TCONS_00019446 (transcript) - C. hemisphaerica

Overview
NameTCONS_00019446
Unique NameTCONS_00019446
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length161

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00019446 ID=TCONS_00019446|Name=TCONS_00019446|organism=Clytia hemisphaerica|type=transcript|length=161bp
TACAGGGATAAAGACGCTGACTCTATTGGGGAAAGAGATAGAATTTAGTT
TTTTAAGAGTTTGTAGTTTCTNTACAAAATCTATCCCTGAAAATTAATAT
TTCAAATGCATCTTTGACCtataaaaatgaattattaaaTTTCAATGAAT
ATACCATATGA
Run BLAST on NCBI

transcript from alignment at sc0000326:272512..272672

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00019446 ID=TCONS_00019446|Name=TCONS_00019446|organism=Clytia hemisphaerica|type=transcript|length=161bp|location=Sequence derived from alignment at sc0000326:272512..272672 (Clytia hemisphaerica)
TCATATGGTATATTCATTGAAAtttaataattcatttttataGGTCAAAG
ATGCATTTGAAATATTAATTTTCAGGGATAGATTTTGTANAGAAACTACA
AACTCTTAAAAAACTAAATTCTATCTCTTTCCCCAATAGAGTCAGCGTCT
TTATCCCTGTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_010933XLOC_010933Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00019446-exon-sc0000326-1491911889:272512..272672TCONS_00019446-exon-sc0000326-1491911889:272512..272672Clytia hemisphaericaexon
TCONS_00019446-exon-sc0000326-1510915933:272512..272672TCONS_00019446-exon-sc0000326-1510915933:272512..272672Clytia hemisphaericaexon
TCONS_00019446-exon-sc0000326-1575043694:272512..272672TCONS_00019446-exon-sc0000326-1575043694:272512..272672Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000326supercontigsc0000326:272512..272672 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00019446 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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