|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00019544 ID=TCONS_00019544|Name=TCONS_00019544|organism=Clytia hemisphaerica|type=transcript|length=1202bp
cTTCAGATTTTatagtttgaatttgttttggtAATTTATTCCAATATTTG
GTCACAGTGGTAACAAATGAGTTTGAGTAAGCAAGAATTCTTCCTAATCA
CTATTCACAAAACGAGCTGCTTTTCTTTGGACTGATTCAAGCTCCTCTCG
CAGACCAGAGTTGGATGGACCTGTAGGATTCCATACACTAGATGCATACA
TTATCATTGGCAGAACATACGTCTTGTAAGCTtgaatttttgctttcttt
gaaCAACAACAGAGTGTTCGCTGTAAGAAACATCTCTTCTGGTGAGCTTT
GGTACATATTGATGAAACGTGCTTGTTCCACCTCAACTTTTTGTGGAGTG
TAAGACCAAAATACTTTGCCGATTCGACCGAGTCGAGCTCCTCACCATGA
ATTGTGTACGAGGTTGAAATGGGCTTCAGTTTGTTTGTGATTGATAACAA
TACATGGATTTCTTTCCAGACAACTCTTTTACCAGATTCCAAGCGTTTCT
ACTGTCAGTAGACGACTTACTTTTCGAATAATTTGAGCGTGTCGTTTATT
CTTAATTCTCTTCAAGAACATTGTGAgttgttttaatattttgttatttG
GCTTGGATGTTTTGGACTGGTGCAGTAATGGATTCTTTCCGACATTTCTC
GAGGATATCTTCTGAGATAGAAGCTTCAATTTTCTTCTTAGGCCTTCTTG
GTTAGATACTTTCAAAAATTCTGAGTAGTTTTTTGACATATCAGGAAGAG
CATTGAACTTAGCAGTAATGTTTGCACCGATCCTAGAGCCAAGATCAAGA
TGTCATTTCGTATGGCTTGCCAATTAAGACGTTTTGACCGGTTAGGCTTT
GGTGCTCGAAAACTCATTTGAATCATAGTCGATACAATGCGATGATCACT
TCCAATTGGATTGGAAGACGAGTAAGCTTGGCAGTTGGGGATGCTGTTTC
GCCAACGTTTCCTATACATGCAGTAGTCTATCTGTGCAAGATCTCCACGT
GGTGATCACCAGGTCCAGAGCTTCTTGCGAAGCTTTTGAAAAGTGATGTT
GCCTACGACCAGATTATGTTGTTTTGCAAATTCACGTAAATATTTGCCGT
TTCTGTTAAAATCATCATGGAAGGAAAATTTGCCTTCTAGTCTAGCATTG
AAATCTCCTTGGATTAGTAACATGTTGTGATGAGGTATGGCTTCAGTTAT
CA Run BLAST on NCBI transcript from alignment at sc0000329:58032..59233 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00019544 ID=TCONS_00019544|Name=TCONS_00019544|organism=Clytia hemisphaerica|type=transcript|length=1202bp|location=Sequence derived from alignment at sc0000329:58032..59233 (Clytia hemisphaerica)
TGATAACTGAAGCCATACCTCATCACAACATGTTACTAATCCAAGGAGAT
TTCAATGCTAGACTAGAAGGCAAATTTTCCTTCCATGATGATTTTAACAG
AAACGGCAAATATTTACGTGAATTTGCAAAACAACATAATCTGGTCGTAG
GCAACATCACTTTTCAAAAGCTTCGCAAGAAGCTCTGGACCTGGTGATCA
CCACGTGGAGATCTTGCACAGATAGACTACTGCATGTATAGGAAACGTTG
GCGAAACAGCATCCCCAACTGCCAAGCTTACTCGTCTTCCAATCCAATTG
GAAGTGATCATCGCATTGTATCGACTATGATTCAAATGAGTTTTCGAGCA
CCAAAGCCTAACCGGTCAAAACGTCTTAATTGGCAAGCCATACGAAATGA
CATCTTGATCTTGGCTCTAGGATCGGTGCAAACATTACTGCTAAGTTCAA
TGCTCTTCCTGATATGTCAAAAAACTACTCAGAATTTTTGAAAGTATCTA
ACCAAGAAGGCCTAAGAAGAAAATTGAAGCTTCTATCTCAGAAGATATCC
TCGAGAAATGTCGGAAAGAATCCATTACTGCACCAGTCCAAAACATCCAA
GCCaaataacaaaatattaaaacaacTCACAATGTTCTTGAAGAGAATTA
AGAATAAACGACACGCTCAAATTATTCGAAAAGTAAGTCGTCTACTGACA
GTAGAAACGCTTGGAATCTGGTAAAAGAGTTGTCTGGAAAGAAATCCATG
TATTGTTATCAATCACAAACAAACTGAAGCCCATTTCAACCTCGTACACA
ATTCATGGTGAGGAGCTCGACTCGGTCGAATCGGCAAAGTATTTTGGTCT
TACACTCCACAAAAAGTTGAGGTGGAACAAGCACGTTTCATCAATATGTA
CCAAAGCTCACCAGAAGAGATGTTTCTTACAGCGAACACTCTGTTGTTGt
tcaaagaaagcaaaaattcaAGCTTACAAGACGTATGTTCTGCCAATGAT
AATGTATGCATCTAGTGTATGGAATCCTACAGGTCCATCCAACTCTGGTC
TGCGAGAGGAGCTTGAATCAGTCCAAAGAAAAGCAGCTCGTTTTGTGAAT
AGTGATTAGGAAGAATTCTTGCTTACTCAAACTCATTTGTTACCACTGTG
ACCAAATATTGGAATAAATTaccaaaacaaattcaaactatAAAATCTGA
Ag
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00019544-exon-sc0000329-1491911889:58032..59233 | TCONS_00019544-exon-sc0000329-1491911889:58032..59233 | Clytia hemisphaerica | exon |
| TCONS_00019544-exon-sc0000329-1510915933:58032..59233 | TCONS_00019544-exon-sc0000329-1510915933:58032..59233 | Clytia hemisphaerica | exon |
| TCONS_00019544-exon-sc0000329-1575043694:58032..59233 | TCONS_00019544-exon-sc0000329-1575043694:58032..59233 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000329 | supercontig | sc0000329:58032..59233 . |
Blast
The following BLAST results are available for this feature:
|
