TCONS_00019491 (transcript) - C. hemisphaerica

Overview
NameTCONS_00019491
Unique NameTCONS_00019491
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length246

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00019491 ID=TCONS_00019491|Name=TCONS_00019491|organism=Clytia hemisphaerica|type=transcript|length=246bp
TTGATCTTGTAAAGTTTTAGGAGAAGATTCTTTACCCTTTCACTAAGCTG
CCTGAACCAAAACTTTTCCAAAATGTGAATTATTGGGGCTAAAAATGACT
CTTTTGTATGTTTATGGAAAGTTAGCCTCATTCTTACACAAAAGTGACTA
TCACCAAAAGATCTATGAATTTAAGCTGAAGATGCCCCATAGTATTGCCC
AGTATAATTATGTGAAACAATTTCTGATCAGAAGTGTGAAATATTG
Run BLAST on NCBI

transcript from alignment at sc0000328:2188..2433

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00019491 ID=TCONS_00019491|Name=TCONS_00019491|organism=Clytia hemisphaerica|type=transcript|length=246bp|location=Sequence derived from alignment at sc0000328:2188..2433 (Clytia hemisphaerica)
CAATATTTCACACTTCTGATCAGAAATTGTTTCACATAATTATACTGGGC
AATACTATGGGGCATCTTCAGCTTAAATTCATAGATCTTTTGGTGATAGT
CACTTTTGTGTAAGAATGAGGCTAACTTTCCATAAACATACAAAAGAGTC
ATTTTTAGCCCCAATAATTCACATTTTGGAAAAGTTTTGGTTCAGGCAGC
TTAGTGAAAGGGTAAAGAATCTTCTCCTAAAACTTTACAAGATCAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_010951XLOC_010951Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00019491-exon-sc0000328-1491911889:2188..2433TCONS_00019491-exon-sc0000328-1491911889:2188..2433Clytia hemisphaericaexon
TCONS_00019491-exon-sc0000328-1510915933:2188..2433TCONS_00019491-exon-sc0000328-1510915933:2188..2433Clytia hemisphaericaexon
TCONS_00019491-exon-sc0000328-1575043694:2188..2433TCONS_00019491-exon-sc0000328-1575043694:2188..2433Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000328supercontigsc0000328:2188..2433 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.816926	1.59326	1.84993	3.7703	1.10167	0.870555	0	1.96653	1.87239	0.852704	6.19466	0	1.08662	2.50136	1.23071	0.995623	0	0	7.54344	0	1.5797	0	0.936671	0	0	0.782788	0	0	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00019491 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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