TCONS_00019789 (transcript) - C. hemisphaerica

Overview
NameTCONS_00019789
Unique NameTCONS_00019789
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2242

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00019789 ID=TCONS_00019789|Name=TCONS_00019789|organism=Clytia hemisphaerica|type=transcript|length=2242bp
TTCACAAACTGCAAATCTATTTTAATTGTTGGTGATTTAAGATAATAAGG
ATAGTAATTGATTAAATACTGAAGCCTTTTGAAATGATAGCAGTCCAGAG
CCAAAGGACTTTCATACTTGCCACAGCAGTTGGAGCCACTCTAGGATTGG
GATTATACTATCTTCGATCTCGAAAAGAAAGAaatgctaaaattcaaaaa
cgaGTAGATAAAATTcttgaaattttgaatcaaGACTTCTGTCATTTCAA
AGATCCAGTAGCCATTAAGGAAAAAATACGAGCTTTTGTGACAGCTGGTG
CACAAGGTGTCCAGATTGTCGCAGATTTTGATCGTACCCTGACAAAGGCT
TTTGTTGATGGCCAGCCTGCTCATGCTAGCTATGGTGTCATTGACGATTC
ATCATATATCCCTGAAACTGCCGTCCAGGAGctAAATGCATTAAAAGCAA
AATACTTTCCAATCGAAATGTCAACGGCATTAACTGAGGCTGAAAAACTA
CCACACATGATTCAATGGTACAACTCTTCTTTTCAAGTAGCAATCAAAGC
TGGAATCAAAAGGCACATGCTCCCTGCTATGGTTAGAGAAAGTAGTGTTC
AACTTAGGGATGGATCTGACCAGTTTTTCCACTTGGTCACTGAAAATAAG
ACTCCAATATTTATTCTATCAGCTGGTGTAGGAGATGTGATTGAAGAAAT
TATGAAACAGCAAGCAGAAATACCTCCACAATTGAAACTTGTGGCTAACT
ATTACTCCTATGACAGCAATGGGACAATGAACGGTAGGGATGGTGAACTA
ATTCACACTTTCAACAAACATGAAACCTCTCATAAAAGCAAAGATTATTT
CCACTCTATCAAGCAATGTAAGAATGTTTTGGTGATGGGAGATACTTTAG
GTGATCCAGTGATGGCCGATGGCATTGATCACATGACAGCTTGCATCAAA
ATCGGCTTCCTAAACAAGGACgTTGAGGAGTCATTGAGCGCTTATTTATC
AGTCTACGATATTGTTCTTGCACATGATGCAGACATGGACCTTATAAATC
TGATGTTACGTGAAATAGTCAAAGATTAAGAATAAGTTTTCCAAATTCCA
AGTTCCAATATTGTAGTTAGCACGAGAAGAaggttttttccaattttagc
attttccaatttttaagaGAATTTTGTCAATTATTTTGTACAGCCTCTAA
TTATTGGCTTAATTACACCAAGCTGGTATGTAGTAAACAACAGTtacttt
aaaattatttttacacaCAAGCCACTTTGTTTCAAGGCTTCATAGCATCG
CATAAAAACTAATGGGAAATTCAACTATTTTAAAAAAGGGTGTCTTTTAA
CTGAAATAAAGTCATGTCGTTGAaaggttttgtttaaaaagttgTCTCTC
CTTAACCTTTGCTGGTTATATTAAGTTGCATATATATTATACCATTATTT
AATGAACATATAGTTACTTTATTTGGTATGTTATTTTTTACAATTTGCAG
TTTTATATTTCTACGAAACTGTTCAATTGATTTTTCGCAAACTTTTAAAT
GACTCGCTGTAGACTATTATATGCCAATTTTCCAAAAGATTCGCCTATAG
TAATATAGTCAAATCTTTcttattcgaacctctataactctctattattt
ttgtaattcaaaCTTACCCCCAAGTGAAAGGTAGTGTAAAATGCCCTCTA
CGATTCGAATAATAGGGCCTaataaagatcgaattagagagagatgGCAA
CCGTAGTCAAAAAGACAAAACTCTTCAGAAATGGTTAGAATTTGAGTATT
ATcacattgaaaaatatatatcttatcggaattttcgatttttctaaaac
agcgatgcattgtgggattgtttcgggggtattacaatagaatttccttg
aggaattcctaagagatttcgaTTGTAATGCCCCCGAAACAattccacaa
tgcatcgcttttttagaaaNCGGAGAAAAGGTAGAGAAAAACACTGAATC
AAGATGGCGACCAAGAAATGGGTTTTTCCAACTTACTGCTAAAGTTCTTG
gattttttgactggtttaggccatttttcttcatggaaacattgttttta
taatggcaaaacatccagtaagtatatcttatattttgagttctgttttt
agcataaaaaatccatttatttgtcattttgaccacttttctcGACAAAC
CATCGGAGTCGACCCAAACTTAcagtactttttactttttat
Run BLAST on NCBI

transcript from alignment at sc0000336:291493..307442+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00019789 ID=TCONS_00019789|Name=TCONS_00019789|organism=Clytia hemisphaerica|type=transcript|length=15950bp|location=Sequence derived from alignment at sc0000336:291493..307442+ (Clytia hemisphaerica)
TTCACAAACTGCAAATCTATTTTAATTGTTGGTGTAGGTATATATCTTTG
TTGAAtgtcttttttctattttttcattcttctttattttgttttgtatc
TTATGTATTTATGGTCGTCAAAAAGTGGGGGGCATCCGAGGGTCTTAAAT
CTGAAATCCTGAAACCCCgttaaatttttggaaagatCCTGAAATCCCGT
TGATATTTGAATACCAGCATCTTtgtccattttctgaaaaaaattggcCA
TTTTAGAGTCCGAAAAGCCCTACAATATGCAGatatgttcttagcttgtt
cttaatattttggccatcgaaaaaCTTTTGGGAATCGTTCTGCAATAAAG
tttccaaaaagtttgtttgtaTTATTTTCTTGTCGGCTCGTCGAAGCCTG
ATTGGAAGCTGCTCTAAAAGTGAAAAGACCAGGTGTACCCAATCGATGAA
ATCGATACGGGAAATcaatcgatattaatcgattttaatcgaaAATAATC
GATATAGTGATCGATTTAactaatcgataaacaatcgatagCCAATCGAT
ACTAAGACGTCATGTTCTTCTCGATTGGATTTGATTGTTATCGACTGCTA
TCAATTAATCGCTGATTGCTTTTGATTGTTATCGATTTCTTTATATTCGC
AACCCTAccgtggtttttctaatttaacgcgtggcaataaataattattt
tgcaaactgcaaaaaactcatttttatcCCGCTTTTCCGGGACTTCAGCT
AAAGTGCTGGcctgcagcatagggtacaaagtccaaatatgtgtttcccg
taatttttgtacgaagagttaggtctacactgagaGGAGGATGACAAAGA
TCCctttaatttgtgttttttaaagaaagaagtttatcaaaaataaaact
ttcctGTCTAATTTTTCTTGTCCAAGGCTTGATCACGCGTAATAATTAGA
GTGAAattaattatgcagaattttggctACGCGTTAATGATTAGAGTAAG
ATTAATTACGATTTTTCGGCAAAAACAGGGTACGCGTTAAATTAGACTAt
gcgttaaattagaaaaaccacggTACATGGTATTTGGCCATTCCTATTCC
CCTGTGCATTAATCCGATTAATACAGTGATTTGTTTGTGTGATTCTACCC
AAGCTCTGGTTGCCAAGAGGGTTAGAATTGCGGGAAAtttggccatcgaa
aaattggtCGTCAGAATAGTCATCCGGGCGTCGAAATACTTTATTGCatg
aaaatttcgcggtttcACGGTCGAGTTCTGAAAACTGCGAAATTAAAATG
CCGCGAAACACGACTATTTTCAggattttaaaaaatcacccgaaaattag
tatttttagggcaaaataggccatatAATGAACAGAAAATtctctcaacc
gcgaaattaaattcccgcgaaacttcagaattttgagctgtgaaccgcga
aattaaattccgcaaaaatttcttcccgcaaaaatttcttcccttaaagt
acactacgatattatcgtgagatacactctggtacacagAGTAGCGATCA
TACATACAGAAAATTAGCACAATCGATCGCAATCGATAACAATCAAATTC
AATTGATGGctaatcgataataatcgaattTAATCGATGAAAAAATCAAT
ACCAAtcgataataaaattttacgttCCTATCAATTGGCCatcgattagt
tatcgatcGATCATCGATTACGAACGACTTTTATCGATTGACATCGATTA
AATCGACAATCGATGTTATCGATTGGGTACGCCTGGAAAAGAGAGTGACC
AATCCATAGCCAATAGGNTTGACATTGATTAAATCAACAATCGATGTTAT
CGATTGGATACGCCTGGAAAAGAGAGTGGCCGATCCCTAGCCAATAGAGA
AAGAGGTGagacagtctaaacttaaactcctatatcaggattagaaacta
ggctggTCTTGCCTcctttatcttttcctttacaacaattacaatgctga
caagttgacacaacacaacACATGCGTACATGTTATGTACCatttgacaa
gtaatccctgagagaagtttttatagaaatctgcaacaaaaacaaaagtg
gtctcttctgctgattgcttcccagcgctccttcgcagctgcttatcaaa
tttccaccaatgaggttgctgcatatttcaaacggcccttctttttggca
ctcgtggcctttcagtgccttgcacgacgggcagctgtaaaatcccatcc
ttcatatatttgtttcaatccgtgatccgtggcttgagtttttttctcat
cttcaatttactgaagaaagcaggaatttgatgcaagagttagattgtca
acaaagtgccgtaaaaaatcattgaataaaagaagaacttaaaatcttaa
atattttcattttgaagaataggtgaaaaaagtgaaacatagaaaagttt
catttttcattacattaatcgaaatgggggatttggaaaattttctatgt
ttagttttttgcacaaacccctgtaactatgggcgagcaccccgttgcta
agatgttggcttgaaatcgaaaatgaaaccactcaaaatgaaagtaaaat
cggcctgtactcgaaatcccgtaatcttgatataccagtttaagtctata
ctgtgaGACTGGCAGTCTAGCAAAAAGTTAATTCTCCTTTCAGgaaaaag
actataatttgtttacctttattcttgcagcttcctaacatccaagctct
caaacatcacaagtcaaatgaaattactttcgatttcccgtagaaattat
gcaatgaaaaatccgggggtcaataaaTGGAGACTTTCTTTTTCGCACaa
gatttttttgcttataacgaattattacttttaataTATTtggtaaatat
attttttgattacaaaaatactttacattatttttaaagtttgaaaaagt
cgattctacttagttctttgttttcatgtctaacccccgtctcaaaagaa
gtcccagaatctCGAGATTTTTACAGTCGGGCGTTTaaaacaaaggcgtt
tttatttttctgcccacttacgaatttttcttgaaaataggcatttaaaa
tatcaaatttaaaaataatagtataaaactttattttctACCGTATAGTC
CTTCttttaaaacgaaaaaacaaaatacactagaaaaataaagaaattac
aagtgttatcaagccacccaaaataAACTTTCATTTGTTGCGCGTCATCA
AATTGTTGTATACCTCACGATCTtttgtcaaccattgtccaatcccgtaa
gcAATTGAAGTGCTGTCAGTAATCtgagaagagaacaataacattataac
atcacacaaataaattacgctgggaAAGTCCGCGAGGAAGTAGAGAGAAA
AGAAGTGTaaaaaagatttacaaaatagaaaagtttcgttttggggtaaa
gaatcagtattgtgaatttaagcgagtttctattttgcaatttttctaca
gagccaaataaagattttatctattgttcttgctcgattgcctctaagGA
TAAGTTCCGTAGGAATGAGGCTATCGAGACATaatgtgacgaatttgcgc
gaaaacaaaatttaacatttcTCTAGGCTGACTGGTAAAAGGCTGCTAAA
AAGCCGGTATTTTACTGCTTTTTGGCCAATCGGTCTGGACAGGTCTTTCC
AGGTACTTAAAATTGCTTGGGGAGGGGAGAAGACATAACTTGgaccccca
atatggaccccaatatggaccccattatggaccccattatggaccccaat
atggaccccccAAAATTTGCAAATTACATCACGACGCCACGCTGTCGAAT
TGTATCATGGTTACCACATGTTTAATTTCATAGACCGGctatttatttgt
atttcttgaaataaaatcatttcattatcaaaaataactttgaaattatg
ttttAGAACATAAGGTCACACGTGTCTTAGACACAGGGCAcagcaacctc
gtccccgtgtatcccaggctttatttacgttactgattgacgccagagaa
taccctggtgttggctgatgcaatttccccctctcagagggggaacttct
caaaacaatacgtcataaaaaattctGACGTTACAAAGCTACACTGCAAT
GCAACCACTCGTTTTTTCTGCCAACAGTGGAATGAGCACAGAAACTAAGC
GATTTTACGCCCGTTTGAGCGAGCTTCtatatgagaaaaataaatcttca
ttttcggaaacatatttttatgtaaaaagaaaaatttcttttagtcTGAT
TCGGTCAGCTGTGGTGTGTTTGAGAGGCTCGAGGTCCTGGAGGCACCGGA
GACACTCGCCTTTCGTTAACACCACTGCTGACGCAGTTACAAATTTCATT
TGTAATATTTAATTAAAGTTTTCAATAAGTTATAAGTTTTGNATCACTGC
TGACGCAGAAGTCACAAATTTCATTTGTAATATTTAACTAAAgttttcaa
taagttttcagttttgttgttttttttattactatATTTTATTAGACACG
TATTTTTCAATACgtatttttggacattttttgagtttttcacacTGGTC
TTTGCAGGGTTCCAGTTTCATGTTTGccttttctttttcctcttgGTCAT
TGCTCactgtttttcagatttttcatcttaaaatatatttgatttctatt
atatgcagggttcgaattataaattttaggagCTTCGCTATTTTTTGGAG
CAAAGCGAGGTAAAAAAGCAGTGCCGCaggcaaattttttttactgtttg
cgaagcattttcattattttgcaaTGTTGTTTAGAAGAAAATGCGGATCT
TCAATGCATTTCTCGAGAAAAGCAAAGTAAGACTTGAAGTAAGAAATTAT
AGACAAAGCAAAGAATAGTGAAGTTTTAAAGTGGCGAGTAAAGCAATAGA
AACACGAGTGAGTAAAGTTGctagtttataaagcaataaataagcgaatg
aataaagtagcgaagtggcgagtagataaagcaatagataaacgaatgaa
taaaatagcaaagtggcgagtagataaagcaatagataaacgagtgaata
aagttgcgaggtagcaagttgataaagcaatagataaacgagtaaATAAA
GTAGCAAGGAatgagttgataaagcaatagataaacgattGAATAAAGTT
GCGATGTAGCAAGTTgacaaagcaatagataaacgattGAATAAAGTTGC
aaagtagcgagttgataaagcaatagataaacgaatgaataaagttgcaa
agtagcgagttgataaagcaatagataaacgagtaaATAAAGTAGCAAGG
AatgagttgataaagcaatagataaatgattgaataaagtagcgaaatGG
CAAGTTCACAAagcaataaaatataaataaatgaaagaagtagcaaaata
ggtgttttcttataatttttaacttcgcatttttgagttacaaaatcttt
ttgggtcgctaaatctaaaattcacttcgcattttgcgaagtgcgaagct
ataattcgaaccctgataTGTATatccaaatgaaaaaaaaaatgcaatag
TTTCAAACCCAGGAACAAATGACATCTGACGTTTTggttttgaattacgt
aatcttacgcgttcgaaaactagccaatgccagggtattatctagcgcta
tcagtaagtaTCAAAgagctgataatgcgcagggaacaAGGTTGTGGGCA
CAgatcatacaaattacagaccagaaaaattGTAACGCGCTCGTATCATA
TAATTTATATAtaacatgaaaataataaatGCAATGGAAATGATGTATAT
GCTATTTAGAAGATTTCAATGACAAATCGTCAATCCCAAATATTGANAAT
AATATATGCAATGGAAATGATGTATATGCTATTTAGAAGATTTCAATGAC
AAATCGTCaatcccaaatattgacaaaaatgacaCTTAAGTTATGTAAAT
aagaacattatcaaaaaaaatgaggtatgtatacaccaatttacaacaag
tgttttttcatgctcaataggatgctggcggtgcaaatggatatagattg
cgattcaatgaaaacattaatgctccaagagagctgtttaagagatatga
aaatagtacttttattattatttttgttttcgtaTGAACAGAGCATTACA
TAACTGCAAGTTTTGAAAGGACGTGTTTCTTCCACGAGAAAGACGTTACC
TGTCATTTTCCTGACAAAATGACACTTTTCgacaaaaaatattgacaggg
cactTAATTGGGATACCTGCAAGCTTTATTTacatcaaatattttaattg
taccgaatgagatgcctttgatataaatagataaatattNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAG
GCAAACACTGGGAAGcgcagttttagagatacaattctcatcaattattc
tattgtccttatgttgacaaaatgacttatttttacaaaataatgatctg
atggtcaaatataaagcttctttaatcaaccaaaatgctttcccgccatt
tttgagggggtccataatgtggtccatattggggtccataatggggtcca
tattggggtccatatagGGGGGTCCAAGTTATGTCTTCTCCCCTTGGGGA
GTCTTATTTCTTGGTTTACTAGGAGTAAAATCCCTCCtcagatttctttt
gattcctTGAGACTCCCCAGGCAGCACCCCTTATCGCACCAACAcattct
tttttcttatcaCAACAGATCACAATCACAAAAAGTGGATCATCACTCAA
AAGTAGCAAAATGTAGCCATGCTAAAGCATGAAATGCATCACACCATAGT
CTTGATCAAATCATCAAATCACAGCAAAGAAAATTTGGAATCATAATCCT
GTAAAAAAGAAACCCTAATATCACGGCTGCTCAGCTGTTCATTCataatt
gtatattttttcttttgataatgaATTTGTTATTTTAGGATTTAAGATAA
TAAGGATAGTAATTGATTAAATACTGAAGCCTTTTGAAATGATAGCAGTC
CAGAGCCAAAGGACTTTCATACTTGCCACAGCAGTTGGAGCCACTCTAGG
ATTGGGATTATACTATCTTCGATCTCGAAAAGAAAGAaatgctaaaattc
aaaaacgaGTAGATAAAATTGTAAGTAAGCTTAAGCTTAACAGATATATT
TGAAATTGTGTTTACATTCAGTCAGATTTGAAAAGCTAATTCACTTAGCA
ATTGAATGTGTCTTTATGTTGTGTTCAAGTGTATTGTGCCTCTGTGTTTT
AGCTCTTCTTGGGATATGAGCCATACATAAATGAAGCAACCAAGGATCAT
ATGTTCTTTATCCATTATTTTTTAATCCTTCATCTGTATGTTTCACTTTT
GTTCAcagcttgaaattttgaatcaaGACTTCTGTCATTTCAAAGATCCA
GTAGCCATTAAGGAAAAAATACGAGCTTTTGTGACAGCTGGTGCACAAGG
TGTCCAGGTTAGTTTATTGATTTAACTATTTTAATTCATAAATTAGCTAC
TTGATAGAAGACACAAGAAAAATTAGGTAATatctttacatttttcaaat
tcttctgGATCAAGATTTTGAAGTTCTTTAAAATTGTCTCTTTAGATTGT
CGCAGATTTTGATCGTACCCTGACAAAGGCTTTTGTTGATGGCCAGCCTG
CTCATGCTAGCTATGGTTTGGATTTTATATTCAACAAAACTTCTCACATG
TATAATATCTATAACTGTTTCACAGGGAGGTGCTAGTTTTGACCCTCTTA
GTTTGTTTAGGCAAACTACATACCATATTTATTCTGTCCAGAAAAAAGGT
TCTAATGTTGAAGTCTGCAACAAAAGCACTGCACTAACCTTCTAAACCAT
GCCCTGTCGAATTCAAAGATTTCATTGTTTCATTTAACTTTCAGGTGTCA
TTGACGATTCATCATATATCCCTGAAACTGCCGTCCAGGAGGTAAGATTT
AATTAAAGTTCAAgtattgattgaaaaattaccCATTCGTTTTTGAAGGT
AGAATATTCATTTAGAGTAGTTGAGGAAGGATCAATACATAACCAGAAAA
TTCACCCTTGCTCAACAATGCATTTTTTAGACAGTACATTTGATTGATAA
CTGTAAAATGTAAACTGTATATAAAATATCCATGAACAGAGTTGTCGCAC
AACTGGGTTAGATTGTTTCAACAACCCTGTTGTTTAAAAATTATGGTAGT
CAGTATTTACAATCCGTTTAGTTGCCTTACTGATTTTCAGAAATTCTGTT
TTTAATCCATTATCCgatcttttcattttaaagtagTAAAACATAAGTGT
CAATAGAAGAAAAACTTGAGTGAAGGATAAGAAAGAGAATAGGGCTATCA
TTAAGTAATTGCCAAACAACTGGTTGTCAAACAACTGGAACTGGGCTGTC
AAACAACTTGGATTTTCACTTGTTTGACAGTTCAGTTGCTTGACAGTTTC
ATTCAAATGACAAATAATTGGGctgttgaaaaaatgcactgtcaAGCAAG
TGACATAGGACCCATATAATCTCTTATTTAATTCATTGAATGAGCTTTTT
Gggcctacctggaggtcctataaattaccctgtgtttgtttgtttgtctg
tcCATTGGTTTGTTAACAGTTTTTCTTGGGATTAGCTTGAAGAATCTTTT
AGACTTTTGGCTCAAATATGtaaaatgataatacctaaaatttgacaaag
accaattttggaagaaaaaaaattcttttttgtttttgtgaccAGATGTG
GTTTCTTTGATATCTCTCAAgtttttctcattagttttttctaatttttt
tgattttttcaatttaatttatttttcaatttaatgtTTTCTGTTAGGTA
GGTcaataaaagtatcacttgtttttgttttaaatatttttcttttcagc
tAAATGCATTAAAAGCAAAATACTTTCCAATCGAAATGTCAACGTAAGAT
ATATAATTATTCTTAAACAGACCAAACTTAGGAAAGGTGTTCTTGAGAGC
ACAAGAATAAGAACCTTTTCATTGAGAATATTAAAGTCACTTGTGTACAG
GTTTTTTTAATCGATCATGAATAAGAGTTTAAGAATTTTTACAAAACATA
AGTTATACCAAGTAGGCATCACCTCCAGCTTTAATTCTCCATAGTGCAAC
TATTACTGCAAAGATTTGCCGTGGTAAAACTTCAATTGTAAATAGAAAGA
ATTACTGTCCAATAGACACTGACATTTTGATATATATCATCATCATACCA
GATCATACCAACATGTATATGGAGAACTAATATTCCTACCTGTAGATTTT
GCTAATTGTAGTGAGATGTAATTTTAATtcgaactttttatttttatgta
attACAGGGCATTAACTGAGGCTGAAAAACTACCACACATGATTCAATGG
TAggtaaaaaaagataaaacaaatTGGGGACAATGCCAAAACATTAAATG
TACTACTCCTCTTATTTTGAAGCACACAAGTTTTTATTGGAGTTGTGCTA
TTTTCTCCCcttgatttttttggtcctACCTCAGAGGTCCtttaaattta
attgaaattgtTGGTTCGTAtgttatcagctttttttttggatcggccaa
ttagttttttctgattttttgcatagtgatgcAAAATAACAATACCCATA
GAAAATTTTCGTTTGCCTTGAAATacagattttcgttttttggggatATA
TTCCCATTTATGATAGGGAAATCacgctaaaatatttatttaaccATGCT
TCCGATAAGATATTATGAAATTAGACAGTCCaacaaacttgaaattttga
ccagtaaTTTTTATCGTTTTGATCAAGTCCACGTTTTGATCAAGtccacg
tttttttttttaagaaacacacttttaagaaacatgaggctcagaatgcc
taaaaactaagaaacatgctgaggctgagaataggaaaataacatttttc
aattcggttttttttaagaaccttccaatcaaaacaatttattttttctt
tgcatgaaaaataggctgattatgtcaaaaaaaaattagaaacatgtaag
aaacatttaaggctcaaaagatCGATtccttaagaaacattgaggctgct
tagtaaaactagtttcttaaaaaaaacgtgtaacctgTTTAACCTTTTGT
ATGTATTATAGGGTCAATAAATCAACATATTTAATGATATCTCATGATTT
GAAAGTGCTATGaagttgaaattttgaccagtaaTAGACCATGATAATGC
AAATGAAAACTTTATTGTTATGATCCAGCCACCACTTTACTGGTATTTTA
CAGTCCAGTATCATAAGTTTCGTTATGTGTTATACTATTTTGTTATGCTT
AATAACAAAATCAAGCTACTTTTGATAATATCATGATTCAGAAGTGCTAT
GAACTTGTTTTACTGTTTTACTGTTTTACTTGTTTTTAAGTCTCATTTCT
TACTGATGTTGgcattttttcctattttctttttacatcaatcttcagga
cCTCCATTCAGCATATAGCTTGTTAGTTTGACATTCTGATTATTTCTTTA
AGGTACAACTCTTCTTTTCAAGTAGCAATCAAAGCTGGAATCAAAAGGCA
CATGCTCCCTGCTATGGTTAGAGAAAGTAGTGTTCAACTTAGGTAACAAA
ACTTAAAGATTGATGCTTGCAATGAATATCTTTTGGAAGTCATTTTGTGC
CttatatgtgactccccaagcgatttaaagtacctgaaaatgggACCGGT
CTTTAGACGGTCTTTTAAGGGCCGGTAAATGACCggtaaaaatttaccaa
aaggcCGCTAAGAGTTTAGGGGACCGGCCCCGATCGCTCGGTTGACATCC
TTTTACAACAATTTCTTGATGTAATTGTTACTAAAAATCACTAACTAGCG
GCCTAGACAGGTCTAACGAACGGCCCAGACCGGTCCAACGAGCGGTCAGG
ACCGGTCTAGTGAGCGGCCACGACCGTTAGAGATCACATTTCTAGAAGGT
CTGGAGGCcgatctaaaacaaaaatttgaccgcTACTAGACCGCTCGTAA
TACCGGACTAAGACCGGtctgattttcaggtactttaaattgCTTGGGAT
GTCACATATATTTAgtcattgtttttctttaaagattttttggaaCTTTT
AATTTTGATGTTATGGGTCAAATCTACATAATTTAGTCCTGTTTTTACCA
CAGTCTTATATTTGTGTTTTAATATGTTAAAATCTCATATTCCACTTTTT
TTATTACAGGGATGGATCTGACCAGTTTTTCCACTTGGTCACTGAAAATA
AGACTCCAATATTTATTCTATCAGCTGGTGTAGGAGGTATATCTTTctga
aattttatatataagtCAGTATATATAGTATGCCAGTCAGTATGCAGTGC
TGCTGAGTCCTAATAAGAACGAAATGCAAATGCTGCTCTGCCTAAAAGAA
GATGGTTGGACAGAAATTCACATATGTTTTTCACCGGGTGTGACTTGTAA
TAaggaatgggcttttttggtgaCTAACAGTTGTAAAAATTGACTCTTTC
TCTAGCCTTTCTCCTGATGCTTTCGAGTTGTGATAATttacatttttagt
tttcttaTCTTTTCAGATGTGATTGAAGAAATTATGAAACAGCAAGCAGA
AATACCTCCACAATTGAAACTTGTGGCTAACTATTACTCCTATGACAGCA
ATGtatgttttttggacctaccttaaggtagtcctttaaattaacccttg
tccgttcgttcgttcgtctgttgccagcttttctcaggatcggctcatta
gttttttctatttttttgcacaacgatgcaaaatggtaatgcccaaaatg
tgacggagcccgattttcgagaaaaaaaaaattaatttccggccgaaaat
tccggaaatatgtttttttggcattttctcaagattttatcattcgtttt
ttctgattttttgctcaaagatgctaattaacaatgcccaaaatatggcc
gagtccgattttaaagaaaaaaaattttccggcagaaaatgccggaaatc
gccgtttttctggattttcattggactttttccttataattggttgtttt
ttcattcaaaaacattattaatagtaatgcccaccatcaagcatgttcaa
atttacattaaaatagatttttgaagccggaactatttaaaaatcgccgg
aacaacctattttcgccggaaagacagtatttcttgaatttctcaaggtg
tactttatatttttttatgaaattttgcacactgatgtaaaatgacaatt
cctaaaaagtgacggagctcgattttcgaaaaacatttttttccggccga
aaatggcggaaatatgccggaaaaactgtttttttggcattttctcgaga
ttttatcattggttttttctgatttttttgcttaaagatgcgtattaaca
atgcccaaaacatggctgagtcctatttttgagaaaaattttttccggcc
gaaaatgctggaaatatgccggaaatcgccgttttctggattttcattgg
acttttttcttataattggttgttttttaattcaaaaacattattaatac
caatgcccaccatcaagcatgttttaattttcaataaaattgatttttga
aaccGCAACTATTGACTGACTGATAGCTGGATATTACATTATACAATAAA
CTACCCATAACCTAAACTTCAACAATAATAGAAATAAGTAATTGTTAAGT
TACAGAGATTCAGAGAGCCAGTCGCCAAAATAGCTTTCATCAGACTAAAA
TAAAACTCGAAGAGCTCGATTCGAGCTTTGTACAACTACTGTATTTATCT
TGATTTTCATAATGAAATGCGTAAGCTCGATTAATGGAAGGTTTATCATC
TGATAGTAATCTGGCTACTTGGAGTTTGAGCCAcattttcagaaaaacca
aactCTTCATTCCAGGGGACAATGAACGGTAGGGATGGTGAACTAATTCA
CACTTTCAACAAACATGAAACCTCTCATAAAAGCAAAGATTATTTCCACT
CTATCAAGGTATGTTCTCTcatatttatttaccatttctTGTTCATTTGT
TAGCTACAATAACATTCAGCCTCGGTGTACAAGTGCAATTTACAGGTATA
TAAAAGACTTAATACCAGTCCGGGTAGGAAAGCCAATATTATAAATTGTA
AGGTCTTTCTTCAAAGGTTTTGTCTTTAAATAAGAgagatatcgtttgct
tactcgtcaattttaacttacaagctttttcaaagaaaaacattttttct
ttatatcagcataatataacaaaagggATACAACGTCCTGATTTGAACAT
gtttctgatatgaaacgggaaaacTACAGTTTTTACAGTCCCAAAAGTTT
TTTGGTAAGTGTCGTGTTGGTAAGTgctttttattttctcattatagCAA
TGTAAGAATGTTTTGGTGATGGGAGATACTTTAGGTGATCCAGTGATGGC
CGATGGCATTGATCACATGACAGCTTGCATCAAAATCGGCTTCCTAAACA
AGGACGTAAGTGCTTGTCTTCGAATTTGAAACTTTTCTGTTCCTGAAGGA
TAACCGCCTGGTCTCTCAGGGCGAAAAGAAAAAGCTATGTGACctcctac
cattaattttttaatcttgatttaaaggttttcttaATATCGCTCGAAAA
AGgactaaaatttgggatattttggCCCAATGGCAAAATTTAAAGGGATC
TAACTCACTTTCGAATTTAAGAATTGCCAAtatctaatttttttcaagta
cATGGGAACATGTAGAGTTATGAAACGTACAAAAGTCTTGTGAGTTTCGT
GACATGGTCATAAGTaaggcaaaaacaaaaaagcttatTAATAAGAAAGT
TGTGTAAGAATATTCGATTAAGCCTTCTTCGATAAATCAACCGAGAATAT
ATTATCGATTCCGGTCGGAAATAACCATTTAAGTATAAAagattttcatg
ttttgttaaattACGTAATTTCTGCATTTATGAAAGtgaacgttcgattt
gcgtaaagGCGTGTTTCTATCGATCACACTAGgtcaaaatttcctaaaat
aggagagtttctaaacatcgaccagaaatggtgACCACCATCGGCAACCA
CCATCGGCCACTGCGACTTTTAGTATTCCGAGGACTTGATTTGGACATTC
TCTACGGtcgagagagcagataaactcgataacccaaatttatctggtcg
ccggtcgtgatcgccatttttggtcaacgtttagaaactcccctaAAATA
GCATATAGCCATCAcgaattaaattttcttgtaCACAAAATGCGAGCTTT
CGTGCTCTTTTCTCTGCTGAAAACTTACAACCCTTTTAAGTGGACAGGAG
CGCACACGTACACACGTCCATATGCGAccgatggaaacaggccttaaGAG
ATCGCCTCTACacattcgaacgtttgcttccataatggcggaaattatgT
CACTTAAACAAAACATGAGAAACCCATTTTATAACACCATACGACTCACA
AcatttatttgcttttttttcgatttcaggTTGAGGAGTCATTGAGCGCT
TATTTATCAGTCTACGATATTGTTCTTGCACATGATGCAGACATGGACCT
TATAAATCTGATGTTACGTGAAATAGTCAAAGATTAAGAATAAGTTTTCC
AAATTCCAAGTTCCAATATTGTAGTTAGCACGAGAAGAaggttttttcca
attttagcattttccaatttttaagaGAATTTTGTCAATTATTTTGTACA
GCCTCTAATTATTGGCTTAATTACACCAAGCTGGTATGTAGTAAACAACA
GTtactttaaaattatttttacacaCAAGCCACTTTGTTTCAAGGCTTCA
TAGCATCGCATAAAAACTAATGGGAAATTCAACTATTTTAAAAAAGGGTG
TCTTTTAACTGAAATAAAGTCATGTCGTTGAaaggttttgtttaaaaagt
tgTCTCTCCTTAACCTTTGCTGGTTATATTAAGTTGCATATATATTATAC
CATTATTTAATGAACATATAGTTACTTTATTTGGTATGTTATTTTTTACA
ATTTGCAGTTTTATATTTCTACGAAACTGTTCAATTGATTTTTCGCAAAC
TTTTAAATGACTCGCTGTAGACTATTATATGCCAATTTTCCAAAAGATTC
GCCTATAGTAATATAGTCAAATCTTTcttattcgaacctctataactctc
tattatttttgtaattcaaaCTTACCCCCAAGTGAAAGGTAGTGTAAAAT
GCCCTCTACGATTCGAATAATAGGGCCTaataaagatcgaattagagaga
gatgGCAACCGTAGTCAAAAAGACAAAACTCTTCAGAAATGGTTAGAATT
TGAGTATTATcacattgaaaaatatatatcttatcggaattttcgatttt
tctaaaacagcgatgcattgtgggattgtttcgggggtattacaatagaa
tttccttgaggaattcctaagagatttcgaTTGTAATGCCCCCGAAACAa
ttccacaatgcatcgcttttttagaaaNCGGAGAAAAGGTAGAGAAAAAC
ACTGAATCAAGATGGCGACCAAGAAATGGGTTTTTCCAACTTACTGCTAA
AGTTCTTGgattttttgactggtttaggccatttttcttcatggaaacat
tgtttttataatggcaaaacatccagtaagtatatcttatattttgagtt
ctgtttttagcataaaaaatccatttatttgtcattttgaccacttttct
cGACAAACCATCGGAGTCGACCCAAACTTAcagtactttttactttttat
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_011127XLOC_011127Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00019789-exon-sc0000336-1491911889:291493..291525TCONS_00019789-exon-sc0000336-1491911889:291493..291525Clytia hemisphaericaexon
TCONS_00019789-exon-sc0000336-1510915933:291493..291525TCONS_00019789-exon-sc0000336-1510915933:291493..291525Clytia hemisphaericaexon
TCONS_00019789-exon-sc0000336-1575043694:291493..291525TCONS_00019789-exon-sc0000336-1575043694:291493..291525Clytia hemisphaericaexon
TCONS_00019789-exon-sc0000336-1491911889:298531..298712TCONS_00019789-exon-sc0000336-1491911889:298531..298712Clytia hemisphaericaexon
TCONS_00019789-exon-sc0000336-1510915933:298531..298712TCONS_00019789-exon-sc0000336-1510915933:298531..298712Clytia hemisphaericaexon
TCONS_00019789-exon-sc0000336-1575043694:298531..298712TCONS_00019789-exon-sc0000336-1575043694:298531..298712Clytia hemisphaericaexon
TCONS_00019789-exon-sc0000336-1491911889:298951..299049TCONS_00019789-exon-sc0000336-1491911889:298951..299049Clytia hemisphaericaexon
TCONS_00019789-exon-sc0000336-1510915933:298951..299049TCONS_00019789-exon-sc0000336-1510915933:298951..299049Clytia hemisphaericaexon
TCONS_00019789-exon-sc0000336-1575043694:298951..299049TCONS_00019789-exon-sc0000336-1575043694:298951..299049Clytia hemisphaericaexon
TCONS_00019789-exon-sc0000336-1491911889:299188..299257TCONS_00019789-exon-sc0000336-1491911889:299188..299257Clytia hemisphaericaexon
TCONS_00019789-exon-sc0000336-1510915933:299188..299257TCONS_00019789-exon-sc0000336-1510915933:299188..299257Clytia hemisphaericaexon
TCONS_00019789-exon-sc0000336-1575043694:299188..299257TCONS_00019789-exon-sc0000336-1575043694:299188..299257Clytia hemisphaericaexon
TCONS_00019789-exon-sc0000336-1491911889:299487..299533TCONS_00019789-exon-sc0000336-1491911889:299487..299533Clytia hemisphaericaexon
TCONS_00019789-exon-sc0000336-1510915933:299487..299533TCONS_00019789-exon-sc0000336-1510915933:299487..299533Clytia hemisphaericaexon
TCONS_00019789-exon-sc0000336-1575043694:299487..299533TCONS_00019789-exon-sc0000336-1575043694:299487..299533Clytia hemisphaericaexon
TCONS_00019789-exon-sc0000336-1491911889:300492..300535TCONS_00019789-exon-sc0000336-1491911889:300492..300535Clytia hemisphaericaexon
TCONS_00019789-exon-sc0000336-1510915933:300492..300535TCONS_00019789-exon-sc0000336-1510915933:300492..300535Clytia hemisphaericaexon
TCONS_00019789-exon-sc0000336-1575043694:300492..300535TCONS_00019789-exon-sc0000336-1575043694:300492..300535Clytia hemisphaericaexon
TCONS_00019789-exon-sc0000336-1491911889:300950..300991TCONS_00019789-exon-sc0000336-1491911889:300950..300991Clytia hemisphaericaexon
TCONS_00019789-exon-sc0000336-1510915933:300950..300991TCONS_00019789-exon-sc0000336-1510915933:300950..300991Clytia hemisphaericaexon
TCONS_00019789-exon-sc0000336-1575043694:300950..300991TCONS_00019789-exon-sc0000336-1575043694:300950..300991Clytia hemisphaericaexon
TCONS_00019789-exon-sc0000336-1491911889:302145..302234TCONS_00019789-exon-sc0000336-1491911889:302145..302234Clytia hemisphaericaexon
TCONS_00019789-exon-sc0000336-1510915933:302145..302234TCONS_00019789-exon-sc0000336-1510915933:302145..302234Clytia hemisphaericaexon
TCONS_00019789-exon-sc0000336-1575043694:302145..302234TCONS_00019789-exon-sc0000336-1575043694:302145..302234Clytia hemisphaericaexon
TCONS_00019789-exon-sc0000336-1491911889:302852..302928TCONS_00019789-exon-sc0000336-1491911889:302852..302928Clytia hemisphaericaexon
TCONS_00019789-exon-sc0000336-1510915933:302852..302928TCONS_00019789-exon-sc0000336-1510915933:302852..302928Clytia hemisphaericaexon
TCONS_00019789-exon-sc0000336-1575043694:302852..302928TCONS_00019789-exon-sc0000336-1575043694:302852..302928Clytia hemisphaericaexon
TCONS_00019789-exon-sc0000336-1491911889:303209..303294TCONS_00019789-exon-sc0000336-1491911889:303209..303294Clytia hemisphaericaexon
TCONS_00019789-exon-sc0000336-1510915933:303209..303294TCONS_00019789-exon-sc0000336-1510915933:303209..303294Clytia hemisphaericaexon
TCONS_00019789-exon-sc0000336-1575043694:303209..303294TCONS_00019789-exon-sc0000336-1575043694:303209..303294Clytia hemisphaericaexon
TCONS_00019789-exon-sc0000336-1491911889:304558..304650TCONS_00019789-exon-sc0000336-1491911889:304558..304650Clytia hemisphaericaexon
TCONS_00019789-exon-sc0000336-1510915933:304558..304650TCONS_00019789-exon-sc0000336-1510915933:304558..304650Clytia hemisphaericaexon
TCONS_00019789-exon-sc0000336-1575043694:304558..304650TCONS_00019789-exon-sc0000336-1575043694:304558..304650Clytia hemisphaericaexon
TCONS_00019789-exon-sc0000336-1491911889:305040..305147TCONS_00019789-exon-sc0000336-1491911889:305040..305147Clytia hemisphaericaexon
TCONS_00019789-exon-sc0000336-1510915933:305040..305147TCONS_00019789-exon-sc0000336-1510915933:305040..305147Clytia hemisphaericaexon
TCONS_00019789-exon-sc0000336-1575043694:305040..305147TCONS_00019789-exon-sc0000336-1575043694:305040..305147Clytia hemisphaericaexon
TCONS_00019789-exon-sc0000336-1491911889:306172..307442TCONS_00019789-exon-sc0000336-1491911889:306172..307442Clytia hemisphaericaexon
TCONS_00019789-exon-sc0000336-1510915933:306172..307442TCONS_00019789-exon-sc0000336-1510915933:306172..307442Clytia hemisphaericaexon
TCONS_00019789-exon-sc0000336-1575043694:306172..307442TCONS_00019789-exon-sc0000336-1575043694:306172..307442Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000336supercontigsc0000336:291493..307442 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	8.18046	6.05082	13.5248	13.5663	13.0755	14.2278	10.4441	7.07159	5.68223	5.36389	5.03806	6.64856	23.9535	30.1462	2.28775	3.5041	14.6936	15.1559	4.93384	7.6099	15.0663	16.1206	8.53608	4.55685	5.32116	2.73975
Blast
[Close]
BLAST of TCONS_00019789 vs. Swiss-Prot (Human)
Match: 5NT3B (7-methylguanosine phosphate-specific 5'-nucleotidase OS=Homo sapiens GN=NT5C3B PE=1 SV=4)

HSP 1 Score: 223.402 bits (568), Expect = 4.995e-66
Identity = 101/274 (36.86%), Postives = 171/274 (62.41%), Query Frame = 3 
Query:  249 KDPVAIKEKIRAFVTAGAQGVQIVADFDRTLTKAFVDGQPAHASYGVIDDSSYIPETAVQELNALKAKYFPIEMSTALTEAEKLPHMIQWYNSSFQVAIKAGIKRHMLPAMVRESSVQLRDGSDQFFHLVTENKTPIFILSAGVGDVIEEIMKQQAEIPPQLKLVANYYSYDSNGTMNGRDGELIHTFNKHETSHKSKDYFHSIKQCKNVLVMGDTLGDPVMADGIDHMTACIKIGFLNKDVEESLSAYLSVYDIVLAHDADMDLINLMLREIV 1070
            + P  ++E + A    G   +Q+++DFD TL++   +G+   +SY ++D+S  I E   +EL AL   Y+PIE+    T  EKLPHM++W+  +  +  +  I++  +  +VRES+  LR+G   FF+ +  N  P+FI SAG+GD++EEI++Q     P + +V+NY  ++ +G + G  G+LIHT+NK+ ++ ++  YF  ++   NV+++GD++GD  MADG+  +   +KIGFLN  VEE    Y+  YDIVL  D  +D++N +L+ I+
Sbjct:   16 RQPGRVQEIVGALRKGGGDRLQVISDFDMTLSRFAYNGKRCPSSYNILDNSKIISEECRKELTALLHHYYPIEIDPHRTVKEKLPHMVEWWTKAHNLLCQQKIQKFQIAQVVRESNAMLREGYKTFFNTLYHNNIPLFIFSAGIGDILEEIIRQMKVFHPNIHIVSNYMDFNEDGFLQGFKGQLIHTYNKNSSACENSGYFQQLEGKTNVILLGDSIGDLTMADGVPGVQNILKIGFLNDKVEERRERYMDSYDIVLEKDETLDVVNGLLQHIL 289
The following BLAST results are available for this feature:
BLAST of TCONS_00019789 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
5NT3B4.995e-6636.867-methylguanosine phosphate-specific 5'-nucleotida... [more]
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