TCONS_00019490 (transcript) - C. hemisphaerica

Overview
NameTCONS_00019490
Unique NameTCONS_00019490
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length100

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00019490 ID=TCONS_00019490|Name=TCONS_00019490|organism=Clytia hemisphaerica|type=transcript|length=100bp
GTGTAGAATATGGGTTAAAATGTGGCTAAAGTACTCGAACTCTCTATTAT
ctaaaattatccaaaattagtgaaaaatcgctaaaaatatAACATAAATA
Run BLAST on NCBI

transcript from alignment at sc0000328:1438..1537

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00019490 ID=TCONS_00019490|Name=TCONS_00019490|organism=Clytia hemisphaerica|type=transcript|length=100bp|location=Sequence derived from alignment at sc0000328:1438..1537 (Clytia hemisphaerica)
TATTTATGTTatatttttagcgatttttcactaattttggataattttag
ATAATAGAGAGTTCGAGTACTTTAGCCACATTTTAACCCATATTCTACAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_010950XLOC_010950Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00019490-exon-sc0000328-1491911889:1438..1537TCONS_00019490-exon-sc0000328-1491911889:1438..1537Clytia hemisphaericaexon
TCONS_00019490-exon-sc0000328-1510915933:1438..1537TCONS_00019490-exon-sc0000328-1510915933:1438..1537Clytia hemisphaericaexon
TCONS_00019490-exon-sc0000328-1575043694:1438..1537TCONS_00019490-exon-sc0000328-1575043694:1438..1537Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000328supercontigsc0000328:1438..1537 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00019490 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top