TCONS_00019428 (transcript) - C. hemisphaerica

Overview
NameTCONS_00019428
Unique NameTCONS_00019428
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length395

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00019428 ID=TCONS_00019428|Name=TCONS_00019428|organism=Clytia hemisphaerica|type=transcript|length=395bp
cagtcattttcatttATTATGGGAACACAATTGCAATATCATTTATCCAG
ATGATACGTatattttccacatttttcaCTGTCGTAATATCATAATGATA
CACATTCGTTGGCGAAGGCAAGAATCTGGAAACCTTTGGGGAATACCTAT
GTGTCAGAGATCCGGTGGAATTTTCATCCACACTGAAGGAAAAAGCTCCA
ACGGGGCGGCATTGAGACAGTGGTGCGTGTGCGCGAGAGAATGAAAAGAA
CGcccagaaagaaaagaaagaccaaCGAAGTTATAGTCTCTATTCTATTA
TAACTTGATTGTAATGATTCGTGacctcatttttaattttcgccactttt
tttaatgttttatgtaTTTCGTAACGTATATTATTTTATGAATTG
Run BLAST on NCBI

transcript from alignment at sc0000326:33652..34046

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00019428 ID=TCONS_00019428|Name=TCONS_00019428|organism=Clytia hemisphaerica|type=transcript|length=395bp|location=Sequence derived from alignment at sc0000326:33652..34046 (Clytia hemisphaerica)
CAATTCATAAAATAATATACGTTACGAAAtacataaaacattaaaaaaag
tggcgaaaattaaaaatgaggtCACGAATCATTACAATCAAGTTATAATA
GAATAGAGACTATAACTTCGttggtctttcttttctttctgggCGTTCTT
TTCATTCTCTCGCGCACACGCACCACTGTCTCAATGCCGCCCCGTTGGAG
CTTTTTCCTTCAGTGTGGATGAAAATTCCACCGGATCTCTGACACATAGG
TATTCCCCAAAGGTTTCCAGATTCTTGCCTTCGCCAACGAATGTGTATCA
TTATGATATTACGACAGtgaaaaatgtggaaaatatACGTATCATCTGGA
TAAATGATATTGCAATTGTGTTCCCATAATaaatgaaaatgactg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_010915XLOC_010915Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00019428-exon-sc0000326-1491911889:33652..34046TCONS_00019428-exon-sc0000326-1491911889:33652..34046Clytia hemisphaericaexon
TCONS_00019428-exon-sc0000326-1510915933:33652..34046TCONS_00019428-exon-sc0000326-1510915933:33652..34046Clytia hemisphaericaexon
TCONS_00019428-exon-sc0000326-1575043694:33652..34046TCONS_00019428-exon-sc0000326-1575043694:33652..34046Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000326supercontigsc0000326:33652..34046 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.240801	0	0.368076	0.37669	4.18012	3.20327	4.51805	3.10016	1.71618	0.565119	1.15947	0.198289	0.14266	1.41861	1.01148	0.235838	0	0	0.215591	0	0.315636	0	0	0	0.279244	0.846659	0	0.564993	0	0.132151
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00019428 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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