TCONS_00019637 (transcript) - C. hemisphaerica

Overview
NameTCONS_00019637
Unique NameTCONS_00019637
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1968

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00019637 ID=TCONS_00019637|Name=TCONS_00019637|organism=Clytia hemisphaerica|type=transcript|length=1968bp
ATATTTGAAACACGAAGGAGGGGCTCTTCATACAGGGCCGCTTTTACTTG
AATACCATATTTAGGCCCGTTTAGATGCAAAATCCAGACATTTTATAAAC
AAAGTCTAGATACATTAGCAGTCGCGTAATTATGTGAAAATGGTCATTAA
GAGTCGTTATTTGTTTTTAAACACGATTTCGAGGTCTCGTAAGACCAGTA
TAAAAAGAGGCCATTTTACTGGCAGATTTCACTTTTCATCAAGAAGAGAT
CCTTGTAGACTGGAAAGAAGAATCAAGATTTTCAAGTAGAGGATTCCATC
TAAAATAGAGttTTAGTGATGTCAACACCAAAGTCATATGCAGAAATAgt
tgagattttcaaaaaaatcggTATCAACGATCCTGAAAAACTTTCGGACG
CTGACATCGAATCATTTGCCAAAAAATATGCAGGCGGGGAGCTATCTGAT
AACGATATCGAAATGTTCTGTGAAgtgagaaagaaaaacaaaacacacgA
ACAAATACCTGTTCCTGATCTACCAGAAAATCAACCTCTGACAAAGCAAG
ACTTTCAAGATCTTCCCAACCTTGATGTCGACAGCAGATTGTCATTAATC
CAAGGTGATATCGATGAGGTAGGTCGTCAACCAATTGACTTTTCAACGAT
GACTGCTGCTGATTGGATGAGAGTCATTGTAGACTGCAATATGATCTATG
CTCGAATCTTCAAAAATCTAGGTAGCGGTTTGTCAGACCTTCCCACGGAA
CCAATGTTCTTTCCCCCGAACAAATCATTGTTTGGAACCCAAGATTTCAA
AGTCTCCCAACATTCTTTGTTATACCGCCAAAAATCTGAGCTTGCCGAGC
ATTTCGATGAAAAAGCCGTCATGACAAATATCACAGCTGGAGGTTCTTTC
TCAACGCCTTGGGTATCTGGAGGTGCTGAATATTCACACGCAACGCAAAA
TCGAACAGCTGAGGTAGGTTCAAAGGTTACATCTGTGTTCAAGGTTGAAA
GTCCTGTCGGTGAATTCACTTTACCTTCTCCATCAGAGTTGGCAGAATCT
CAAATGAAGATCAACGACAACTTTGGGAATTTTGTAAAAGATTACATTGA
GCAACATGAGGACTGTACAAAAGAAGAAGTGGTCAAGGAAATGACCAGAC
GGTTTGGAGATGTCGTTCCTCGACGAGCGACAATTGGAGTTGCCTGTTAT
ACCACACAAACGACTTCAATTGAAGAAACCCAAAGTCTTGAATCTGTCTC
TGATTCCTTCAAATCCAGTGTGACTTCCAAATTCGCTTGTTTTGGTGCAA
GTGCCAACGCCGGTGGTGGTTCCAGCGAATCAGGTGAGACAGGCGATGAA
AGTCAAGAGAATAGCTATGCTTTTGCTGCCATCGCTGGAAATCTTCCTGA
CCCAAGTAATCCGATGTCAATTGGTAATTATCGAAGTATACCGAGCAGTT
GGAGGATCATACATTTAGGAGATGAATTGACCCCAGTATACGATTATCTC
AGCGGAGACGCAAAGGATAAATTGAACAGCTTGGGTGGAGCTGATACCCT
TTTCCAGAACGAATATATTGACCCAGGGAAGAAGAAAATATCAATGAATG
GAAAATATGAAGTTTTCATGCGAGAAGACGGCAACTTACAAATCCTTGGT
CCAAATGGTGAAGTACGATGGGAAACTGCCAGTTCATGTGCCCCTAATGA
GTTGAAAGGAGCTACGATAGATCTCAATGGAGTGTTATTCGTAAATGATA
TTCACTTTGCGCCTGTCTGGAGTTGCCCAGATAAATGGGGAGCATTATTC
ATGGTGATTGAAGATGATGGGTACTGGAGAGGATATAAGAATGGGGAGGT
TGTTTATCAATTTCCAGAAAACTAAGAAAACTGAAATGTTAAATTACGCA
TTTTTGTGACTACCAAAGTTTCCAATTATTTTAAaatggattaattttca
cgTGTACTTTTTTCGCGC
Run BLAST on NCBI

protein sequence of TCONS_00019637-protein

>TCONS_00019637-protein ID=TCONS_00019637-protein|Name=TCONS_00019637-protein|organism=Clytia hemisphaerica|type=polypeptide|length=518bp
MSTPKSYAEIVEIFKKIGINDPEKLSDADIESFAKKYAGGELSDNDIEMF
CEVRKKNKTHEQIPVPDLPENQPLTKQDFQDLPNLDVDSRLSLIQGDIDE
VGRQPIDFSTMTAADWMRVIVDCNMIYARIFKNLGSGLSDLPTEPMFFPP
NKSLFGTQDFKVSQHSLLYRQKSELAEHFDEKAVMTNITAGGSFSTPWVS
GGAEYSHATQNRTAEVGSKVTSVFKVESPVGEFTLPSPSELAESQMKIND
NFGNFVKDYIEQHEDCTKEEVVKEMTRRFGDVVPRRATIGVACYTTQTTS
IEETQSLESVSDSFKSSVTSKFACFGASANAGGGSSESGETGDESQENSY
AFAAIAGNLPDPSNPMSIGNYRSIPSSWRIIHLGDELTPVYDYLSGDAKD
KLNSLGGADTLFQNEYIDPGKKKISMNGKYEVFMREDGNLQILGPNGEVR
WETASSCAPNELKGATIDLNGVLFVNDIHFAPVWSCPDKWGALFMVIEDD
GYWRGYKNGEVVYQFPEN
Run BLAST on NCBI

transcript from alignment at sc0000332:315996..325712-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00019637 ID=TCONS_00019637|Name=TCONS_00019637|organism=Clytia hemisphaerica|type=transcript|length=9717bp|location=Sequence derived from alignment at sc0000332:315996..325712- (Clytia hemisphaerica)
ATATTTGAAACACGAAGGAGGGGCTCTTCATACAGGGCCGCTTTTACTTG AATACCATATTTAGGCCCGTTTAGATGCAAAATCCAGACATTTTATAAAC AAAGTCTAGATACATTAGCAGTCGCGTAATTATGTGAAAATGGTCATTAA GAGTCGTTATTTGTTTTTAAACACGATTTCGAGGTCTCGTAAGACCAGTA TAAAAAGAGGCCATTTTACTGGCAGATTTCACTTTTCATCAAGAAGAGAT CCTTGTAGACTGGAAAGAAGAATCAAGATTTTCAAGTAGAGGATTCCATC TAAAATAGAGGTAACTTTTTTAACTATATTAGTAACCGTTAGGATCCGTA ACATCTTTAGATTTTTAGGACTCGACCATAGGTGATTAGTTCGAAAGCAG ATAGAATTTCTAGTAACCCTTAGGGTGGAAAAAGGGTAGGTATGAACGAT CATTTTATCTATATATTAATAGCCGTAGTCTGTATGTCTGTTTTCTGTTT TCTGTGTGTCACTTTCGTTTTGGCAAGCAATTTTTTTGTTCTCGATAAGT TTGTTTTGATTGACAGATCGGATAAAGCTTGGTTTAGACTTTATTCAGCC TTTGTTTTGAAATTTAAGGCCCATCTACATTTAGTAATCTTATTTTTGTA GAAGCCGACTGGACCTAGGTCGGAAAAAGATTTTCAAGAGCGAAGCGTGC AAAATAACTGCTTGCAGAGTCGTTTCAAACGACACTGGTACAGTAAATGA TGGTCTTGCTGATAACTTTTGATTTAAGGGTTCTGACCATAGTCGGAAAA TTGATTTTATAGTATTTGAACATAAAAGTTATATTTTAGGTTCTTTAACA CTTTTAACAAAGAATTGCCTTTATAAATTGCTTTTTAATCAAATCTCTTA ACCCTTTAAGTGCCACGGTTATTTGTTTCTAAGTTTTTAAAGAAAATCGC TAGTTCAAACTTTAAAGGCTTATATCTCCGGATCTAGAAGGAGCTAGAAG CTCGTTTATAGTCCGTTGGATAGCTTANNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCAATTTGGGAGGGGTTGGC AGATTTCCAGGCTATATTCTGAGTCTTATTGGACTATTTTTGAACTTTTG GATCCTCAGATCCTAAGGTCATAAGTCTTGAGTCTCATGTTAAAACTACT CAGAGTTAAAACTCTACCCTTCCAACCTATTTTCAGAGCACTTAAGTACA AATCGATTGTGGTTCAAAAACTTCCCGGTGGATTTCCCTTTTTTCTCAAA TATGATGACCTTGATTGTACATTAGAGCACTTACAAATCGATTGCGGTTT CAAAACACCCCGGTGAATTTCCCTTTTGTGCCAAGTATTTTTTCACTGAT TTAATTTACCATTTTTCTGAAAAACTAGAAAATGTTGATTTCTGCTCTGC GGGGGTCCCAAATTACATGAAAACCTTCTAAATTTGTTTTAATGCATGAT TTGGGCCATTTTGAAGCGTTTGCTACTGACCAAAATCATTTTTTTGTGAA ATATTTAACTTTTTAAAAAGGTCCAATTTACGAGGAGTCAAAAACGTAAA AGTTTCAGAAAACTTTGACTTTTTTTCGAGTTTTAGCCCCTAAAATTGAC AAAAGGGGAATTTTGAGCCCGAAAAATTGCTTGAAACTTGAAATTAGACC CCCTGCTAAGCAGAAATTGGCATTTTTCAGTTTCTCAGACAATCAGTGCC ATAACATATTGGCGCTTTTGGCTAATTTACCATTTTTTGAAAATTGAAGT TCGAGCGAGAATGTCAATTTCAGGCCTTCAACTTGATTTCATCGATTATT TCGAGCTTGGAGGGATTTATTGGTTTCTAGGCTATATTTCAAGCCCTACT GGACCATTTTTGAACTTTTGGATCCTAAGGTCCTAAGTCTTAAGTCTAGA GTTAAAACTGTACCCTCCGTACCTACTTTAGAGCACTTCCAAATCGATTG TAGCTTTTTTCGAAAATTGAGCTCCGTCACATTTTGGCCATTGCCATTTT GCATCATTGTGCCAAAAATCAGAAAAAGCTAATGAGCCAATCCTGAGAAA AGCTGGTAACAGACAGACGAACGAACGGACGGACGGGTAATCTATAGGAC CTCCGAGTGTAGGTCCAGAAATTGGGATGCAAAATTGGCCAAAAAGCATT ATTTTCAAGATAAGATTTTGAAGCAAATAAGCTTTTAGAAAAATTTTCCG AAAAAATAATTTTAGTTCAGTAAAAGATACACACCATCTACTGCAAAAAT CTTTTCAAAATGTTTTTTCTTCGCGCCGAAAATAAGCTCTTCAAAGTTGT AATAATTTTTTTCGTTAAAGTCTTCATTTTCTTCTTCATCAATTTTTTTC ATTGCAATTCTTAAATTTCCAGACTCGCGGATAATTGGCCTAACAGAATA TGTATAACATGCCACAGTTTTGTGAGCTACATCAAGTAGAACTTTATATT TTGTAAGTGGTAAATATTAAAAATTCACTATGGTCAGAGCCCTTAAACAA GAAATTATGTCACGGGGGGACAGTGCACGATCCAAATATGGTTAAAAATA AGACACCTAGTGAGGGTTAGAGTCACCCGTTGTAGAGATTTCTTCTTCTT TTTTAATGGTTTTTTTAAGCCAGCTCTAACATCCAAAGGACTTTTAGTGC GTTTTTCGATTTCGCAAGCAATGTTTTGTTCTCGATAATTTTGTTTTGAT TGACAGATCGGATAGAGCCTGGTTTAGACTTTATTCAGCCTTTGTTTTGA AATTTAAGGCCTATTTACATTTATTAATTTAATAACATAAAATGCTGAGT GGGTATCGGCCTTAAATCAAAACATAAAAATTAAAAAGTTTGTCGATCAA TAACAGCATTCAAAAAAAGCGATGAAAAGCAAGAAAAGAAATTAGTCCAT CTTTTTCTTCATATAAAAACATTCAAGTGGCTGATACTGTTAAAAACTGA GTACGTCATTTTACATGTTTAAATTCGAAAAGTTATGACAAGGATTAAAA AAAATCAGTTTAGAATCGGTTAGTGTAAAACACAGGTCACAGGTGTTGAC AGGTCAACAGTTGTTAATGTCAAAAATATAATTCCAAAGGTATTTTATTG ATCTAGAACTATTTTAAAGCTAAAAATCTACCCACGTGCTTACCACGTGA TTTCGCGTTTTGTGCTGTGTATAACACGGACCTGTATTATAATATATTAC ATCTATATCACACATGTAAAAAAATTATCTTTTCAATGTTATACGCATGT TACGTATGTTATATACAAAGAATAGGGTTGTTTTAAAAGGTGGTGCCGCA CCATAGGGTACTTGGTGTACCTTATGGTCTACCCCGAAAAAAACTTACAG ACCAGACTGGAAAATAATACGAAAAATATTTTCTCCAACCGCATGTCATT TAAAGCATTTCATTAGTCTACAATTATGTAATCTTTGATCAAAATGATGG AAACTCACATGTGGTCTTTTGATGCAACAAAAAAGCAGGCTGTCTAACCG CAATCAGAAAATATCGGGAAATAACATAAACAATACGTTTCCTAACCCCA ATTTCATCATGGATATTCTTAACTTTTTTGAGAAAATCATCCTAAAATAT TCTTAAAGCATTCTTAGATTAGGATCCTAATTCAGACGAGATTTAACATT TAGTACATACGTCTCAAAATTCCATGACGGTGATATTCTTAGCATATTCT TAATTATTTGGCCATTTTCATCATGGACATTCTTATAAAGTGCATTCTTA TGAGATTCTTCCACGCATGGTATATAAAACAAGAAAATGTTGTTTTTTCA GCGAAATTTTATTCAGGAACCATTGTTATTGATATTGGGAAGTATTTAAG GCTTGAACAGTCAGTTTAGCTACGAAGATAGTAAGTTGTCATGATGTGGG AATGAGAAATCAGGGTAGACCATAAGGTACACCATTGGGGTACCCCATGG TGCGGCACCACCTTTTAAACAACCCCAAAGAATAAAAAAATATTCGAATA TCGATCTCACCTTTGCTTTAAACAGCCCCCTAACAGGGAAATAGCTATTT CACAATCACTATGTCATATCTCATTTTATCCCCAGCATAATCTTGGGTAC GATAACAAGAATTGATGAAAATAGCGTCAATGAGATTATATTCTATAAAT AATTCAATATTTTTATCCCCTCCTTTGTATTTTTGATAAATTAACGTCAC TATTTTCATGTCTCTAAAACAGCTCTCTTTGAGTATTTGTTGTTTTCAAA ACCTGTCAATCTATATCCACTTGCAGCGTCAGCATCCTATTATGTATGAA GAATATTTTATTGTTAATTGGTGTACAGAACCTCATAACTTTGAGATAAC ATCATTATTTACATAATTTAAGTGTCATTTGTTGTCAATATTTGGGGTTG ATGATTTGTCGTATATTAAGTCTTCTAAATAAAATATTTTGATATTACAT TTCCATTACATATAATATTTTCAAAAACTTATGTTATGAGTTGTATGTTA CGAGTGTTTCACAGTTTTCCGGTCTGTAATTTGTATGAACTGTAACCTGT GACCCGTGACCTGTGACCCGTGAACTGTGACCCGTGACCTGTGAGCTGTG TTTTACACTAACCGATTTAGAATTGACTTATTTATCTTTTTAAGGTACAT GTACATCTTTTTTCCGATTTTTTGTCAAAAAAAATTTTTCAATCAAAGTG GAAGAAAAGTTACTGGATTTCATTTTGGTAAAATCGCGATCTTAAAATCT TTTTTTGATCCAGAGTTATAACCATTTAAATTTCAAAACAAAGTNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNAGTAATATTTTTGACACATTTCACTGATT ACTCAAATAAACAGCAATCATCTCGTTAAAAATTTCAAATTGATGTAGAA AAAAACGAAATTTTACCACACCATACTATATCTTTTAACGAAGTTAAATT CACCCATAGCATTTAGATAACCCATAGCATTTAGATATCGACTTCATTCT TTTTTTATGAGATTCCCAAAAGATCAAACTTAAAAAGTGTCTTAGGATTT AATTTCTAACCGAGTTGTTTTTCCTCAATTTACAGATAACTGAAAAAAAT CACATTTAAATTTACTTTTTTATCGATATTTTTACAGAATTTAGGATTTA TAGAGTTAAAGTCAATTCCAAAAAAATCCCAAGACACTTTTTTAGTTCAA TCTATTGGGAACATAGTATCGAAATTATTTTTTCAAAATTCAAAAGCTAT GGGTGACTTTAACTTCTTTGAAGTAGGTAAGGTTAAAATTCTTAAGATTT TAATTATATCCTGCCCAGTTTTTTTAAATTTAGCTGAAACTTTTACCATT AGAAAGAGAATATTATTGGCTTTCAGAAAATATATACTTTTGATATATAA AAATTTGTTGTTCTAAAGATATGATCAATTAAAGAAAATGTGTCAAGAAA GGTGAACACCTTAAATCTGATAAAAACTAAGTTGCACTATTCTTTGTGGC TTTCCCGCTTTTTCCTGAAGAATTGTCATTTCTACATTTCACTCCTGCTC TTTACCATGACATTTTCTCTAATTGTCGAAAACTGGACGGCGTATTTAGT GCGAGCGACAAAAAGATTTCCCGGGGAGGGTTCGAGGGTTAGAGTCAAAC TTTGAAGATATCTTTTTATTCATTTGATCGTTTTTTAAACCAGCTTCAAC ATCAAAAGGACTTTTAGTGCGTTCAGCTACGGCTTAACCGGCGTGCGACA GCAGGTAATAGCTAGTTACTTATTATTGCCAACCCAAAAAAATATCAGCG TTTTGATTGGTCGAGAGCATCGAGATATTTGCGATATTTCATATTTCTTT AGTCTGGAAATATGACCGCGTTGACTTTTGGGGGACTGGGTAAGCGGCGG GAGAAAAATCAAAACAAAACAGCCAAAAAGAACTGACTTTCAGAGAAACT GGCTTGGGAATCAGAGGGAAAAAGGCAACAAAATTATGTTCAGATTAACT TCCAATTTGGAGTTCTTCCATAAAAGACACTAAAATCAAATCTGATGAAC TAAGAATTTATTATAAAACTACTTGACACGACCCAAATATTTTCAACTTT TGGCAAATTTGTGATAACCAAACAGTTTTTTATCAATGCATACGAAAAAA ACTTGAGATTCTTGAATATTTGCAAATAAAATTTCCCATAACATAACAAA GAAAGTGAAATGTCTTGTATGTTGTATTAAACCAAATGACGAGTGATTTT TATAAAAGTTCTCTCCTAATTCTCGTTCTCAACAACGTAGTAGTCTACGT CCTTGACTTTTCAACTCAACAATCATTACATCTTCCTTCTAAAATTCGAA ACATTTAGAGCTTGACGATAATCAAGAAAATATCCAAATTGTTTTACTGT TCAAAAAATGTTGTTCTTTAACCATTATTACAAGCATATATTTCCAACGT GGGACTCCTTTCCTCTGCTATTCTTTCCCATGGCCATGTCATCGAAACAA AAACATCGAAAAAGACTGAATGTTATCAATCTGTTTAATCCAATGATGGA GGGTTTCTTCTCTATCGAAACAATACATCATCTGCGTTTTGAATTATCAA TCTAGAAACTTTCAAATACGTACTAGTTATCGCATGACTTCGAGTGCAAT ACGAGAAATATTTCACGAGTTCCGAGATTTTTCCGTGGAACGAGTAAAAT ATCGAGTATTGCACGAGAAGTCATGTGATAACTAATTTATTGTCTTCTTT TTGTTTTAAAACTTACTTCCGCCTTCTTCTGCTTCTGTGTAGTTTCAAAA GTTTTTATTNGACTCAAAAAATTGTCTTCTTTTTGTTTTAAAACTTACTT CCGCCTTCTTCTGCTTCTGTGTAGTTTCAAAAGTTTTTATTCGAAAATCT AATTCGAACGTTAGATTCGAACAAAAACATTCGATAACTTCCCGCCGAAA ATATTCACACAAAAACAAAACTTTTTCGATCATTTTCAATCCAGAAGTTT TGTTTTGAAGAGTTGCAGATATTTCAGAGAATTTTTTTGAGTCGACAATA AATTAGTTATCACATGACTTCTCGTGCAATACTCGATATTTTACTCGTTC CGAGATTTCACCAATATTTTTCCTCGCCTAAAGGCTCGGAAAAATATTAC GGAAAAATCTCGGAACTCGTGAAATATTTTTCGTATTGCACTCGAAGTCA TGCGATAATTAGTATTTATTACTTATTCAAATTTTCATTTCAGTTTTAGT GATGTCAACACCAAAGTCATATGCAGAAATAGTTGAGATTTTCAAAAAAA TCGGTATCAACGATCCTGAAAAACTTTCGGACGCTGACATCGAATCATTT GCCAAAAAATATGCAGGCGGGGAGCTATCTGATAACGATATCGAAATGTT CTGTGAAGTGAGAAAGAAAAACAAAACACACGAACAAATACCTGTTCCTG ATCTACCAGAAAATCAACCTCTGACAAAGCAAGACTTTCAAGATCTTCCC AACCTTGATGTCGACAGCAGATTGTCATTAATCCAAGGTGATATCGATGA GGTAGGTCGTCAACCAATTGACTTTTCAACGATGACTGCTGCTGATTGGA TGAGAGTCATTGTAGACTGCAATATGATCTATGCTCGAATCTTCAAAAAT CTAGGTAGCGGTTTGTCAGACCTTCCCACGGAACCAATGTTCTTTCCCCC GAACAAATCATTGTTTGGAACCCAAGATTTCAAAGTCTCCCAACATTCTT TGTTATACCGCCAAAAATCTGAGCTTGCCGAGCATTTCGATGAAAAAGCC GTCATGACAAATATCACAGCTGGAGGTTCTTTCTCAACGCCTTGGGTATC TGGAGGTGCTGAATATTCACACGCAACGCAAAATCGAACAGCTGAGGTAG GTTCAAAGGTTACATCTGTGTTCAAGGTTGAAAGTCCTGTCGGTGAATTC ACTTTACCTTCTCCATCAGAGTTGGCAGAATCTCAAATGAAGATCAACGA CAACTTTGGGAATTTTGTAAAAGATTACATTGAGCAACATGAGGACTGTA CAAAAGAAGAAGTGGTCAAGGAAATGACCAGACGGTTTGGAGATGTCGTT CCTCGACGAGCGACAATTGGAGTTGCCTGTTATACCACACAAACGACTTC AATTGAAGAAACCCAAAGTCTTGAATCTGTCTCTGATTCCTTCAAATCCA GTGTGACTTCCAAATTCGCTTGTTTTGGTGCAAGTGCCAACGCCGGTGGT GGTTCCAGCGAATCAGGTGAGACAGGCGATGAAAGTCAAGAGAATAGCTA TGCTTTTGCTGCCATCGCTGGAAATCTTCCTGACCCAAGTAATCCGATGT CAATTGGTAATTATCGAAGTATACCGAGCAGTTGGAGGATCATACATTTA GGAGATGAATTGACCCCAGTATACGATTATCTCAGCGGAGACGCAAAGGA TAAATTGAACAGCTGTAAGTATATTTTTTCTTTGACATTCAATGAAAAGA TTTTTCTTCCAACCATTAAATCAATAGAAACAATGGATATACTTTTTTAC TCGTCATTTTCACCAGTGAAGGATGTCAACCATATACGACATATACATAT ACGTGTGTGAAATTCTTTTTTGATGACGCGCGGGTGGTTGGTTCTGATTT TAAAGCTGTGACTGTAAGTAAGGTTGTAGAACTAATACCTTGTCAAAGTT TCACGTCCGTAACACTTTTCAATGTTGAGATTTACACACTGTCTGTAAAA TACAAGATACCAGCAGGAGGCAAAAAAGCCCCCTAAAAAAACATATTGCC GTGCAAAATTTGAACAGAAAAAGCGAACGTGAAAAAAGTCAAGGGGGTCC TCTCTTTCGCATTTTATGGAACGATGACGTCATCGGGTGGAGATAATGCA TATATAAAATTGATCAAATCTTATTTTTAGTGGGTGGAGCTGATACCCTT TTCCAGAACGAATATATTGACCCAGGGAAGAAGAAAATATCAATGAATGG AAAATATGAAGTTTTCATGCGAGAAGACGGCAACTTACAAATCCTTGGTC CAAATGGTGAAGTACGATGGGAAACTGCCAGTTCATGTGCCCCTAATGAG TTGAAAGGAGCTACGATAGATCTCAATGGAGTGTTATTCGTAAATGATAT TCACTTTGCGCCTGTCTGGAGTTGCCCAGATAAATGGGGAGCATTATTCA TGGTGATTGAAGATGATGGGTACTGGAGAGGATATAAGAATGGGGAGGTT GTTTATCAATTTCCAGAAAACTAAGAAAACTGAAATGTTAAATTACGCAT TTTTGTGACTACCAAAGTTTCCAATTATTTTAAAATGGATTAATTTTCAC GTGTACTTTTTTCGCGC

Coding sequence (CDS) from alignment at sc0000332:315996..325712-

>TCONS_00019637 ID=TCONS_00019637|Name=TCONS_00019637|organism=Clytia hemisphaerica|type=CDS|length=3114bp|location=Sequence derived from alignment at sc0000332:315996..325712- (Clytia hemisphaerica)
TGGGTGGAGCTGATACCCTTTTCCAGAACGAATATATTGACCCAGGGAAG
AAGAAAATATCAATGAATGGAAAATATGAAGTTTTCATGCGAGAAGACGG
CAACTTACAAATCCTTGGTCCAAATGGTGAAGTACGATGGGAAACTGCCA
GTTCATGTGCCCCTAATGAGTTGAAAGGAGCTACGATAGATCTCAATGGA
GTGTTATTCGTAAATGATATTCACTTTGCGCCTGTCTGGAGTTGCCCAGA
TAAATGGGGAGCATTATTCATGGTGATTGAAGATGATGGGTACTGGAGAG
GATATAAGAATGGGGAGGTTGTTTATCAATTTCCAGAAAACTAAATGTCA
ACACCAAAGTCATATGCAGAAATAGTTGAGATTTTCAAAAAAATCGGTAT
CAACGATCCTGAAAAACTTTCGGACGCTGACATCGAATCATTTGCCAAAA
AATATGCAGGCGGGGAGCTATCTGATAACGATATCGAAATGTTCTGTGAA
GTGAGAAAGAAAAACAAAACACACGAACAAATACCTGTTCCTGATCTACC
AGAAAATCAACCTCTGACAAAGCAAGACTTTCAAGATCTTCCCAACCTTG
ATGTCGACAGCAGATTGTCATTAATCCAAGGTGATATCGATGAGGTAGGT
CGTCAACCAATTGACTTTTCAACGATGACTGCTGCTGATTGGATGAGAGT
CATTGTAGACTGCAATATGATCTATGCTCGAATCTTCAAAAATCTAGGTA
GCGGTTTGTCAGACCTTCCCACGGAACCAATGTTCTTTCCCCCGAACAAA
TCATTGTTTGGAACCCAAGATTTCAAAGTCTCCCAACATTCTTTGTTATA
CCGCCAAAAATCTGAGCTTGCCGAGCATTTCGATGAAAAAGCCGTCATGA
CAAATATCACAGCTGGAGGTTCTTTCTCAACGCCTTGGGTATCTGGAGGT
GCTGAATATTCACACGCAACGCAAAATCGAACAGCTGAGGTAGGTTCAAA
GGTTACATCTGTGTTCAAGGTTGAAAGTCCTGTCGGTGAATTCACTTTAC
CTTCTCCATCAGAGTTGGCAGAATCTCAAATGAAGATCAACGACAACTTT
GGGAATTTTGTAAAAGATTACATTGAGCAACATGAGGACTGTACAAAAGA
AGAAGTGGTCAAGGAAATGACCAGACGGTTTGGAGATGTCGTTCCTCGAC
GAGCGACAATTGGAGTTGCCTGTTATACCACACAAACGACTTCAATTGAA
GAAACCCAAAGTCTTGAATCTGTCTCTGATTCCTTCAAATCCAGTGTGAC
TTCCAAATTCGCTTGTTTTGGTGCAAGTGCCAACGCCGGTGGTGGTTCCA
GCGAATCAGGTGAGACAGGCGATGAAAGTCAAGAGAATAGCTATGCTTTT
GCTGCCATCGCTGGAAATCTTCCTGACCCAAGTAATCCGATGTCAATTGG
TAATTATCGAAGTATACCGAGCAGTTGGAGGATCATACATTTAGGAGATG
AATTGACCCCAGTATACGATTATCTCAGCGGAGACGCAAAGGATAAATTG
AACAGCTTGGGTGGAGCTGATACCCTTTTCCAGAACGAATATATTGACCC
AGGGAAGAAGAAAATATCAATGAATGGAAAATATGAAGTTTTCATGCGAG
AAGACGGCAACTTACAAATCCTTGGTCCAAATGGTGAAGTACGATGGGAA
ACTGCCAGTTCATGTGCCCCTAATGAGTTGAAAGGAGCTACGATAGATCT
CAATGGAGTGTTATTCGTAAATGATATTCACTTTGCGCCTGTCTGGAGTT
GCCCAGATAAATGGGGAGCATTATTCATGGTGATTGAAGATGATGGGTAC
TGGAGAGGATATAAGAATGGGGAGGTTGTTTATCAATTTCCAGAAAACTA
AATGTCAACACCAAAGTCATATGCAGAAATAGTTGAGATTTTCAAAAAAA
TCGGTATCAACGATCCTGAAAAACTTTCGGACGCTGACATCGAATCATTT
GCCAAAAAATATGCAGGCGGGGAGCTATCTGATAACGATATCGAAATGTT
CTGTGAAGTGAGAAAGAAAAACAAAACACACGAACAAATACCTGTTCCTG
ATCTACCAGAAAATCAACCTCTGACAAAGCAAGACTTTCAAGATCTTCCC
AACCTTGATGTCGACAGCAGATTGTCATTAATCCAAGGTGATATCGATGA
GGTAGGTCGTCAACCAATTGACTTTTCAACGATGACTGCTGCTGATTGGA
TGAGAGTCATTGTAGACTGCAATATGATCTATGCTCGAATCTTCAAAAAT
CTAGGTAGCGGTTTGTCAGACCTTCCCACGGAACCAATGTTCTTTCCCCC
GAACAAATCATTGTTTGGAACCCAAGATTTCAAAGTCTCCCAACATTCTT
TGTTATACCGCCAAAAATCTGAGCTTGCCGAGCATTTCGATGAAAAAGCC
GTCATGACAAATATCACAGCTGGAGGTTCTTTCTCAACGCCTTGGGTATC
TGGAGGTGCTGAATATTCACACGCAACGCAAAATCGAACAGCTGAGGTAG
GTTCAAAGGTTACATCTGTGTTCAAGGTTGAAAGTCCTGTCGGTGAATTC
ACTTTACCTTCTCCATCAGAGTTGGCAGAATCTCAAATGAAGATCAACGA
CAACTTTGGGAATTTTGTAAAAGATTACATTGAGCAACATGAGGACTGTA
CAAAAGAAGAAGTGGTCAAGGAAATGACCAGACGGTTTGGAGATGTCGTT
CCTCGACGAGCGACAATTGGAGTTGCCTGTTATACCACACAAACGACTTC
AATTGAAGAAACCCAAAGTCTTGAATCTGTCTCTGATTCCTTCAAATCCA
GTGTGACTTCCAAATTCGCTTGTTTTGGTGCAAGTGCCAACGCCGGTGGT
GGTTCCAGCGAATCAGGTGAGACAGGCGATGAAAGTCAAGAGAATAGCTA
TGCTTTTGCTGCCATCGCTGGAAATCTTCCTGACCCAAGTAATCCGATGT
CAATTGGTAATTATCGAAGTATACCGAGCAGTTGGAGGATCATACATTTA
GGAGATGAATTGACCCCAGTATACGATTATCTCAGCGGAGACGCAAAGGA
TAAATTGAACAGCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_011048XLOC_011048Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00019637-proteinTCONS_00019637-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00019637-exon-sc0000332-1575043694:325403..325712TCONS_00019637-exon-sc0000332-1575043694:325403..325712Clytia hemisphaericaexon
TCONS_00019637-exon-sc0000332-1575043694:316899..318119TCONS_00019637-exon-sc0000332-1575043694:316899..318119Clytia hemisphaericaexon
TCONS_00019637-exon-sc0000332-1575043694:315996..316432TCONS_00019637-exon-sc0000332-1575043694:315996..316432Clytia hemisphaericaexon
TCONS_00019637-exon-sc0000332-1510915933:325403..325712TCONS_00019637-exon-sc0000332-1510915933:325403..325712Clytia hemisphaericaexon
TCONS_00019637-exon-sc0000332-1510915933:316899..318119TCONS_00019637-exon-sc0000332-1510915933:316899..318119Clytia hemisphaericaexon
TCONS_00019637-exon-sc0000332-1510915933:315996..316432TCONS_00019637-exon-sc0000332-1510915933:315996..316432Clytia hemisphaericaexon
TCONS_00019637-exon-sc0000332-1491911889:325403..325712TCONS_00019637-exon-sc0000332-1491911889:325403..325712Clytia hemisphaericaexon
TCONS_00019637-exon-sc0000332-1491911889:316899..318119TCONS_00019637-exon-sc0000332-1491911889:316899..318119Clytia hemisphaericaexon
TCONS_00019637-exon-sc0000332-1491911889:315996..316432TCONS_00019637-exon-sc0000332-1491911889:315996..316432Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000332supercontigsc0000332:315996..325712 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.855363 0.723368 0.48129 0.185587 12.1884 8.40009 6.63609 4.97683 0.823915 0.927119 0.602851 0.77033 4.09795 2.11769 10.3645 9.10434 6.87793 12.5301 143.708 227.863 0.396581 0.436115 1.07823 1.35669 0.782726 1.03868 4.6731 3.81509 1.79495 1.45333
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001480Bulb-type_lectin_dom
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00019637 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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