TCONS_00019850 (transcript) - C. hemisphaerica

Overview
NameTCONS_00019850
Unique NameTCONS_00019850
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length185

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00019850 ID=TCONS_00019850|Name=TCONS_00019850|organism=Clytia hemisphaerica|type=transcript|length=185bp
TTTTGGAATCGGATGAAGCAAATCCTGCACGGTGCTCAAAAGAACACAAT
CTTTTCAGTACCGAGAAGAATACAACCCATTACCGATTAGCCATCAACAC
GTTGACATACATGTTAGAAGACGATTGTAAGAAAGTGCCAATTCATTATG
ATGAcataaaaaggtaaaaataataGAAGTCTTAG
Run BLAST on NCBI

transcript from alignment at sc0000338:68882..69066

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00019850 ID=TCONS_00019850|Name=TCONS_00019850|organism=Clytia hemisphaerica|type=transcript|length=185bp|location=Sequence derived from alignment at sc0000338:68882..69066 (Clytia hemisphaerica)
CTAAGACTTCtattatttttacctttttatgTCATCATAATGAATTGGCA
CTTTCTTACAATCGTCTTCTAACATGTATGTCAACGTGTTGATGGCTAAT
CGGTAATGGGTTGTATTCTTCTCGGTACTGAAAAGATTGTGTTCTTTTGA
GCACCGTGCAGGATTTGCTTCATCCGATTCCAAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_011169XLOC_011169Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00019850-exon-sc0000338-1491911889:68882..69066TCONS_00019850-exon-sc0000338-1491911889:68882..69066Clytia hemisphaericaexon
TCONS_00019850-exon-sc0000338-1510915933:68882..69066TCONS_00019850-exon-sc0000338-1510915933:68882..69066Clytia hemisphaericaexon
TCONS_00019850-exon-sc0000338-1575043694:68882..69066TCONS_00019850-exon-sc0000338-1575043694:68882..69066Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000338supercontigsc0000338:68882..69066 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00019850 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top