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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00019821 ID=TCONS_00019821|Name=TCONS_00019821|organism=Clytia hemisphaerica|type=transcript|length=1160bp
TTCTATTTGAAAACTTATGACTTAACTTAAGTCGGtagaagtgaagaaaa
aaaacattaaaactttACCACTTTTACTTAGAGGGATGTTATTAGCATCC
AAAGGTAGACTTACAGAGTAACATACCTGCAATGTTTCGTTATAATAAGa
taaatcatttaaaaaattacattaTACAAAGTAAGGGCAATTGACACAAT
TGACTTAAAATACGGAAGTGCCATTTAGATTCTcctttaattttttaacg
acGAAACTAACAAATTGACAACGGAAATAAAAATTGACGacgaaactgaa
aataaattgttaCTTTGTTTCGTTGTCGAAAAAATTGACAacgaaactga
aaataaattgttacttcgtttcgtcgtcgaaaaaaatcaacaaggaaact
aaaaaatatttgagaatGGTGGCCCTGATGGTTGAAAAAAGGAAATATCA
CTAATTCTGGTGGGTTATGAAGAGGGATTTGATAgctctggtgaatgcaa
tgctGGTGGAGATGGTTCTAGTGAATGAGATACTGGCACTGATGAACTAG
AATAAAGATGTGATGGTGGAGATTGTTGGAGTCACCGGGGTGTCAATGGA
ATCATTGGAACTAATCAATAGCagatgatggaatcaatggagcAGATGAT
GGAATCAAAGTTGTAGCATGATGAGATGATGAAATCCATccatttatttc
atcattgattagtTCCAATGATTTCATTGACACCCCGGTGACTCCAACAA
TCTCCACCATCACATCTTTATTCTGGTTCATTATTGCCAGCATCTCATTC
ACAAGAACCATCTTCACCagcattgcattcaccagagcTATCAAATCCCT
CTTCAGACTCCACCAGAATCAATGATATTTCCATTTTTCAACCATAAGGA
CcaccattttcattttttttttagtttcggTCGATTTTTTCGACGACGAA
AAGAAGTAACgatttattttcagtttcgtcgtcaatttttttagtttcgt
cTTTAAAAAACTAAAGGAAAATCTAAATGATACTAATGTACGGAAGCCCA
TTGGTGCCATTTAGATTCTCCTTTAATTTTTTAACATCATTGCCAGCATT
CACCAGAACTATCAAATCCATCTTCATAACCCACCAGAATCAATGATATT
TCCATTTTTC Run BLAST on NCBI transcript from alignment at sc0000336:286546..287705 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00019821 ID=TCONS_00019821|Name=TCONS_00019821|organism=Clytia hemisphaerica|type=transcript|length=1160bp|location=Sequence derived from alignment at sc0000336:286546..287705 (Clytia hemisphaerica)
GAAAAATGGAAATATCATTGATTCTGGTGGGTTATGAAGATGGATTTGAT
AGTTCTGGTGAATGCTGGCAATGATGTTAAAAAATTAAAGGAGAATCTAA
ATGGCACCAATGGGCTTCCGTACATTAGTATCATTTAGATTTTCCTTTAG
TTTTTTAAAgacgaaactaaaaaaattgacgacgaaactgaaaataaatc
GTTACTTCTTTTCGTCGTCGAAAAAATCGAccgaaactaaaaaaaaaatg
aaaatggtgGTCCTTATGGTTGAAAAATGGAAATATCATTGATTCTGGTG
GAGTCTGAAGAGGGATTTGATAgctctggtgaatgcaatgctGGTGAAGA
TGGTTCTTGTGAATGAGATGCTGGCAATAATGAACCAGAATAAAGATGTG
ATGGTGGAGATTGTTGGAGTCACCGGGGTGTCAATGAAATCATTGGAact
aatcaatgatgaaataaatggATGGATTTCATCATCTCATCATGCTACAA
CTTTGATTCCATCATCTgctccattgattccatcatctGCTATTGATTAG
TTCCAATGATTCCATTGACACCCCGGTGACTCCAACAATCTCCACCATCA
CATCTTTATTCTAGTTCATCAGTGCCAGTATCTCATTCACTAGAACCATC
TCCACCagcattgcattcaccagagcTATCAAATCCCTCTTCATAACCCA
CCAGAATTAGTGATATTTCCTTTTTTCAACCATCAGGGCCACCattctca
aatattttttagtttccttgttgatttttttcgacgacgaaacgaagtaa
caatttattttcagtttcgtTGTCAATTTTTTCGACAACGAAACAAAGta
acaatttattttcagtttcgtCGTCAATTTTTATTTCCGTTGTCAATTTG
TTAGTTTCgtcgttaaaaaattaaaggAGAATCTAAATGGCACTTCCGTA
TTTTAAGTCAATTGTGTCAATTGCCCTTACTTTGTAtaatgtaatttttt
aaatgatttatCTTATTATAACGAAACATTGCAGGTATGTTACTCTGTAA
GTCTACCTTTGGATGCTAATAACATCCCTCTAAGTAAAAGTGGTaaagtt
ttaatgttttttttcttcacttctaCCGACTTAAGTTAAGTCATAAGTTT
TCAAATAGAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00019821-exon-sc0000336-1491911889:286546..287705 | TCONS_00019821-exon-sc0000336-1491911889:286546..287705 | Clytia hemisphaerica | exon |
| TCONS_00019821-exon-sc0000336-1510915933:286546..287705 | TCONS_00019821-exon-sc0000336-1510915933:286546..287705 | Clytia hemisphaerica | exon |
| TCONS_00019821-exon-sc0000336-1575043694:286546..287705 | TCONS_00019821-exon-sc0000336-1575043694:286546..287705 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000336 | supercontig | sc0000336:286546..287705 . |
Blast
The following BLAST results are available for this feature:
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