|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00019445 ID=TCONS_00019445|Name=TCONS_00019445|organism=Clytia hemisphaerica|type=transcript|length=1128bp
TGGAGTGCTGTTGGATTGCCTTCAATTTCAACTGGATTTTTTTGAGCTCA
CATCTATTGCAACTGGACTTTTCGGGTTTCTCTCAAATTCAACTTGATTG
TTTGTGGATTCCCTTCGATTTCAATTGGATTGTTCTTGGATTGCTCTCAA
TTTCAACTTGATTGTCTTCGGATTCCTATCGAACtccactggattttttt
ttatacTCATTCGATTTCAACTATATTGCATTTGGATTTCTTATCCTTCT
CAACTGGATTACATTCAAATTCATCTTGATTTGTAGCTTGCGTCTCCGGA
CAGATCAGGATTGTCAACATTGATTTTTATGATAACAAGACataagcaaa
acttaaaatttgtttttaaaacgaCGCTTGTTTTGCTACAGAATTTTGGA
ATGAAGAGATAACATTTTTGAGaagtttcaaaattatttagaaaaataag
aaatttgttTAGAAAAACATTGACCTAATTTTAGACTTGAGACAGATTTA
AATTGAAGCTTAAAGGTGACGAGAGTTCTTTAGGAGCTGCGACGATACAC
AGTCGATGATTGGAATTTCATATcattattaaaataattttgttacttGC
TACCATATCTATACTGGCAGAGTAGAATCAAAAAATCGTTTGAAACAACA
CTAGAGCGTCTACACTTGTTAGACTGAAGAACAAATTTATATCGtattga
aaatggaaattttatgatatcattcaataaaacttagcaaaaaaacttgt
agaaaaaagaacaaatcacTTTACTGGAATATAATAAAAAAGGACACAGA
TCAATAAAATGCCAGCAACATCAAAATTCAAGATCCCATATCAAGATAAT
GTCAACCGTTTATCGAGACAACCTTCTATAGGTTCCAGTCTTAAAGATAA
AACAGACTTAGAAACGAGAACTGGTATCACAGAGGAGCTAAGTATAGACT
GCCGGCCTTCATACCAAATAGTTCAAGTTGAAAGACACCATTATTCGATG
ATCAAATATACTAAAATGGTTACAAATGTTACTTTTAAATAGTTttggtt
ttgaattttaatcctctattttgtacatttttaaaTCTACTAGTTCGTTT
ATGACAAAAATTATTCTATTAAAGTTCG Run BLAST on NCBI transcript from alignment at sc0000326:271064..272191 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00019445 ID=TCONS_00019445|Name=TCONS_00019445|organism=Clytia hemisphaerica|type=transcript|length=1128bp|location=Sequence derived from alignment at sc0000326:271064..272191 (Clytia hemisphaerica)
CGAACTTTAATAGAATAATTTTTGTCATAAACGAACTAGTAGAtttaaaa
atgtacaaaatagaggattaaaattcaaaaccaaAACTATTTAAAAGTAA
CATTTGTAACCATTTTAGTATATTTGATCATCGAATAATGGTGTCTTTCA
ACTTGAACTATTTGGTATGAAGGCCGGCAGTCTATACTTAGCTCCTCTGT
GATACCAGTTCTCGTTTCTAAGTCTGTTTTATCTTTAAGACTGGAACCTA
TAGAAGGTTGTCTCGATAAACGGTTGACATTATCTTGATATGGGATCTTG
AATTTTGATGTTGCTGGCATTTTATTGATCTGTGTCCTTTTTTATTATAT
TCCAGTAAAgtgatttgttcttttttctacaagtttttttgctaagtttt
attgaatgatatcataaaatttccattttcaataCGATATAAATTTGTTC
TTCAGTCTAACAAGTGTAGACGCTCTAGTGTTGTTTCAAACGATTTTTTG
ATTCTACTCTGCCAGTATAGATATGGTAGCaagtaacaaaattattttaa
taatgATATGAAATTCCAATCATCGACTGTGTATCGTCGCAGCTCCTAAA
GAACTCTCGTCACCTTTAAGCTTCAATTTAAATCTGTCTCAAGTCTAAAA
TTAGGTCAATGTTTTTCTAaacaaatttcttatttttctaaataattttg
aaacttCTCAAAAATGTTATCTCTTCATTCCAAAATTCTGTAGCAAAACA
AGCGtcgttttaaaaacaaattttaagttttgcttatGTCTTGTTATCAT
AAAAATCAATGTTGACAATCCTGATCTGTCCGGAGACGCAAGCTACAAAT
CAAGATGAATTTGAATGTAATCCAGTTGAGAAGGATAAGAAATCCAAATG
CAATATAGTTGAAATCGAATGAgtataaaaaaaaatccagtggaGTTCGA
TAGGAATCCGAAGACAATCAAGTTGAAATTGAGAGCAATCCAAGAACAAT
CCAATTGAAATCGAAGGGAATCCACAAACAATCAAGTTGAATTTGAGAGA
AACCCGAAAAGTCCAGTTGCAATAGATGTGAGCTCAAAAAAATCCAGTTG
AAATTGAAGGCAATCCAACAGCACTCCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00019445-exon-sc0000326-1491911889:271064..272191 | TCONS_00019445-exon-sc0000326-1491911889:271064..272191 | Clytia hemisphaerica | exon |
| TCONS_00019445-exon-sc0000326-1510915933:271064..272191 | TCONS_00019445-exon-sc0000326-1510915933:271064..272191 | Clytia hemisphaerica | exon |
| TCONS_00019445-exon-sc0000326-1575043694:271064..272191 | TCONS_00019445-exon-sc0000326-1575043694:271064..272191 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000326 | supercontig | sc0000326:271064..272191 . |
Blast
The following BLAST results are available for this feature:
|
