TCONS_00019764 (transcript) - C. hemisphaerica

Overview
NameTCONS_00019764
Unique NameTCONS_00019764
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length285

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00019764 ID=TCONS_00019764|Name=TCONS_00019764|organism=Clytia hemisphaerica|type=transcript|length=285bp
TCACGGCATCTATAGTTTTAAATCCAATCCGTCAAACGATGATTTGACAG
GGAAGAACGTTTCAATATGTAACGCGTTTACAGGTCACCCACTTAATGAG
AATGAAGGACAGTATAAGATTTCGGCTGTAATTAACATGATTTGCATGGT
GCTATCGTTCGTGCTCATTTTATATGTTGCTGTATATGTATGGAGAGGGC
AAATGAAATGCTCCGTCAAACGAAAGAAGTTCTTACGCCAAGAAATGAAA
GTCACCTTCCTCGTTTCTCTCTTTACCACTGTTTT
Run BLAST on NCBI

transcript from alignment at sc0000335:44719..45003

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00019764 ID=TCONS_00019764|Name=TCONS_00019764|organism=Clytia hemisphaerica|type=transcript|length=285bp|location=Sequence derived from alignment at sc0000335:44719..45003 (Clytia hemisphaerica)
AAAACAGTGGTAAAGAGAGAAACGAGGAAGGTGACTTTCATTTCTTGGCG
TAAGAACTTCTTTCGTTTGACGGAGCATTTCATTTGCCCTCTCCATACAT
ATACAGCAACATATAAAATGAGCACGAACGATAGCACCATGCAAATCATG
TTAATTACAGCCGAAATCTTATACTGTCCTTCATTCTCATTAAGTGGGTG
ACCTGTAAACGCGTTACATATTGAAACGTTCTTCCCTGTCAAATCATCGT
TTGACGGATTGGATTTAAAACTATAGATGCCGTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_011111XLOC_011111Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00019764-exon-sc0000335-1491911889:44719..45003TCONS_00019764-exon-sc0000335-1491911889:44719..45003Clytia hemisphaericaexon
TCONS_00019764-exon-sc0000335-1510915933:44719..45003TCONS_00019764-exon-sc0000335-1510915933:44719..45003Clytia hemisphaericaexon
TCONS_00019764-exon-sc0000335-1575043694:44719..45003TCONS_00019764-exon-sc0000335-1575043694:44719..45003Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000335supercontigsc0000335:44719..45003 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	1.35659	1.57513	1.02735	23.1379	27.1788	90.6197	100.465	56.6611	53.727	31.4771	25.942	5.85968	3.52309	2.36983	1.13031	2.08867	4.28163	12.8165	12.8957	8.96697	9.18493	4.25352	7.73413	10.9532	12.8859	0	0	0.51469	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00019764 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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