TCONS_00019685 (transcript) - C. hemisphaerica

Overview
NameTCONS_00019685
Unique NameTCONS_00019685
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length782

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00019685 ID=TCONS_00019685|Name=TCONS_00019685|organism=Clytia hemisphaerica|type=transcript|length=782bp
TCGTGAAATACGTCACAATACTGATGAAAATCTAAAAGAAAAGTATTAAG
AAAGAAAGAAGCAATGCTATGAGGACCAATCATGAAGATTCAAAGACTCA
AATACAGAAATGTTCAACAACGAGCAAACGGAATACGTGTCTAGATCGAT
GACGTCAACTTGAAGACCTTGAACAAAGCAACGAATCTTCTGGCCCTGTT
ATAAGCATGTACGAAATAATATTGGGTTGCAGTACAGTAAAAACCTACCA
CTTCAAACAGCTGTGATGTTGATGCCGATAAAAATAACAGTGAAACGATt
ggaaagaaaagataaatgGCGATCATTAGCCTGGATATCATATCAGTGTA
GGTGAATAACATTAGCCTGAGTTGCAAACAAGTCAACACAACATCAATGA
GaattattCCTGCGACACTATATGATTGCGGAAACGAAGTATTCACAGAG
CAACAGACTGGGCAGAGTTTTTGTAAAATGAAGACTCAATTCATCGTTTG
TGTTAGCTTTTGTCTGGTAATAAGTGtgACTGGCATTGCACTGAAGCGAC
AATGTATACCATGTTCTGACTATAATCAAAATCCTTATCCTCAACAGTGT
TATTCCTGTCCTCTGTGCTATGTCTGCACTCAACCAGATGGATCTAACGC
CCTCATCCCTACGCCTACACCACCTACAACACCGCCATCCCCACCACCTC
CATCTCCAACCGTATTATCTGGAGAAACAACACAAGCAAATCTAGCCTTT
ACAACAACCACTACTGCTTCCTCATCTTCCAC
Run BLAST on NCBI

protein sequence of TCONS_00019685-protein

>TCONS_00019685-protein ID=TCONS_00019685-protein|Name=TCONS_00019685-protein|organism=Clytia hemisphaerica|type=polypeptide|length=128bp
MRIIPATLYDCGNEVFTEQQTGQSFCKMKTQFIVCVSFCLVISVTGIALK
RQCIPCSDYNQNPYPQQCYSCPLCYVCTQPDGSNALIPTPTPPTTPPSPP
PPSPTVLSGETTQANLAFTTTTTASSSS
Run BLAST on NCBI

transcript from alignment at sc0000333:191298..203908-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00019685 ID=TCONS_00019685|Name=TCONS_00019685|organism=Clytia hemisphaerica|type=transcript|length=12611bp|location=Sequence derived from alignment at sc0000333:191298..203908- (Clytia hemisphaerica)
TCGTGAAATACGTCACAATACTGATGAAAATCTAAAAGAAAAGTAGTAAG
ATACTGTATACTAATAGCCAGGGGGTTGGAAAAAATCTTAAAAAGCGAGG
GGGTGGAATAAGAATGTCCTGGGTGGAAAATTTTCGAAAAATTAATCAGT
GGGGGGGCAGCTATTTTAATGAACTAAAAACTAAAATCCAGACAACTAAA
CTACTTTTTTGAATCCCAATATAAGGAACTTTATTGACCGTTTTTCCAAT
CTCGTCAATCCCGTCTCCAAGAGCTACGCTTGCTTTTACTGGTGCAAACA
TTTCGTGAAGGCTATCAGAATCATGAAAAAGGTGAATTTAAAGAGACTTG
GGTTCGAGTTTGTCGTTTTTAAACATTTTAAAATGGCAATTTGTATCATT
TAAGAGAGTCCCGTTTTTTCGGTTGCGAAAAAATAAAATTGAAATTCTAT
AAGCTAAAATTTAAAGCATCCTTTTATTTATAAATAATACAGCTTTACTT
TATATGCGTTTTTGTATTTTCAGTTAAGAAAGAAAGAAGCAATGCTATGA
GGACCAATCATGAAGATTCAAAGACTCAAATACAGAAATGTTCAACAACG
AGCAAACGGAATACGGTATTGAGTCTTTATAAATTTGTTTCTTATTGCAT
AGTCCGAATCGCAAACCTCTATTATAGGTATATTTCCTATAAGAAACTCT
TTTTGATAAAAGGTGAGTAGAGTAGCCTACTTAGTTTCTAACCGAAATTT
CACAAAAGCGCGAAGAAGAAAAATCACTTTCGATATTGAATTTGAAATTC
CATTTAGTAATTTTTTTTTGCAACATTTTTTTGTTTTATTTCTTCTTCCA
ATGATCTGTCTCTTATTATGGGACCTGGAACCGCCACCTTGGTCAAAAGG
CGACCCTAGAGGTGACCTCACTACATGGCCTATCCCCGGTCTATTTCGAA
CTCGCAGCCCTCCGAGTCGGACCTTTCCCTAAACCCCGCTAAATTGTGTT
TACAGAACTTACGGAAACGATAATAGATCGATTAAGTGGTATCATCTTCC
ATATTGTCATGACAACAGGGTCTGATCCAATGTGAAAGAGCAGTAAATCC
AACTGAAAAGCAACGAAAAACATATTAGTGGAAGTTTTTAGATCTTGAAC
AATTTTTTAACGGCCGTTGGAGTTCAAGGGATTCTCATAGTTGTTCTTCT
GGTTACTAAACTGGTTTCTTGCATGTAATTAAATCATTTGTTCCGCAAAA
GCAGGATATCTTTGACTACTACTCTATCCTTTAATGCCTTTTAAAGTTGA
AGAGCAACCGTCTTTATCGAATTTAAGGAATGTTTTCAATTTTAAGGCAA
TTTTCATTTGAAAAATTTCATTTTTATTCAAACGATTTATGCTCGGGAAA
AACATTTTTTCTTCAAATCCGCGAAAGTAAATATCGTAAATTTCGCGATT
TTTCGACCTCGCGAAACTTTCTGCTTGCGAAAGTTTGTGTGCCTAAAATA
CTTTACCTCCACTTTAGTGTCTAGATCGATGACGTCAACTTGAAGACCTT
GAACAAAGCAACGAATCTTCTGGCCCTGTTATAAGCGTGAGATATTCTAT
TAAATTCACTTTGAAAAATCATTATTTGGTATCGGATTGTTGAAATTTCA
ATCAAATCATAGTCCGTAAAAAAACTCTGGTCTGAAAGCTTTTTGATAGC
TTTTTCCTTTGTTAATATCAAAAGATGAAAATCGATTTGCTCAGTTTTTG
ATCACGATACCAAGTATTTATTCCTCTTGGAATTGGTTTAAGATTTAATC
ACATGATCAAAAAGCGAGCAAAACAAACTAATTTCTCAAACGCAAGTTCA
AGTAGGGAACAATGGAAAGAAACAAAAGGCTTGCAGACCGGGGTTTTTTA
CGAACTATGATCAAATACGTGAAGTTAGATTGGGGGAAATAGAAAATAAA
TGATAAAGAAATATTTATCGTCTAGCTGTTATTCAAAATACCTCGAATTT
AACAATAAAGGATCAAGAAACGATTCATGATATTCATGACGTAATGTTTT
TTTACGGAAATACCCCAGTTTTAACCAGTAGTGGCAAATTTAAACTAGAC
AAAAGTTGTATAGAATTTGCCACTACTGGCAAAAACCGGGTCTTTCCGTA
GAAAACATTATGTCAGGAATATCATGAATAGCACCTTTTGATAGAAAATC
GTTATTTCGGCTCACATAAAGCCGCCACTCCATTATTTATTCATTCATTT
CAGATGTACGAAATAATATTGGGTTGCAGTACAGTAAAAACCTACCACTT
CAAACAGCTGTGATGTTGATGCCGATAAAAATAACAGTGAAACGATTGGA
AAGAAAAGATAAATGGCGATCATTAGCCTGGATATCATATCAGTGTAGGT
GAATAACATTAGCCTGAGTTGCAAACAAGTCAACACAACATCAATGAGGT
AAGAGAACATCAGCATTAGTGAAAACATGTCATCAAAATCTTCACAGAGA
ATGGTCAGTCTGTAATAAAATAGTAATAAAAATACAGTTTTAGGTCTGAA
TTTTAACATGAGACTTAAGACTAGTAAAACGTTAGAGTCTCAGGATTTAA
AAGCTCAAACCTTTTAATTGGAATATTCAATGAAATAAAGAGGAAGTACT
AAAATAGCCAAACTCTAAATTCTGAAAAACTTTTAAATACACTAAAAATT
TCAATATATTTCGACCAAGATTCGAGCACTATTGAAAGCACTCCTGCATT
ATATTTCTCAAATCTCCACTTGGGAAGGAAACTAAAATACGATGAAGTCT
CCATAACTGGAACTCGGACGGGGAACAGAAATATTTTCGATTTAAGGAAA
TTTCGAGTAAGATTTATAATGCATTTGGACCACAAAACTTGTTCGAGCTA
AGGAGGCATTCGAGTTATAGAGGTTCGAAATAAAGAGATCCACTGTACTG
CTCAAAATAAAATAGCATTTTTGAGTATTTTTTCGTTGATCAAAATTTCA
AGTTCAGGTGAGAATGGTGATTTCAGCACTTCTACTTTTTGTCATTGGGT
TTTTCTTAGGGGGGTTTTATCGGCTTTACTAGAATATATTCTAAGCCTTA
TCTATTGGATCATTTTAGATCATTTTAGATCCTGAAATCTTAAGTTCCTA
AATTTTAAGTCTAATGTTAAAAACAGCCCTGCCTCACAGCCCCAGTGGAA
CCTGTTCCCAAGCGGTGATAAAGATTTCTATTGAAATCCCAATAGGAATA
GATATTTTATTGTTCCCAGGTCAAAAAATCTACCTTGAAAAGCACAGGCC
AAAATCATATATTGACCTGTGCCGACCAATCGAGTTTCTATTCAGCGCGC
AATCAACGCAGAGAAAAGTAACCATGACGACATCCAAGATCTTGGATGAG
GGTCATAGTCGATATATCTATTCCCGTCGTTGATTACAACTCAGAAATGT
CATCAACGCTTTTTAAAAAGAGTCAGTGATAGAGAATCGTAACACAAGAT
TTCTCTATTATTACGATCCCATTGAATTAGTATTACCATAATTAATAATT
TAGTAATTACTGTTATACATTTGGGAATCATGTAGAAGATTTCTTTTGAA
AGAAACTCATTTCGATTACACTTGGAAGTTTCGCTGGGGAATTCGTCAAT
AGTAAACATGTATACTGATATCGTCTCCTGCTAGACATTAATATGGTAAT
ATTTGCTCTTCATCTTTGATTTTTCTACAGTGATTAGATTGACACATGCG
CGATAAAATTTCTATTATTGGTCTTCAGAGGTTAGTATATTCTTTGAAAA
CTTAACCTCTGAAACTCAGTGTACAAAAAATCCGTTGGGATGGTTTTGGA
GTGTAATTTTTTAATTGAATTTCGAATTGGGATAAAAACAAAGTCAATTT
CCCAGTGGAGCTGAAATTCTAGGGTATCTTTCCCAACAGGGATAAAAGTT
TGCAGTTGGGCTGGGGTCCCAGCGGGTCTGTGACGTTTAAAACTCAGAGC
TAAAGCTTCACTTTCCAATCATTTTGGTTTTAAGATTTTGAGAAATCCCC
TTTTGTCAAGGATTAAGGCCATAGTAGAATCTTCTTATAGGCTAATCTCA
ATATACTAGACTACGTTAATCGAGGCTCGCATAATTTCGATTTTTTGAAG
TTTTTGACGCATTGCTCCTCTAACTCTTGATCATTCTCTTCAATTGCGGA
GCTTCAAGCAGAGAGGCGTCTTTTTGTACTTTTTTGTACTAAGTACGAAG
TCTTGGGTATGACCAGGCTGGGGATTGAACCCACGACCTAACGCATTGTT
TATACATGTTGTATATAGTATGAGTATGAGTTATATACGTATACGTTATT
ATACGTTGTTTTAATGGGCCATTTTATATCCATGCAGGGGGTAATCTGAG
TAGAATTTCCAGGGGGTCTTAAAGGAGTATTTTTTTTTTTCAGGGGATAA
AAAGACTGATTTTAGTTCGTTCACCCTCACTTTAAGATATGAAAATGATT
TTTCCAATGGTTCTTTTGCAAATTTTCCCATTTTCCAGGGGGCATCCACA
TGTTTCCAGGATTTTTTTTTGTCTTGAAAAGGTTCGTCCACCCTCTTTGA
CGATTTACTTGAACAGCCCAATGTTGTTTTACAAACTTTTTAATAATAAT
ACCACTCAATTCTCTCCGAAAAAAAAACATATGTAAGTTTTTACCTGAGG
TAACTTGTTCGTATGCCTTTGATAAACTTCTTACAGCATAAACCTTTGCT
TGCCTGGTGATGTTGCAATGCATCATAGAATCCTTTAAATGTGTACGTTA
ATGCATTGCAAAGGATTGTAAACAACGCTAAAGGTAGAACCAAACCTGTT
ACGAACGGGATCATGATCAAAATTTTACATAGAGATGGCAGGTAATTCTT
CTCCAAGCTTTTGTACAGGAAATTATCTGGGTATTTGTAGATCATTGTCA
TAAAAGCACTAACGTATATCAGGATTGTGATAATGAGTTTTGCCAAGAAG
AAACGACTTTTTCGAATCATTTGGCGACCTAAAATTTAAACAGTGAAAAA
CCACTAAAAGTGTCTAACAGTCATAGTCATAGGTATTTTTTACAAAAAAT
TTATAACCGAAGATATTTATTTAATCAATGCATAATATCCCGGGCTAGGA
GGGTACTAGTAGGGGACGATTTTGTCCGAACCAGAGTTCCAAAATCGATC
TTGTGAGAGACTAAATTTCGAAATTGTTCCCCTTTTTTGACGTTTTACAT
CCCTACACCCTTGCGAGGGCCTATTTTCCAATTTTCGATATTTTAAATTT
TGTATTGTTCGGAGGGCCAACTGCTGGTTTATGGTTGTTGTTTTTTTACC
CCTGTGAGAAACATTGAGAGTACCCTTAATGGCTTATAGCTCGTACATTC
CTGACACCCATTTGCCTAATTAACCCCCCAAAGGGTAATAGTTATCTTAT
GGCTCGAACGCGCGATTTACAATACGTTAAGGGAACTTATTTTGGCGGGA
ACTAATTTTAGCGGATTAAAATTAGTTCCCGCCAAAATTAAATATTTTGC
TCACTCGCCAAAATAAGTTCCCGCCAAAATTAAATTTTTTGGTTTCCTTG
CCTAAATATACCCTTGAAATTCATCAAAATTGCTCAAAATAAGGCAAAAT
AGATTTACGCTGTCATTCGCCAAAATTAGTTCCCGCCAAAATTAAAAATT
TCGTTGACTCGCCAAAATTAGTTCCCACCAAAATTAAATTTTTTCAAGAT
TTGCGCCGCTCGCCAAAATTAGTTCCCGCCAAAATAAGTTCCCTTAAGGT
AGTTGTTGTGAAAATTTGAGACTCCAGAAGTCAGATTGACACTACACATT
ATTAGTAAGCATTTCCAAACTCAATTCCTCCTAAAAGTGACACAAAGGCA
TTGTTTTAGATTATGCTAAGCCTGAAAGTTGTCGAATTTAAACTTTCAAA
ACCTTTTCAAAAATCAAGCCATTGATATAACAGAGATATAATAAGGAGTT
GACACAATATCTATGTTTCAAACTCATAGTTTCATGGTGCTCAGGCACCA
ATCATTAGTGAAAAATCAGAGATATAACACATACCTTTTTCTTGTTGATC
TGGGCAATCTGCAATGATAATATCGACGATGAACGATTCTAACTGCTCAA
TGAATTTCCACAGGAATTTCTTCTGACACAATCGCATAGTAATGGTGACT
TGAATGGCTGACTTCATCACACATAATAGGTTTACTGATCTCATGTAATA
TTGAACAAGTGAGTCTGACATATAGATATCTAAAAAAAATCAGAGTGCTT
TGAAATATTGTAGGAAATTTTACTAATCCATATTGGCCAAAGGAATGATG
CATCAGCTCTGAATACAGTTTTTGTTAAAAGCCAGAAATATACCTTAAAT
ATACTGATTTTTGCAAGAGTTAATTTTCATTGGAAAGTTTTTCTCGAGAT
CTTCTACAATCCTACAAGAAATATTTGAGACAAAGGGGAGTTCCCGGTGT
AATTTTGAACACCATAATTGATTTTTAAGCGCCTTAAACTACAGTTGGAA
AGTAGAGTTTTAACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNAAGAAAGTGGAAGTGCTAAAATAGCAA
TTCTCGCCCGAACTTTAAATTCTGAAAAACGTTAAAATACACTAAAATCT
CAATATATTTCGAGGGAGATTGTAGTGTGCTGCACACCTTTTGCCTTTTT
CGGGAAAAAAATTGCAAATTCATTGCTATTATATAAACGAAAGAATCGAA
TGCTTAGGCCTTTGCCCGAGTCTAATGTGAAAAATTGATTAGTCTCACCT
GCGCATGTACTGATGAAAATTAATATGATGAACACATTATTTGCCAGACA
ATAAATCTTGCTCAATCTATTGAATATCTTGTACCTTCCAATATCATCAA
AATAAAGTCCGGAAACTTTCATCAAGAGTAATAATGGATTCAAACATTTT
TGGAAGATTTTGCATTCTTGATCTGTTGTATTGCTAAGGTTACCATTTTT
GCCAGCTTCAATCCAAAATGGATCCAGTGGGTTTTGGTTTTCCCGCCTTT
TTGAATCAGCAACTTCGCTAGTTTCCAGGCTTCTTTGAGGAGTATCTTTA
CTTTCTTCTGAATAAACTTGATTGACTATTTGCACATTTTCCCGTCCTTT
TATTTCATCATTCATTTCCAAGCCCTTTTTTTGATGTTTGTGTTGTTTCT
TTGGAGTAATGTTGGCTCCACGCAACCAAGTTTTGATGCTTGGTAACTTA
AATGACGGATTGAATCTGCCGTGAGCCGATCTAGACATTATAGACTCTGG
GCGTCATTTCACTCGCTTTAAGAGTAACTTCTGTAACTTCTCTGGTGTAG
TTCCAGTCTTATGTTCTTAATCGTTTTTTCTCGAAACTTCTGATTTTCTG
AGTTTAGAGTCTGTTTATATAGACTTCATTTTTCTTGATCAGTGTCATCA
AAGAAAACTGACGAGAGAATCTTTTTCTTCGAAGATTTATTATTTTAAGT
TTTCCCAAAGCCTATTGGTTTCCAGAAAACTGGGAATTTTTTTGTTCAGG
AAATATAATTTTGTTTTGATCATTGAGAGTTGAGTTCTTCTAAAGGAAGA
AGATCTGTAGAGATGACTTCATTTGCTTCTTCCTGTGTGTTATATTTTCA
GAAGAAAAAAACGTCATCTTCATTTTGTCTTTTTCTTAATTGAATTTATA
ATCCTTTTACCAGAATAGTTATTATTTCAAGCCAAAGAAATGAGAACAAT
TAAAAAACAGACCTGAGCCTTGAATAAAATTAAAACAAATTTAAGGGCTA
TAACTGGTAGAATAAGGGTACAAAACCTAACTTCGCCCTGAAAGATAACA
ACATGATAAGAACAATTCGAGGCTCTTAAAATGGCAAAAACATTAAGAAC
AGCATCTAGCTTGTCGAATGTTTCGATTGTAAGCCGACTCTTCGATATAC
CTCTTCATTTTTAGCGCTGGTAGTGGCCATTACGCGAATCATGATATTTA
TTACGAAATGTTTTTTCTACGGAAGCACCACTGTTTTTGCTCTAGTATTT
GCTAACTTTAAACAATCTTTCTCTAAGTTCGACATTGTTGATGTAACCTA
TTACCCTGGAAGCAACCTTCTTCTTTATATCCAGTTACTTCGAAAAAAAA
AAAACCTCTCGGAAAGGTCGTGCTAACTAAGTCGAAACGGCGGTAGATGC
TTAGCAAGGGCGGGTGGTCGGGACCGCCAATACGCCATCACGNACGGCGG
TAGATGCTTTGCACGGGCGGACGATCGGGACCGCCAATACGCCATCACAA
TAACAGATAAGTTAAACAAGGAAGTTTAATCCCAAATACAAAACGGCCCA
TTAACTTAAATATTGAAACAATTATGTCATAATACCGAAGATGTGTGCAT
TCATTCTGTTTTCTGTTTGGAACACCTAATAGGAAATGAAAAGGGTCTCA
TAATTTTCAAAGAATTATTCCTGCGACACTATATGATTGCGGAAACGAAG
TATTCACAGAGCAACAGACTGGGCAGAGTTTTTGTAAAATGAAGACTCAA
TTCATCGTTTGTGTTAGCTTTTGTCTGGTAATAAGTGGTATGTATTAAAT
TCATTGCCCTGATGCCAAATATATGTAATTATCTTTATCATATCTAGAAT
GTAACCCTATGGAGCTGTAAAACCCCGATTTTTGTCACTACTTTTTAGCA
ATTTTTAAAGATAGAAAATATGTATGTAGTGATCTGAGTTATCTTTCCAA
CGAACGATTGAATGATATCCATCAAAATTGAAGCATTTGTTGGAAAATGA
CAGACAAAACAAAAAATTTCACACTTAAAGTTACTTAAAAATAAAATCTT
AAAATTCTAATATAGATGAATAAGGTTTTATCTTAACCCTTTAAGTTCCA
CGGTCACTTTTTAATATTTTTTTTTAAAGAAAATCGTTAGTTCAAACTTT
AAAGGCTTAAAACTCCGCTGCGTGGACCTACCTGAATGATTGAAAGGTGC
CCAGTAGTAAAACTTCAATTCCCTCTTGCAGAATCAAGTAAAGCAGAGCC
AATTTTGGAGGTTCTTGGATCACTCGTTGACCAAAACTGGTCAAAAAACG
GTCAAAATCTTTAAAAAGTGAATTTTGTCAAATTTTTGCATTGTTTTACT
TTTTGGATTGCAATCTCGCTCGAAAGACTCACTTTTGATTGATTATTTTT
GCTTGACTATAAAGCCCAAACCAATTCCTACGAGTTAGACCAGGAATGAG
GATTTCTAACTCCAACTTGGGCATTACAGGAGGGAATCGCCCTTTTTCAT
AGGCCATGTCTAGTATACTCGACATTGGCACTTAAAGGGTTAAATGTTGC
TTTGTAATCGACAGCAACATAATAGGGATCATGCGATTCATTCCACATGT
GCAACTCAATTTCTTTTTTTCTTTCTAGTGACTGGCATTGCACTGAAGCG
ACAATGTATACCATGTTCTGACTATAATCAAAATCCTTATCCTCAACAGT
GTTATTCCTGTCCTCTGTGCTATGTCTGCACTCAACCAGGTTAGTATAGT
CTATACGTCATGGGCGGTCTTATAGAACGTGTCGAACTTATCAGATGAAA
AGATTTGTAATTGTAATTTCCTTGTCTTTTAACAAGCGTTGCTTTCTTTC
GCATGTTTTTGACGCACTTGCTCTATTGTTTTAAATCCGCCAGTGTACGT
ACAGTCAGAATACATATCACTTCAGCCCAAATCTGAAGATAATTTCGCAA
AAGGGTTTTATTTGCCGAAAAAAAATTACAGCCGATAGAGTTTGACCGTC
CAAGCAAAACTGCAAAATTATTTTTATGCCAAATTGGTATCGTCCGTTTC
TTTGAAACTCTGCCATCGACGTCATAATCAGGTTTTCTTAAAAAAAACTC
TAATTATGCTGAGAAAAAAATTAAGTAACACCAAATCCAACATTCTATAT
CCAAATACGATTCCAAAAATGTATAATTTGTTATGGATTAAGAGCTGGAG
TTGGGGGCGAAAACGAAAAGTAGATTTTGAATATTTTGGGACATGCATTA
AGTTACCCGAGTGGGGAAAGAAATCAGAGTATGATTCCCCACTGGGAACG
ATATTTTGGCCATTTTTTCAGCGGGAAGGGTTTCCAGTTGGTCTGTGAGA
AAGAGGTGTCCTAATCTTACACATTTAAAATGGCATATGTGTACTTAAAG
AAAAGCAGTAAGGGCAAGGGCAATAAAAGGTTCCCATTCATTTTATCGAA
GCTATCGAAGTTACTTTGGTTAAAGTTATTTAATAAACACCCCTTTCTTT
TAAAGTAATACGGTATGCACATTAGTACGATGAAAAAATCTGGGCTTTAA
AATTGGATCCTCGTGATGCAGAAAAGTTTTTCAAGTTTGAGCGAAAGATC
TTTTGATGAATTTTTAAGTACTTCATGGTTTAATTCTCTTTTTTTACCTT
TAAAAATGCACTTTGAAGGAAGTCACGACTAAATTGTACACATTTTATTA
TCTCTTTTTCTCTTAGATGGATCTAACGCCCTCATCCCTACGCCTACACC
ACCTACAACACCGCCATCCCCACCACCTCCATCTCCAACCGTATTATCTG
GAGAAACAACACAAGCAAATCTAGCCTTTACAACAACCACTACTGCTTCC
TCATCTTCCAC

Coding sequence (CDS) from alignment at sc0000333:191298..203908-

>TCONS_00019685 ID=TCONS_00019685|Name=TCONS_00019685|organism=Clytia hemisphaerica|type=CDS|length=1536bp|location=Sequence derived from alignment at sc0000333:191298..203908- (Clytia hemisphaerica)
ATGGATCTAACGCCCTCATCCCTACGCCTACACCACCTACAACACCGCCA
TCCCCACCACCTCCATCTCCAACCGTATTATCTGGAGAAACAACACAAGC
AAATCTAGCCTTTACAACAACCACTACTGCTTCCTCATCTTCCTGACTGG
CATTGCACTGAAGCGACAATGTATACCATGTTCTGACTATAATCAAAATC
CTTATCCTCAACAGTGTTATTCCTGTCCTCTGTGCTATGTCTGCACTCAA
CCAGAATTATTCCTGCGACACTATATGATTGCGGAAACGAAGTATTCACA
GAGCAACAGACTGGGCAGAGTTTTTGTAAAATGAAGACTCAATTCATCGT
TTGTGTTAGCTTTTGTCTGGTAATAAGTGATGAGATGGATCTAACGCCCT
CATCCCTACGCCTACACCACCTACAACACCGCCATCCCCACCACCTCCAT
CTCCAACCGTATTATCTGGAGAAACAACACAAGCAAATCTAGCCTTTACA
ACAACCACTACTGCTTCCTCATCTTCCTGACTGGCATTGCACTGAAGCGA
CAATGTATACCATGTTCTGACTATAATCAAAATCCTTATCCTCAACAGTG
TTATTCCTGTCCTCTGTGCTATGTCTGCACTCAACCAGAATTATTCCTGC
GACACTATATGATTGCGGAAACGAAGTATTCACAGAGCAACAGACTGGGC
AGAGTTTTTGTAAAATGAAGACTCAATTCATCGTTTGTGTTAGCTTTTGT
CTGGTAATAAGTGATGAGATGGATCTAACGCCCTCATCCCTACGCCTACA
CCACCTACAACACCGCCATCCCCACCACCTCCATCTCCAACCGTATTATC
TGGAGAAACAACACAAGCAAATCTAGCCTTTACAACAACCACTACTGCTT
CCTCATCTTCCTGACTGGCATTGCACTGAAGCGACAATGTATACCATGTT
CTGACTATAATCAAAATCCTTATCCTCAACAGTGTTATTCCTGTCCTCTG
TGCTATGTCTGCACTCAACCAGAATTATTCCTGCGACACTATATGATTGC
GGAAACGAAGTATTCACAGAGCAACAGACTGGGCAGAGTTTTTGTAAAAT
GAAGACTCAATTCATCGTTTGTGTTAGCTTTTGTCTGGTAATAAGTGATG
AGATGGATCTAACGCCCTCATCCCTACGCCTACACCACCTACAACACCGC
CATCCCCACCACCTCCATCTCCAACCGTATTATCTGGAGAAACAACACAA
GCAAATCTAGCCTTTACAACAACCACTACTGCTTCCTCATCTTCCTGACT
GGCATTGCACTGAAGCGACAATGTATACCATGTTCTGACTATAATCAAAA
TCCTTATCCTCAACAGTGTTATTCCTGTCCTCTGTGCTATGTCTGCACTC
AACCAGAATTATTCCTGCGACACTATATGATTGCGGAAACGAAGTATTCA
CAGAGCAACAGACTGGGCAGAGTTTTTGTAAAATGAAGACTCAATTCATC
GTTTGTGTTAGCTTTTGTCTGGTAATAAGTGATGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_011077XLOC_011077Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00019685-exon-sc0000333-1575043694:203864..203908TCONS_00019685-exon-sc0000333-1575043694:203864..203908Clytia hemisphaericaexon
TCONS_00019685-exon-sc0000333-1575043694:203294..203385TCONS_00019685-exon-sc0000333-1575043694:203294..203385Clytia hemisphaericaexon
TCONS_00019685-exon-sc0000333-1575043694:202323..202391TCONS_00019685-exon-sc0000333-1575043694:202323..202391Clytia hemisphaericaexon
TCONS_00019685-exon-sc0000333-1575043694:201461..201655TCONS_00019685-exon-sc0000333-1575043694:201461..201655Clytia hemisphaericaexon
TCONS_00019685-exon-sc0000333-1575043694:193372..193496TCONS_00019685-exon-sc0000333-1575043694:193372..193496Clytia hemisphaericaexon
TCONS_00019685-exon-sc0000333-1575043694:192420..192530TCONS_00019685-exon-sc0000333-1575043694:192420..192530Clytia hemisphaericaexon
TCONS_00019685-exon-sc0000333-1575043694:191298..191442TCONS_00019685-exon-sc0000333-1575043694:191298..191442Clytia hemisphaericaexon
TCONS_00019685-exon-sc0000333-1510915933:203864..203908TCONS_00019685-exon-sc0000333-1510915933:203864..203908Clytia hemisphaericaexon
TCONS_00019685-exon-sc0000333-1510915933:203294..203385TCONS_00019685-exon-sc0000333-1510915933:203294..203385Clytia hemisphaericaexon
TCONS_00019685-exon-sc0000333-1510915933:202323..202391TCONS_00019685-exon-sc0000333-1510915933:202323..202391Clytia hemisphaericaexon
TCONS_00019685-exon-sc0000333-1510915933:201461..201655TCONS_00019685-exon-sc0000333-1510915933:201461..201655Clytia hemisphaericaexon
TCONS_00019685-exon-sc0000333-1510915933:193372..193496TCONS_00019685-exon-sc0000333-1510915933:193372..193496Clytia hemisphaericaexon
TCONS_00019685-exon-sc0000333-1510915933:192420..192530TCONS_00019685-exon-sc0000333-1510915933:192420..192530Clytia hemisphaericaexon
TCONS_00019685-exon-sc0000333-1510915933:191298..191442TCONS_00019685-exon-sc0000333-1510915933:191298..191442Clytia hemisphaericaexon
TCONS_00019685-exon-sc0000333-1491911889:203864..203908TCONS_00019685-exon-sc0000333-1491911889:203864..203908Clytia hemisphaericaexon
TCONS_00019685-exon-sc0000333-1491911889:203294..203385TCONS_00019685-exon-sc0000333-1491911889:203294..203385Clytia hemisphaericaexon
TCONS_00019685-exon-sc0000333-1491911889:202323..202391TCONS_00019685-exon-sc0000333-1491911889:202323..202391Clytia hemisphaericaexon
TCONS_00019685-exon-sc0000333-1491911889:201461..201655TCONS_00019685-exon-sc0000333-1491911889:201461..201655Clytia hemisphaericaexon
TCONS_00019685-exon-sc0000333-1491911889:193372..193496TCONS_00019685-exon-sc0000333-1491911889:193372..193496Clytia hemisphaericaexon
TCONS_00019685-exon-sc0000333-1491911889:192420..192530TCONS_00019685-exon-sc0000333-1491911889:192420..192530Clytia hemisphaericaexon
TCONS_00019685-exon-sc0000333-1491911889:191298..191442TCONS_00019685-exon-sc0000333-1491911889:191298..191442Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00019685-proteinTCONS_00019685-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000333supercontigsc0000333:191298..203908 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.33072	1.25071	0.787937	0.567396	0.237618	0	0.31841	0.281632	0.0521752	0.25851	0	0.206178	0.663976	0.436137	1.08591	1.96195	0.18592	0.0952809	0.0877317	0	0	0	0.222375	0.262571	1.2437	1.05599	1.48335	1.96203	0.392982	0.164803
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00019685 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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