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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00019665 ID=TCONS_00019665|Name=TCONS_00019665|organism=Clytia hemisphaerica|type=transcript|length=307bp
aaaaaaactaatgaacaaacgaaaaatcaaaatggcgttACTCAAACACA
TTATAACAGTAGCAATGATTTTGGTGACTTTATTTTTATATCCAGTGAAA
TGTGGGCCATGTGATTATTCTATCCGTTGGTTTGGATGTCGAACTGCACC
TCCGCCAACAACGAGGAGCACAACAACGAAAAGTCCCAGTGAAAaagtTG
CAATTTTGGCGTACACGTTATACGAAAAGCTAATGTGGAAAATGAGATCC
AAGGGTTTAGGAAAGTTGAAATCAAAACCAAGTACACTAATCAAACGCGG
TCGCAGG Run BLAST on NCBI protein sequence of TCONS_00019665-protein >TCONS_00019665-protein ID=TCONS_00019665-protein|Name=TCONS_00019665-protein|organism=Clytia hemisphaerica|type=polypeptide|length=102bp
KKLMNKRKIKMALLKHIITVAMILVTLFLYPVKCGPCDYSIRWFGCRTAP
PPTTRSTTTKSPSEKVAILAYTLYEKLMWKMRSKGLGKLKSKPSTLIKRG
RR Run BLAST on NCBI transcript from alignment at sc0000333:56173..58041- Legend: exonfive_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00019665 ID=TCONS_00019665|Name=TCONS_00019665|organism=Clytia hemisphaerica|type=transcript|length=1869bp|location=Sequence derived from alignment at sc0000333:56173..58041- (Clytia hemisphaerica)
AAAAAAACTAATGAACAAACGAAAAATCAAAATGGCGTTACTCAAACACA
TTATAACAGTAGCAATGATTTTGGTGACTTTATTTTTATATCCAGTGAAA
TGTGGGCCATGTGATTATTCTATCCGTTGGTTTGGATGTCGAACTGCACC
TCCGCCAACAACGAGGAGCACAACAACGAAAAGTCCCAGTGAAAGTAAGT
AACAATTTGTCTTGAAAATATCTTTTTTAATTTGATGAAATATAGAGCTA
ACCGAAGGTAAGTTTTCGTACTAAAAATACGCGCCCAGTTTTTTGTAAAC
GACGCTCTCTTATTCGATGAAAATCCGATTCCCCTTGAAGATCGAATTAG
AGAGCGTCAACTATATTTGGGTAAAAAAGCAAAAGAAAGGGTTTTCTATT
GATGTTTTTAACTTATGCTGTGGGCAGCTTAAACGTTTTCTAAAAAACAG
AAACAGGAACGAGTGAATATGACAAACCTGACATCCACGACAAGTCAAGA
AAATCCCGTTATGTCCTAAAACGAGAATTTTGACTCATTTTGTCTGGTCA
ATCAGTAGAAAAAATCATTTTTCTTAGTTTAAAAGTTTTACCGACTTTCT
CTAATTCGATTTTCAAAGAGCCCAATGTAAAGTTATAGTCGCATTTCACC
GAGTCTTTTGTTAGGTATTCAATAGGCCGAGAAGTCTATCAATCTAATAG
CATTGGCTCGAAATAGGGAGAGTTGTTGACGATACTTTTAAGGAAAGATA
AATTTCTATCGGTTTCTTAAAGATTAGAATCGAGATAGAGAGAACAGACG
AGAGAATCAAACCAATTTCGAAAAGGGAACTATTTTCCAATCCATTTTTT
TTTGAGATTTTGCCAGTTTTTTTGTGTGAACCATGAGAAACAACATTTCC
TTAGAAAAACTTTCGAATACTTTGCAAGCAGGATATTGAGTTATTTGCAA
ACCAACTTGCGTTTTGAGGTTTTATTGTCTTTTCTATAAAATTGATGCAA
ATGATTACTAAAATTCGGAAAAAGTAACCCCTAATAAGGTTCGAAATTGA
TGAGATCATTAGCGAAACATTTGATTAAATATTGAGCATTTTGTAAACAT
TGTCCGGTCGGGGCTTGGCGTCCGATGGGTGGCGTATAATTATAAATTGA
AAATATGTAATAAATCAGTGGTTGTTAAGATGTCATGTTATTTCATGAAA
TGGTACTCAAAAAAAATTTCCCATACTACAGCATGTGTCATTTATAGAAA
ATTTATTAAGCAACTTAAAAAAATCTTCCCATGAGTTCTCACCTTAAGTG
GGAAATAAAATCTGTCACATAAGGAAGTTACAAACTTTAAATTATTTTCA
CTTAGATGACTTTATTTAAGATCTTGAGAATTTTAGTGTATATATGACTC
ATAAGGAAACACTTTAATATCACATTTCTCCATTTAACACTTGCACGGGC
GTTGTTTTGAAGCTATTTTTCCTTCTTGATTAAAGGTTTTGTTTTTAAAT
AAGAGTGATATCGTTTGCTTACTCATCAATTTAAATTCACAAGCTTCTTC
ACATTGGATTGACACAGATGTGGAGCAAGATTGATTTTTTTGCTATATCA
GCACAATATAAAAATAGGCAGACATCGTCCTGATATGAAACATGTGTCTG
ATATGAAACGGCAACACTTATGTAAAAATAAAAGCTTTAAAATTAGATTG
AATCAAATGTGTTAGTCAAGTTATTTACCAATTCGTAATTTTGTTTTTCT
TTTTAGAAGTTGCAATTTTGGCGTACACGTTATACGAAAAGCTAATGTGG
AAAATGAGATCCAAGGGTTTAGGAAAGTTGAAATCAAAACCAAGTACACT
AATCAAACGCGGTCGCAGG Coding sequence (CDS) from alignment at sc0000333:56173..58041- >TCONS_00019665 ID=TCONS_00019665|Name=TCONS_00019665|organism=Clytia hemisphaerica|type=CDS|length=612bp|location=Sequence derived from alignment at sc0000333:56173..58041- (Clytia hemisphaerica)
AAGTTGCAATTTTGGCGTACACGTTATACGAAAAGCTAATGTGGAAAATG
AGATCCAAGGGTTTAGGAAAGTTGAAATCAAAACCAAGTACACTAATCAA
ACGCGGTCGCAGGAAAAAACTAATGAACAAACGAAAAATCAAAATGGCGT
TACTCAAACACATTATAACAGTAGCAATGATTTTGGTGACTTTATTTTTA
TATCCAGTGAAATGTGGGCCATGTGATTATTCTATCCGTTGGTTTGGATG
TCGAACTGCACCTCCGCCAACAACGAGGAGCACAACAACGAAAAGTCCCA
GTGAAAAAGTTGCAATTTTGGCGTACACGTTATACGAAAAGCTAATGTGG
AAAATGAGATCCAAGGGTTTAGGAAAGTTGAAATCAAAACCAAGTACACT
AATCAAACGCGGTCGCAGGAAAAAACTAATGAACAAACGAAAAATCAAAA
TGGCGTTACTCAAACACATTATAACAGTAGCAATGATTTTGGTGACTTTA
TTTTTATATCCAGTGAAATGTGGGCCATGTGATTATTCTATCCGTTGGTT
TGGATGTCGAACTGCACCTCCGCCAACAACGAGGAGCACAACAACGAAAA
GTCCCAGTGAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00019665-exon-sc0000333-1575043694:57848..58041 | TCONS_00019665-exon-sc0000333-1575043694:57848..58041 | Clytia hemisphaerica | exon |
| TCONS_00019665-exon-sc0000333-1575043694:56173..56285 | TCONS_00019665-exon-sc0000333-1575043694:56173..56285 | Clytia hemisphaerica | exon |
| TCONS_00019665-exon-sc0000333-1510915933:57848..58041 | TCONS_00019665-exon-sc0000333-1510915933:57848..58041 | Clytia hemisphaerica | exon |
| TCONS_00019665-exon-sc0000333-1510915933:56173..56285 | TCONS_00019665-exon-sc0000333-1510915933:56173..56285 | Clytia hemisphaerica | exon |
| TCONS_00019665-exon-sc0000333-1491911889:57848..58041 | TCONS_00019665-exon-sc0000333-1491911889:57848..58041 | Clytia hemisphaerica | exon |
| TCONS_00019665-exon-sc0000333-1491911889:56173..56285 | TCONS_00019665-exon-sc0000333-1491911889:56173..56285 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000333 | supercontig | sc0000333:56173..58041 - |
Blast
The following BLAST results are available for this feature:
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