCGTGAAGG
AGCCTGAAGATCTGGTGAATGAAAATGAAGTGACTGTCGAAGAAATGCCA
CTCAATGAAAATGCTCCAACACAAGAAGATGATGACAAGTTTGACCCTGA
GGTAAA
Run BLAST on NCBI

transcript from alignment at sc0000339:289794..298726+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00019932 ID=TCONS_00019932|Name=TCONS_00019932|organism=Clytia hemisphaerica|type=transcript|length=8933bp|location=Sequence derived from alignment at sc0000339:289794..298726+ (Clytia hemisphaerica)
AATACCGATATACTTGAAAGAATCAATTTATTGCACAAACAACACAGGta
ttcattttcttcatttttgattcAGTTCCAACCTTCTCTTGTACTTTTTT
CACTGGATAATGCAATGGATAGATGGATTTTACTTAAACTTCGCATAAAT
GTCTTCATAATAATTACTCTTACTTTTTTATTTAGGGGTCAAACACCTTT
ACAAGCTGAACTTAACTTTTTGGAAATTGCCAAAAAGATTCCTAGATATG
GAGTGGACGTACATGATGCCATGGTAGGTATTTTAAGAACAAAATGAAGT
TTAAGCAACCCAAACAACCTTTTAATGTCTTAAATGTAAGCTTATGTTCA
AATATTGAATGTTCTTTTTTTGTCTTTAGGATACCAATGGGCATGTAGAG
ATTGGTATTGCTGCTTTAGGAATAAACATCTATCGGGATGGAAAGCGTGA
ACAGCTTTTCAGATGGCAAAATATGCATGACTTCAATTACAACCGAAGAA
AATTCACCATTAAACTCAAACAACCAGTGGTACGTATGCTTTTCCTTTAG
CTGAAAGTAATTCTATTTTAATTTTGTAAAGCGTCACAtgtttctaaaat
attcagtaattttaaatgttttatttcaGAGCGACAATGACAATAAGAAG
AATTACGTATATTATTTCGAATCTGCTAAAAGCTGCAAACAATGCTACAA
AGTGGCTGTTGAATATCATTCTTTCTTCCGATTGACAAGACCTGATGCTC
CACGAAAACGTGCTGACACCTTGAAAATGGGATCTAGCTTCAGATACAgg
tataaaaaattgttttcacaaaatatttatttcaccACTAACTCCACTTC
TATCTCAACTAAAGTGAAAACATTGTCACTAAATCACTCAACTCAATTTT
TATGTTTCTAAATTAGAAGGTTGATTTaatgcatgttttttttataacaa
catccaaaaaattttaagccttcggaatcggatgttcttaactttttcat
ttttaagcctaagaatgttcttaaaatcttcttaatttctacattttttg
agtgtttttgtgcaattttgaaagaaatcgagtgttttagagcccatgaa
gccttaaaatgttgttaACTTGTTCTTACTTAACACTTTGGTCATCGAAT
ATGTTCTtatcttatatagtttgttcttattaaaaaagcgtgtatgttcT
TTCTTTTCAGTGATCGAACCTTGTATCAACTGAGATACCAAAAAGGTGAT
GAAGCACCTAAAAATGCTGCCAACTTCAAACGAACGCCAAGCACAAGGAA
GACATTACCTCCTTCTTACAAAACACCGTTGATTGAACCTGAAGTGCCAT
TCATTGAACCAACTAAAGGTAGTTTATTCTTCTTTGGAAATGTAAATTAA
TGCTTATTTCTGGTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNTTGTTTTCTTTAAGATTAAAATGCACAGAAGAAGTAATTGCTCAA
CTTGGTGCATATACTGCACAAggtaaatttgttttaaaacctTTGGCAAT
GTGTCATTATTTAATGTTTGTTTTTAGTCAATTGCACCCTGTCAACCAAA
GTTTAAAAGTCTTAACTgatatttttcaacatttaaaaaattgagattcC
AATACATATATAAAAGTATTTACTTGGGATAGTTAAGTCATGTTTATTAA
AacttatttgaaatttcaattgatattttttcagcTGAAGTAGGAGACTT
CAATTTATCAGAGCATGAGCATGATTACTTGAAAGATTATGAGTTTGCTG
AGGTAAGTAAAGTCTATACCAACAAATAACATGATTCCTTAAGCTGAAAT
CACCCTAAAGGAACTCTTTAAtgaaaaagtcattttcttACCATAGAATA
CCGATATACTTGAAAGAATCAATTTATTGCACAAACAACACAGGtattca
ttttcttcatttttgattcAGTTCCAACCTTCTCTTGTACTTTTTTCACT
GGATAATGCAATGGATAGATGGATTTTACTTAAACTTCGCATAAATGTCT
TCATAATAATTACTCTTACTTTTTTATTTAGGGGTCAAACACCTTTACAA
GCTGAACTTAACTTTTTGGAAATTGCCAAAAAGATTCCTAGATATGGAGT
GGACGTACATGATGCCATGGTAGGTATTTTAAGAACAAATGAAGTTTAAG
CAACCCAAACAACCTTTTAATGTCTTAAATGTAAGCTTATGTTCAAATAT
taaatgttctttttttgtCTTTAGGATACCAATGGGCATGTAGAGATTGG
TATTGCTGCTTTAGGAATAAACATCTATCGGGATGGAAAGCGTGAACAGC
TTTTCAGATGGCAAAATATGCATGACTTCAATTACAACCGAAGAAAATTC
ACCATTAAACTCAAACAACCAGTGGTACGTATGCTTTTCCTTTAGCTGAA
AGTAATTCTATTTTAATTTTGTAAAGCGTCACATGTTTCTAAAACATTCa
gtaattttaaatgttttatttcaGAGCGACAATGACAATAAGAAGAATTA
CGTATATTATTTCGAATCTGCTAAAAGCTGCAAACAATGCTACAAAGTGG
CTGTTGAATATCATTCTTTCTTCCGATTGACAAGACCTGATGCTCCACGA
AAACGTGCTGACACCTTGAAAATGGGATCTAGCTTCAGATACAggtataa
aaaattgttttcacaaaatatttatttcaccACTAACTCCACTTCTATCT
CAACTAAAGTGAAAACATTGTCACTAAATCACTCAACTCAATTTTTATGT
TTCTAAATTAGAAGGTTGATTTaatgcatgttttttttataacaacatcc
aaaaattttaagcTTTCGGAATCGgatcttcttaactttttcagttttaa
gcctaagaatgttcttaaaatcttcttaatttctacattttttgagtgtt
tttgtgcaattttgaaagaaatcgagtgttttagagcccatgaagcctta
aaatgttgttaACTTGTTCTTACTTAACACTTTGGTCATCGAATATGTTC
TtatcttatatagtttgttcttattaaaaaagcgtgtatgttcTTTCTTT
TCAGTGATCGAACCTTGTATCAACTGAGATACCAAAAAGGTGATGAAGCA
CCTAAAAATGCTGCCAACTTCAAACGAACGCCAAGCACAAGGAAGACATT
ACCTCCTTCTTACAAAACACCGTTGATTGAACCTGAAGTGCCATTCATTG
AACCAACTAAAGGTAGTTTATTCTTCTTTGGAAATGTAAATTAATGCTTA
TttctggtttttacacaaaaaattGTGGTTGGAATATATGTCTGGAGACT
GAAGActaaattttcaaatctttttccttTAGTGGCACCACTTGAAGAAG
AACCAGTCCACTATGAAGAAGTACCAGTCCAATACGAAGAAGTAGAGTTC
GATGAAGCCAATCCTGATGATGATAACTTTGATCCtgaggtattttttat
tttggggAGCCTTTCGATGCTATTCTACAGTTTACTACAGTTGAATTAGT
TCAGTTTTTTTtgctggaaatttttttatcttttcgtTTTATGAGAAACT
TGGATTCATAAGAAACTTGAAGAACTTTTTATTAAATCTTCAAAGTCATT
GAAAACTTTATCACTTTCCTCTAGGAATGGGAAACAGTTGAGAAGACGAT
GCCTGATGGTTCGAAGAAGAAATCCCGTCGACGGGTCATCGTTCTTAATG
TTGTGAAGAAACCAAAGAGTGGGAAATCTCCAGTTGAAGAACCAGTTCAA
TATTATGAAGAAGTGGAAGTCGATGAAGCCAATCCTGATGATGATAAATT
TGATCCTAAGGTATATTGTTAGCACAGAATTTCCTTTTCCGAAATCTTCA
GTGTGACCTGAAGATCTGGAAAACGAtaagattttgctgaaattttgcct
ACTCTGACatgtcttttttttcctttNCGGATTTGGCTTATATTTTGCGC
ACTCTGACATGTCTCTATtcctttttttgcttgagacgAGCTTTGTACGA
TAGCTTCGCGTTCTTATCAATTTATAATATACTAAATTTAAGCCCATTCG
ACTATGAAATAAAAAGTTGCCAATGTCTTTCATCTGCTTTCACTGCATTT
TGAACTCAATCAACTTCACTTACTTTCGTCTTCTTCAGGAATGGGAAACG
GTCGAGAATACGATGCCTGATGGTTCGAAGAAGAAATTCCGTAGACGTAA
TATCGTTCTTAATGTTGTGAAGAAACCCAAGAGTGGGAAATCTCTAGTCG
AAGAACCAGTTCAATATTATGAAGAAGTGGAAGTTGATGAAGCCAATCCT
GATGATGATAAATTTGATCCTAAGGTATCGTTAGCAcagaatttcttttt
tctaaaaacatcGGGGTGACCTGGAGATTGGGGGAACGATCGGATTTGGC
TTATATTTTGCGCACTCTGACATGTCTCTATtcctttttttgcttgagac
gAGCTTTGTACGATAGCTTCGCGTTCTTATCAATTTATAATATACTAAAT
TTAAGCCCATTCGACTATGAAATAAAAAGTTGCCAATGTCTTTCATCTGC
TTTCACTGCATTTTGAACTCAATCAACTTCACTTACTTTCGTCTTCTTCA
GGAATGGGAAACGGTCGAGAATACGATGCCTGATGGTTCGAAGAAGAAAT
TCCGTAGACGTAATATCGTTCTTAATGTTGTGAAGAAACCCAAGAGTGGG
AAATCTCTAGTCGAAGAACCAGTTCAATATTATGAAGAAGTGGAAGTTGA
TGAAGCCAATCCTGATGATGATAAATTTGATCCTAAGGTATCGTTAGCAc
agaatttcttttttctaaaaacatcGGGGTGACCTGGAGATTCGGAGAAC
GATCGCATTTGGCTGAAGTTTTGCGCACTCTGACATgtctctatttcttt
ttttgcttgagacgAGCTTTGTACGATAGCTTCGCGTTCTTAGTTATtga
gaaaatattgaatttaagCCCATTCGACTATGAAATAAGTTGTCAATGTC
TTTCACTGCAATATGAAGTCACTCAACTTCacttactttcgttttcttca
gGAATGGGAAACGGTCGAGAATACGATGCCTGATGGTTCGAAGAAGAAAT
TCCGTAGACGTAATATCGTTCTTAATGTTGTGAAGAAACCAAAGATTGGG
AAATCTCCAGTCGAAGAACCAGTTCAATATAATGAAGAAGTAGAGTTCGA
TGAAGCCAATCCTGATGATGATAAATATGATCCTGAGGTATTTTTTATTT
GGGGAAAGCctttcaatgcaattttacaGGTGACGAGTTCAGTATTTTTT
GCTGGAATTTTTTACGTCTTTTcgttttataagaaatttttcaaaatcat
tttaaactTTCTCATTTTCCTCTAGGAATGGGAAACAGTCGAGAAGAAGA
TGCCTGATGGTTCAAAGAAGAAATTCCGCCGACGAATTATTGTTCTTAAT
GTTGTGAAGAAACAAAAGAGTGGGAAATCTCCAGTCGAGGAAGAACCAGT
TCAATATGAACAAGTGGAAGTTGATGAAGCCAATCCTGATGATGATAAAT
TTGATCCTAAGGTATCGTTAGCAcagaatttcttttttctaaaaacatcG
GGGTGACCTGGAGATTCGGAGAACGATCGCATTTGGCTGAAGTTTTGCGC
ACTCTGACATgtctctatttctttttttgcttgagacgAGCTNGGGGGAA
CGATCGGATTTGGCTTATATTTTGCGCACTCTGACATGTCTCTATtcctt
tttttgcttgagacgAGCTTTGTACGATAGCTTCGCGTTCTTATCAATTT
ATAATATACTAAATTTAAGCCCATTCGACTATGAAATAAAAAGTTGCCAA
TGTCTTTCATCTGCTTTCACTGCATTTTGAACTCAATCAACTTCACTTAC
TTTCGTCTTCTTCAGGAATGGGAAACAGTCGAGAATACGATGCCTGATGG
TTCGAAGAAGAAATTCCGTAGACGTAATATCGTTCTTAATGTTGTGAAGA
AACCCAAGAGTGGGAAATCTCTAGTCGAAGAACCAGTTCAATATTATGAA
GAAGTGGAAGTTGATGAAGCCAATCCTGATGATGATAAATTTGATCCTAA
GGTATCGTTAGCAcagaatttcttttttctaaaaacatcGGGGTGACCTG
GAGATTCGGAGAACGATCGCATTTGGCTGAAGTTTTGCGCACTCTGACAT
gtctctatttctttttttgcttgagacgAGCTTTGTACGATAGCTTCGCG
TTCTTAGTTATtgagaaaatattgaatttaagCCCATTCGACTATGAAAT
AAAAAGTTGCCAATGTCTTTCACCTGCTTTCACTGCAATATGAAGTCACT
CAACTTCacttactttcgttttcttcagGAATGGGAAACGGTCGAGAATA
CGATGCCTGATGGTTCGAAGAAGAAATTCCGTAGACGTAATATCGTTCTT
AATGTTGTGAAGAAACCAAAGATTGGGAAATCTCCAGTCGAAGAACCCAT
TCAATATAATGAAGAAGTGGAAGTCGATGAAGCCAATCCTGATGATGATA
AATATGATCCTGAGGTATGTTTTTTTTGGGGAAAcctttcactgaaattt
caggCAATTTTACAGTTTGCAGGTGACGAGTTCAGTATTTTTGCTGGAAT
TTTTTACGTctctttgttttataagaaacttttcaaaatcattttaaact
TTCTCATTTTCCTCTAGGAATGGGAAACAGTCGAGAAGAAGATGCCTGAT
GGTTCAAAGAAAAAGTTCCGCCGACGAACCATTGTTCTTAATGTTGTGAA
GAAACCAAAGAGTGGGAAATCTCCAGTCGAGGAAGAACCAGTTCAATATG
AAGAAGTGGAAGTTGATGAAGCAAATCCTGATGATGATAAATATGATCCT
AAGGTATAGTTAGCACAGAATTTCTTTCTCTCTCTCACTTTAAAGCCAAT
ATTGTGCATCTCCGAGTCATTTGATGTTTTTCAGGTCTCAAACGAGCCAG
GTCTACTCAAAtttacattatttttcaaatatctcCTCTAGGAATGGGAA
ACAGTCGAGAAGACGATGCCTGATGGTTCGAANGTTGTCAATGTCTTTCA
CTGCAATATGAAGTCACTCAACTTCacttactttcgttttcttcagGAAT
GGGAAACGGTCGAGAATACGATGCCTGATGGTTCGAAGAAGAAATTCCGT
AGACGTAATATCGTTCTTAATGTTGTGAAGAAACCAAAGATTGGGAAATC
TCCAGTCGAAGAACCCATTCAATATAATGAAGAAGTGGAAGTCGATGAAG
CCAATCCTGATGATGATAAATATGATCCTGAGGTATGTTTTTTTTGGGGA
AAcctttcactgaaatttcaggCAATTTTACAGTTTGCAGGTGACGAGTT
CAGTATTTTTGCTGGAATTTTTTACgtctttttgttttataagaaacttt
tcaaaatcattttaaactTTCTCATTTTCCTCTAGGAATGGGAAACAGTC
GAGAAGAAGATGCCTGATGGTTCAAAGAAGAAATTCCGCCGACGAACCAT
TGTTCTTAATGTTGTGAAGAAACCAAAGAGTGGGAAATCTCCAGTCGAGG
AAGAACCAGTTCAATATGAAGAAGTGGAAGTTGATGAGGCAAATCCTGAT
GATGATAAATTTGATCCTAAGGTATTGTTTGCACAGAAtttctttctctc
tctctcacTTTAAAGCCAATATTGTGCATCTCCGAGTCATTTGATGTTTT
TCAGGTCTCAAACGAGCCAGATCTACTcaaatttacaatatttttcaaat
atctcCTCTAGGAATGGGAAACAGTCGAGAAGACGATGCCTGATGGTTCG
AAGAAGAAATTCCGCCGACGAATTATTGTTCTTAATGTTGTGAAGAAACC
AAAGAGTGGGAAATCTCCAGTCGAGGAAGAACCAGTTCAATATGAAGAAG
TGGAAGTTGATGAAGCAAATCCTGATGATGATAAATATGATCCTAAGGTA
TAGTTAGCACAGAATTTCTTTCTCTCTCTCACTTTAAAGCCAATATTGTG
CATCTCCGAGTCATTTGATGTTTTTCAGGTCTCAAACGAGCCAGGTCTAC
TCAAAtttacattatttttcaaatatctcCTCTAGGAATGGGAAACAGTC
GAGAAGACGATGCCTGATGGTTCGAAGAAGAAATTCCGCCGACGAATCAT
TGTTCTTAATGTTGTGAAGAAACCAAAGAGTGGAGATGAGGAGAAACCGT
CAGAAGTCGACGAAGAACCCATCGAATATGAAGAAGTTGAAATTGATGAA
GCCAACCCTCAAGATGATCAATTTGATCCAAAAGTAAATAATTGATGTGA
CTTTCTTCAGTTTCTCTTACTTCATTACCTATGCCACATTTTGACATCTT
gttttttacaatttcttaacTTAACTTGATACATCACATTTTAGGCTTCC
CAggcagtcacaacttaaccatcttttaattttttttaggagTGGGAAGT
TGTGGAGAAAGAAAAACCGAATGGCGACAAAGTACGCGTCAGACGGCGTC
GTGTCGTCATTTTGAAGATCGTGAAGGAGCCTGAAGATCTGGTGAATGAA
AATGAAGTGACTGTCGAAGAAATGCCACTCAATGAAAATGCTCCAACACA
AGAAGATGATGACAAGTTTGACCCTGAGGTAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_011193XLOC_011193Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00019932-exon-sc0000339-1491911889:289794..289840TCONS_00019932-exon-sc0000339-1491911889:289794..289840Clytia hemisphaericaexon
TCONS_00019932-exon-sc0000339-1510915933:289794..289840TCONS_00019932-exon-sc0000339-1510915933:289794..289840Clytia hemisphaericaexon
TCONS_00019932-exon-sc0000339-1575043694:289794..289840TCONS_00019932-exon-sc0000339-1575043694:289794..289840Clytia hemisphaericaexon
TCONS_00019932-exon-sc0000339-1491911889:289979..290066TCONS_00019932-exon-sc0000339-1491911889:289979..290066Clytia hemisphaericaexon
TCONS_00019932-exon-sc0000339-1510915933:289979..290066TCONS_00019932-exon-sc0000339-1510915933:289979..290066Clytia hemisphaericaexon
TCONS_00019932-exon-sc0000339-1575043694:289979..290066TCONS_00019932-exon-sc0000339-1575043694:289979..290066Clytia hemisphaericaexon
TCONS_00019932-exon-sc0000339-1491911889:290173..290322TCONS_00019932-exon-sc0000339-1491911889:290173..290322Clytia hemisphaericaexon
TCONS_00019932-exon-sc0000339-1510915933:290173..290322TCONS_00019932-exon-sc0000339-1510915933:290173..290322Clytia hemisphaericaexon
TCONS_00019932-exon-sc0000339-1575043694:290173..290322TCONS_00019932-exon-sc0000339-1575043694:290173..290322Clytia hemisphaericaexon
TCONS_00019932-exon-sc0000339-1491911889:292518..292687TCONS_00019932-exon-sc0000339-1491911889:292518..292687Clytia hemisphaericaexon
TCONS_00019932-exon-sc0000339-1510915933:292518..292687TCONS_00019932-exon-sc0000339-1510915933:292518..292687Clytia hemisphaericaexon
TCONS_00019932-exon-sc0000339-1575043694:292518..292687TCONS_00019932-exon-sc0000339-1575043694:292518..292687Clytia hemisphaericaexon
TCONS_00019932-exon-sc0000339-1491911889:293098..293255TCONS_00019932-exon-sc0000339-1491911889:293098..293255Clytia hemisphaericaexon
TCONS_00019932-exon-sc0000339-1510915933:293098..293255TCONS_00019932-exon-sc0000339-1510915933:293098..293255Clytia hemisphaericaexon
TCONS_00019932-exon-sc0000339-1575043694:293098..293255TCONS_00019932-exon-sc0000339-1575043694:293098..293255Clytia hemisphaericaexon
TCONS_00019932-exon-sc0000339-1491911889:293376..293482TCONS_00019932-exon-sc0000339-1491911889:293376..293482Clytia hemisphaericaexon
TCONS_00019932-exon-sc0000339-1510915933:293376..293482TCONS_00019932-exon-sc0000339-1510915933:293376..293482Clytia hemisphaericaexon
TCONS_00019932-exon-sc0000339-1575043694:293376..293482TCONS_00019932-exon-sc0000339-1575043694:293376..293482Clytia hemisphaericaexon
TCONS_00019932-exon-sc0000339-1491911889:293668..293853TCONS_00019932-exon-sc0000339-1491911889:293668..293853Clytia hemisphaericaexon
TCONS_00019932-exon-sc0000339-1510915933:293668..293853TCONS_00019932-exon-sc0000339-1510915933:293668..293853Clytia hemisphaericaexon
TCONS_00019932-exon-sc0000339-1575043694:293668..293853TCONS_00019932-exon-sc0000339-1575043694:293668..293853Clytia hemisphaericaexon
TCONS_00019932-exon-sc0000339-1491911889:296422..296607TCONS_00019932-exon-sc0000339-1491911889:296422..296607Clytia hemisphaericaexon
TCONS_00019932-exon-sc0000339-1510915933:296422..296607TCONS_00019932-exon-sc0000339-1510915933:296422..296607Clytia hemisphaericaexon
TCONS_00019932-exon-sc0000339-1575043694:296422..296607TCONS_00019932-exon-sc0000339-1575043694:296422..296607Clytia hemisphaericaexon
TCONS_00019932-exon-sc0000339-1491911889:296761..296946TCONS_00019932-exon-sc0000339-1491911889:296761..296946Clytia hemisphaericaexon
TCONS_00019932-exon-sc0000339-1510915933:296761..296946TCONS_00019932-exon-sc0000339-1510915933:296761..296946Clytia hemisphaericaexon
TCONS_00019932-exon-sc0000339-1575043694:296761..296946TCONS_00019932-exon-sc0000339-1575043694:296761..296946Clytia hemisphaericaexon
TCONS_00019932-exon-sc0000339-1491911889:297855..298040TCONS_00019932-exon-sc0000339-1491911889:297855..298040Clytia hemisphaericaexon
TCONS_00019932-exon-sc0000339-1510915933:297855..298040TCONS_00019932-exon-sc0000339-1510915933:297855..298040Clytia hemisphaericaexon
TCONS_00019932-exon-sc0000339-1575043694:297855..298040TCONS_00019932-exon-sc0000339-1575043694:297855..298040Clytia hemisphaericaexon
TCONS_00019932-exon-sc0000339-1491911889:298179..298376TCONS_00019932-exon-sc0000339-1491911889:298179..298376Clytia hemisphaericaexon
TCONS_00019932-exon-sc0000339-1510915933:298179..298376TCONS_00019932-exon-sc0000339-1510915933:298179..298376Clytia hemisphaericaexon
TCONS_00019932-exon-sc0000339-1575043694:298179..298376TCONS_00019932-exon-sc0000339-1575043694:298179..298376Clytia hemisphaericaexon
TCONS_00019932-exon-sc0000339-1491911889:298533..298726TCONS_00019932-exon-sc0000339-1491911889:298533..298726Clytia hemisphaericaexon
TCONS_00019932-exon-sc0000339-1510915933:298533..298726TCONS_00019932-exon-sc0000339-1510915933:298533..298726Clytia hemisphaericaexon
TCONS_00019932-exon-sc0000339-1575043694:298533..298726TCONS_00019932-exon-sc0000339-1575043694:298533..298726Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000339supercontigsc0000339:289794..298726 +
Expression
No biomaterial libraries express this feature.
Blast
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BLAST of TCONS_00019932 vs. Swiss-Prot (Human)
Match: E41L3 (Band 4.1-like protein 3 OS=Homo sapiens GN=EPB41L3 PE=1 SV=2)

HSP 1 Score: 125.176 bits (313), Expect = 1.267e-29
Identity = 71/175 (40.57%), Postives = 102/175 (58.29%), Query Frame = 1 
Query:   31 LHKQHRGQTPLQAELNFLEIAKKIPRYGVDVHDAMDTNG-HVEIGIAALGINIYRDGKREQLFRWQNMHDFNYNRRKFTIKLKQPVSDNDNKKNYVYYFESAKSCKQCYKVAVEYHSFFRLTRPDAPRKRADTLKMGSSFRYSDRTLYQLRYQKGDEAPKNAANFKRTPSTRKTL 552
            LHK HRG TP +AE++FLE AKK+  YGVD+H A D+ G  + +G+ A G+ IYRD  R   F W  +   +Y R  F IK++ P      +    +   + ++ K+ +KV VE+H+FFRL  P+AP K+   L +GS FRYS RT  Q R +      + A  F+R+ S R T+
Sbjct:  270 LHKSHRGMTPAEAEMHFLENAKKLSMYGVDLHHAKDSEGVEIMLGVCASGLLIYRDRLRINRFAWPKVLKISYKRNNFYIKIR-PGEFEQFESTIGFKLPNHRAAKRLWKVCVEHHTFFRLLLPEAPPKKF--LTLGSKFRYSGRTQAQTR-RASALIDRPAPYFERSSSKRYTM 440
The following BLAST results are available for this feature:
BLAST of TCONS_00019932 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
E41L31.267e-2940.57Band 4.1-like protein 3 OS=Homo sapiens GN=EPB41L3... [more]
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