TCONS_00019257 (transcript) - C. hemisphaerica

Overview
NameTCONS_00019257
Unique NameTCONS_00019257
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1106

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00019257 ID=TCONS_00019257|Name=TCONS_00019257|organism=Clytia hemisphaerica|type=transcript|length=1106bp
agtCTCAAACGATGGTCGAATGAGAAGAAAACATTCATTTCACAAAGACT
GGAAAGAAGGAAGAATGAgaTCTCGTGACGCATTAAGAAATCATCAAGAG
ATTTTTAGAAgagaagaagaaaatggagAAGTTGGAGATTCAGTTTTTGT
TAAGAGATcttCTCAACCAACAGAGCTATccGGACTTCAATCGGTATCTG
TACAAGGCCACAACGCTGCTCGAGACCGTCACCAGGGCACAGGCGCCGTC
ACTTACGATTCGGTTCTTGAGGACCATGCCATCGCCTATGCTATGAAGCT
AGCAAGAGAAAACAAGTTTGATCATGacaaaaatgaattgaaaatgtATT
CAGAAGGAGAAAATTTGTATCAAGGCTTCTTAGATGATCCAAAAGAAGGA
ATTTGTGTTGCTATGTACAAATGGTACAATGAACTTCGTCTTTTTAACTA
TGGGAAATTAACAGGTGCTTACAATTTCTTGCCAGCTCCTGAAATCGGAC
ATTTCACTCAGATGGTGTGGAAATCATCCACTCGCATTGGATGTGGTGGT
GCTTACGTCCAGACAAACGACTCACGTGGAAAGTTCATCGTAACCGTTGT
CTGTCGGTACAAGAAACAAGGAAATGTGTTTGGCAAGTTCCCCGATAATG
TTGGCGATCTGAAATCTGGAAAATCCAAAAATGGGTTTACAAGTCGTGAT
GAAGTGTGTGGTGGATGTGTGGATAGCCGCTCCGATTGCGCCGCTAAAAG
TGGCCATTGCAGAAGTCCGTTCTTCCCTGGGATTGCAGCTGGATGTCCAA
AAACATGCGGCAAATGTTGATTACTTTCAGATACAATAGAGGGGTATTGC
TGCGTTTGGATAAAAATTTCCGCTTACTAGTGCACAAGCGTTTAAACAAC
ATCCATGACGTTAATATAACGTTTTATGAATGTTGGACCAACCTTGCATA
TGCTAGTCTAAGCtcgaaaatgagaaataaaattttaaagtcatTCCTCC
TCTGGAAGAGTTATCTCGTATTTCAAATaatattgtaacgtaaaatgtAA
CTTATGTAATTAATGTAGTATATGTATGTAATGATAATATAATatcaaaa
tgaaat
Run BLAST on NCBI

protein sequence of TCONS_00019257-protein

>TCONS_00019257-protein ID=TCONS_00019257-protein|Name=TCONS_00019257-protein|organism=Clytia hemisphaerica|type=polypeptide|length=272bp
VSNDGRMRRKHSFHKDWKEGRMRSRDALRNHQEIFRREEENGEVGDSVFV
KRSSQPTELSGLQSVSVQGHNAARDRHQGTGAVTYDSVLEDHAIAYAMKL
ARENKFDHDKNELKMYSEGENLYQGFLDDPKEGICVAMYKWYNELRLFNY
GKLTGAYNFLPAPEIGHFTQMVWKSSTRIGCGGAYVQTNDSRGKFIVTVV
CRYKKQGNVFGKFPDNVGDLKSGKSKNGFTSRDEVCGGCVDSRSDCAAKS
GHCRSPFFPGIAAGCPKTCGKC
Run BLAST on NCBI

transcript from alignment at sc0000323:6605..13602+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00019257 ID=TCONS_00019257|Name=TCONS_00019257|organism=Clytia hemisphaerica|type=transcript|length=6998bp|location=Sequence derived from alignment at sc0000323:6605..13602+ (Clytia hemisphaerica)
agtCTCAAACGATGGTCGAATGAGAAGAAAACATTCATTTCACAAAGACT GGAAAGAAGGAAGAATGAGTAAGTCATGGAGAAACCAGGTTAGAGGGAAT AAGCTCTCAAACACTTGACCTGGTTTCTTTATCACAAATCAAATGCTGTA AAAAATGGGGTGCTTAAGGGTATGATGCATATATGAAAATTGAAATCTTG AGTATTTGAGTCTTTCttgctttttttcttcatttctacaTTAATTGGTT TGGAATTCAGTCATTCTAAAGGTTAAGGGCCTATCTTAAACCGCTCTTAT TTCAAGGCATTTtcgagcctcattgttcttgtaaaatgatggacaaaatc attattgattgtcttttttctttcttttaggaTCTCGTGACGCATTAAGA AATCATCAAGAGATTTTTAGAAGTAAGAAACGTAGAGTTTTCTCaaacta attcagacatagtagagaGTAGCAAAATTAATGGAGGGGCAGATATCCTC CCATAACGATTATCTTATTATCATAAAACACCCATATTACTTTATTACAC GGATCATAAGCTTTGTTTATCCTGTTGTCGGCTTAAAATGCTAGGGAGTG GAATTAAGGACAGCTAGGACTTCAAGAAAGCGTTAATTAAATTGGCAGAG CATAGGCGTAACGAGATACCCTGctaaatttatggatgagagcggttttt acgacactgtaataactgtctttgttttatcaaaagatgatGAATaagtc ataaacgtctgcactctctcataaattttgcagggtatctcgctacgcct atgcagAGGACAACAATAGGGCTTTGTGGATTCGATCAGTGATGACAAAa taattgattaatttttttgtggTATTTTaggagaagaagaaaatggagAA GTTGGAGATTCAGTTTTTGTTAAGAGATGTAAGTATTCTAATTAAAggct ttatttttacataaaatgtGTTCCCGTTTATTTTATATCAGGaaagtgtc tgcctattgttatattatgctgatataagcaattaattgtttttcttttt ctctttctgaccaatctctCTTCACATCCGTGTCGatcaaatgtgaaaaa gttgGTAAATGATGagtacaaaaaaacaaaacttttaatagCGTACCGCA GCTGATCTAAAGATAGCAACAAATTTGCACAAATTTATTCATTTGTACGA CTTGCAATATCAAAGGAAAGGTAATAACGTTGTTCCAATCATTTCGAAAA GAACTTTGAGCTAAAAATGAATATGACCttgggtaacttaatgcatgtcc caaaaatgcattaatttttccgccccagttccagtccctaaaccataaca aactatacatttttgaaagcgtatttggatgtagaaNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNgaaaaaaaaaaaaaaaaaaaaa aaaaaaaaaaaaaaaaaaaaaaaataaaataaaaaaaaataaataaataa ataaaataaaaaattaaaaaattaaaaaaattaaaaaaaaattaaaaaaa ttaaaaaaaaacaaaaacaaatcaagTGTACACTTTTTAGACCGTAGCCG CCAGTTAccgtgcgggcatttttttcCGTTCTTCTACCCTAAAAAACGTC CAAGTCTTTTTTTCACACCTAAAGACCATAGAAAAAGGTGCACAAAAGGA TTGAaacgagtttagggggataattaaataataaagtggcacacgCCTGA CCACGCAACTACGGCTGAAAAGGTGTTTTGGATAGTGCGTTCAAATGGCC TGGTAGTATATGGTAGCTCTACCCGTATAGTTCTCAATTTTGTTGACCTC ACTTAGATGGATTATAAAACAGTCCACCAAAATAACAGTGCGagcagttt ttttttctttatttagaatttttgtcattCTCTTCTTTCAAATTGCGTCC TCATCAAATGCTTTTAGTATACTTCACTgtactcagcgtcatcaaaattt ttcaaaaaagcaaatttCAGCCAGAATTAGCATGCTCTTGTCTACGGTTA TCATAAAATTTGTTTAACCAACATGATTTCATTTACCtagtttcaaaaat taaatatttgaaaaactcTAGAGCAGCAAATAAAAAGTTTCAGGGACATT GGAAccattaaaacaaaagaataaattCTTTATAACCAATACACTGTCTT TTTCCCGTTCTTTGAACAGTCTTATCACaccttgttttctttctttttca gcttCTCAACCAACAGAGCTATGTAAGCATTTTCTACAAAATATTGTTAC GAGCCTGGAGGTACTATCTTTACCGACCGACGGAGGTGTGCCGCtgagat ttgaaaaataaaccctacctgggactggaaacttttccaaaaatgcgaaa aaagtgatcctaaatgggactgaaattccaaaattttcccaaatttccCC ACGatggactgatttttctattttggtgtttttgtgcggctacctgggac tcatggaggtgaaaaaaggtaccctgactaGCGGCAAATCCCCTTTCCTT TTGCCCAAGTCCCCCCGCCCGGGGCTACAAGCTGATGTTAAAGTTCCTTT TAATCTGCGAAATGATTGACACAGCGAACAGTTTTTACAACGAgtcataa aatcaaaataaataaacggtAAGAATTCAATGGTTTGTAGTTAAAACCCA GACTTGATCATTCAATTCATAGATTCTCACATATAGCAAATAACATCATG CTCAAAATtcgactgaaattttttttagccGGACTTCAATCGGTATCTGT ACAAGGCCACAACGCTGCTCGAGACCGTCACCAGGGCACAGGCGCCGTCA CTTACGATTCGGTTCTTGAGGACCATGCCATCGCCTATGCTATGAAGCTA GCAAGAGAAAACAAGTTTGATCATGacaaaaatgaattgaaaatgtATTC AGAAGGAGAAAATTTGTATCAAGGCTTCTTAGATGATCCAAAAGAAGGAA TTTGTGTTGCTATGTACAAATGGTACAGTTCATGTattctttttactttt aaaaacattgcaATCTTTGGTTTATCAAAATCTTTaatcttttgaatatt tttcttcaacaatacctttccaacggtgtatttAACTTCTTAACATCATT AATGGGTGCTTAGAAATTATACTTAGAAATGTTCAAAATGTCAATTTAGC TTGAACTTTGGTATTAGCTTTATGAATATCCAGTCTGCTTGGAAAaacct ttcagaaaatttctCAACGTTTTGTCTGGAAATTCTATTGATGTTCCTTC CATTAATTTTAGGTACAATGAACTTCGTCTTTTTAACTATGGGAAATTAA CAGGTGCTTACAATTTCTTGCCAGCTCCTGAAATCGGACATTTCACTCAG GTAAAATCAATTACAATTTTCAGACTTGCATTCCTAATTTTGAACTCGTG AACATAATTCTCTAGTAGTTATCGAAAATGACCAACAAAATATGGAGGTT TCCCTTCAAGTCCAAGTGTTAGCTTTAGTACAGTAAAAAAACTCTGGAAA AAGGTACAAATGGAAAATAGTTCCAAATTCTCTTTAAGGGTTACAAAAGC AGAAAAGTCTctttaatataacaatagcgttcagtttgaggtcgttgttg ttattttctgcccgcgtagTTTGATTATCCACCCGATAGTGTCATTATGG CACcagagggctaataatcaaattgcaagggcagaattaatgacaaaaac gaacgaaaacttaacgctattactatcaTTGTCCATATCGGACATTCAAT CAACGTTTTTACTAGCGTCAGCCAAGTTTTTTCGCTTCAATGCTATCTCT TCAACAAGTTTTTAGCACCTGGCgagcaaatgaccaaaaagtgttttttt ctgacgttagtttagtctcttcgcttcaatgcaacgacttcaatccaaTT CCGGCCGGGCTGCAAATGACATTATTGCCCTATAACCTGGGCgtttaatg atatttcagctcTCTGAAGCCTGGCACTTTAGTttcctcagcgcgggtat gacaatttgagtcacaaaacctttcaataccgcccgccgattGAACCTTT AATGACTTACTTAATGTCCGCTATATGGATAATAATGGTCGCTTGTCGAA GGACCGTTGTGCATATCTGACGCTCTCTTAATCTAGTCCACCGGTGTAAA CAATGCAGACGTGGTAGGGGGGGGGTAGTTGAGGTTTAGCGTGCTTGTCT CCTGACCGAAAGGGTGTGGGCTCGAATCACATACAAATCGACCTATTAAG TAAGGTCATCTCTTGCATCGCTAATCGCCCCAATGATGGTGCAGGTCACG AGACGCACCAACACTGAGTTGAGTTCGGACCCTAAACATAAATCGCTACT AAACCAGACGGCACACAATGTCAAAACAAcgtccatgtgacattcataac gtccaaataacgttacttgaacgttaaaacaacgttgagTGCCAGCTGCT AAATggcaaaactaaaaaaatctaACCTTGAGGTtaatatttatttgttt tagATGGTGTGGAAATCATCCACTCGCATTGGATGTGGTGGTGCTTACGT CCAGACAAACGACTCACGTGGAAAGTTCATCGTAACCGTTGTCTGTCGGT ACAAGAAACAAGGAAATGTGTTTGGCAAGTTCCCCGATAATGTTGGCGAT CTGAAATCTGGAAAATCCAAAAATGGGTTTACAAGTCGTGATGAAGTGTG TGGTGGATGTGTGGATAGCCGCTCCGATTGCGCCGCTAAAAGTGGCCATT GCAGAAGTCCGTTCTTCCCTGGGATTGCAGCTGGATGTCCAAAAACATGC GGCAAATGTTGATTACTTTCAGATACAATAGAGGGGTATTGCTGCGTTTG GATAAAAATTTCCGCTTACTAGTGCACAAGCGTTTAAACAACATCCATGA CGTTAATATAACGTTTTATGAATGTTGGACCAACCTTGCATATGCTAGTC TAAGCtcgaaaatgagaaataaaattttaaagtcatTCCTCCTCTGGAAG AGTTATCTCGTATTTCAAATaatattgtaacgtaaaatgtAACTTATGTA ATTAATGTAGTATATGTATGTAATGATAATATAATatcaaaatgaaat

Coding sequence (CDS) from alignment at sc0000323:6605..13602+

>TCONS_00019257 ID=TCONS_00019257|Name=TCONS_00019257|organism=Clytia hemisphaerica|type=CDS|length=5733bp|location=Sequence derived from alignment at sc0000323:6605..13602+ (Clytia hemisphaerica)
gtCTCAAACGATGGTCGAATGAGAAGAAAACATTCATTTCACAAAGACTG
GAAAGAAGGAAGAATGAgaTCTCGTGACGCATTAAGAAATCATCAAGAGA
TTTTTAGAAgagaagaagaaaatggagAAGTTGGAGATTCAGTTTTTGTT
AAGAGATcttCTCAACCAACAGAGCTATccGGACTTCAATCGGTATCTGT
ACAAGGCCACAACGCTGCTCGAGACCGTCACCAGGGCACAGGCGCCGTCA
CTTACGATTCGGTTCTTGAGGACCATGCCATCGCCTATGCTATGAAGCTA
GCAAGAGAAAACAAGTTTGATCATGacaaaaatgaattgaaaatgtATTC
AGAAGGAGAAAATTTGTATCAAGGCTTCTTAGATGATCCAAAAGAAGGAA
TTTGTGTTGCTATGTACAAATGGTACAATGAACTTCGTCTTTTTAACTAT
GGGAAATTAACAGGTGCTTACAATTTCTTGCCAGCTCCTGAAATCGGACA
TTTCACTCAGATGGTGTGGAAATCATCCACTCGCATTGGATGTGGTGGTG
CTTACGTCCAGACAAACGACTCACGTGGAAAGTTCATCGTAACCGTTGTC
TGTCGGTACAAGAAACAAGGAAATGTGTTTGGCAAGTTCCCCGATAATGT
TGGCGATCTGAAATCTGGAAAATCCAAAAATGGGTTTACAAGTCGTGATG
AAGTGTGTGGTGGATGTGTGGATAGCCGCTCCGATTGCGCCGCTAAAAGT
GGCCATTGCAGAAGTCCGTTCTTCCCTGGGATTGCAGCTGGATGTCCAAA
AACATGCGGCAAATGTTGAgtCTCAAACGATGGTCGAATGAGAAGAAAAC
ATTCATTTCACAAAGACTGGAAAGAAGGAAGAATGAgaTCTCGTGACGCA
TTAAGAAATCATCAAGAGATTTTTAGAAgagaagaagaaaatggagAAGT
TGGAGATTCAGTTTTTGTTAAGAGATcttCTCAACCAACAGAGCTATccG
GACTTCAATCGGTATCTGTACAAGGCCACAACGCTGCTCGAGACCGTCAC
CAGGGCACAGGCGCCGTCACTTACGATTCGGTTCTTGAGGACCATGCCAT
CGCCTATGCTATGAAGCTAGCAAGAGAAAACAAGTTTGATCATGacaaaa
atgaattgaaaatgtATTCAGAAGGAGAAAATTTGTATCAAGGCTTCTTA
GATGATCCAAAAGAAGGAATTTGTGTTGCTATGTACAAATGGTACAATGA
ACTTCGTCTTTTTAACTATGGGAAATTAACAGGTGCTTACAATTTCTTGC
CAGCTCCTGAAATCGGACATTTCACTCAGATGGTGTGGAAATCATCCACT
CGCATTGGATGTGGTGGTGCTTACGTCCAGACAAACGACTCACGTGGAAA
GTTCATCGTAACCGTTGTCTGTCGGTACAAGAAACAAGGAAATGTGTTTG
GCAAGTTCCCCGATAATGTTGGCGATCTGAAATCTGGAAAATCCAAAAAT
GGGTTTACAAGTCGTGATGAAGTGTGTGGTGGATGTGTGGATAGCCGCTC
CGATTGCGCCGCTAAAAGTGGCCATTGCAGAAGTCCGTTCTTCCCTGGGA
TTGCAGCTGGATGTCCAAAAACATGCGGCAAATGTTGAgtCTCAAACGAT
GGTCGAATGAGAAGAAAACATTCATTTCACAAAGACTGGAAAGAAGGAAG
AATGAgaTCTCGTGACGCATTAAGAAATCATCAAGAGATTTTTAGAAgag
aagaagaaaatggagAAGTTGGAGATTCAGTTTTTGTTAAGAGATcttCT
CAACCAACAGAGCTATccGGACTTCAATCGGTATCTGTACAAGGCCACAA
CGCTGCTCGAGACCGTCACCAGGGCACAGGCGCCGTCACTTACGATTCGG
TTCTTGAGGACCATGCCATCGCCTATGCTATGAAGCTAGCAAGAGAAAAC
AAGTTTGATCATGacaaaaatgaattgaaaatgtATTCAGAAGGAGAAAA
TTTGTATCAAGGCTTCTTAGATGATCCAAAAGAAGGAATTTGTGTTGCTA
TGTACAAATGGTACAATGAACTTCGTCTTTTTAACTATGGGAAATTAACA
GGTGCTTACAATTTCTTGCCAGCTCCTGAAATCGGACATTTCACTCAGAT
GGTGTGGAAATCATCCACTCGCATTGGATGTGGTGGTGCTTACGTCCAGA
CAAACGACTCACGTGGAAAGTTCATCGTAACCGTTGTCTGTCGGTACAAG
AAACAAGGAAATGTGTTTGGCAAGTTCCCCGATAATGTTGGCGATCTGAA
ATCTGGAAAATCCAAAAATGGGTTTACAAGTCGTGATGAAGTGTGTGGTG
GATGTGTGGATAGCCGCTCCGATTGCGCCGCTAAAAGTGGCCATTGCAGA
AGTCCGTTCTTCCCTGGGATTGCAGCTGGATGTCCAAAAACATGCGGCAA
ATGTTGAgtCTCAAACGATGGTCGAATGAGAAGAAAACATTCATTTCACA
AAGACTGGAAAGAAGGAAGAATGAgaTCTCGTGACGCATTAAGAAATCAT
CAAGAGATTTTTAGAAgagaagaagaaaatggagAAGTTGGAGATTCAGT
TTTTGTTAAGAGATcttCTCAACCAACAGAGCTATccGGACTTCAATCGG
TATCTGTACAAGGCCACAACGCTGCTCGAGACCGTCACCAGGGCACAGGC
GCCGTCACTTACGATTCGGTTCTTGAGGACCATGCCATCGCCTATGCTAT
GAAGCTAGCAAGAGAAAACAAGTTTGATCATGacaaaaatgaattgaaaa
tgtATTCAGAAGGAGAAAATTTGTATCAAGGCTTCTTAGATGATCCAAAA
GAAGGAATTTGTGTTGCTATGTACAAATGGTACAATGAACTTCGTCTTTT
TAACTATGGGAAATTAACAGGTGCTTACAATTTCTTGCCAGCTCCTGAAA
TCGGACATTTCACTCAGATGGTGTGGAAATCATCCACTCGCATTGGATGT
GGTGGTGCTTACGTCCAGACAAACGACTCACGTGGAAAGTTCATCGTAAC
CGTTGTCTGTCGGTACAAGAAACAAGGAAATGTGTTTGGCAAGTTCCCCG
ATAATGTTGGCGATCTGAAATCTGGAAAATCCAAAAATGGGTTTACAAGT
CGTGATGAAGTGTGTGGTGGATGTGTGGATAGCCGCTCCGATTGCGCCGC
TAAAAGTGGCCATTGCAGAAGTCCGTTCTTCCCTGGGATTGCAGCTGGAT
GTCCAAAAACATGCGGCAAATGTTGAgtCTCAAACGATGGTCGAATGAGA
AGAAAACATTCATTTCACAAAGACTGGAAAGAAGGAAGAATGAgaTCTCG
TGACGCATTAAGAAATCATCAAGAGATTTTTAGAAgagaagaagaaaatg
gagAAGTTGGAGATTCAGTTTTTGTTAAGAGATcttCTCAACCAACAGAG
CTATccGGACTTCAATCGGTATCTGTACAAGGCCACAACGCTGCTCGAGA
CCGTCACCAGGGCACAGGCGCCGTCACTTACGATTCGGTTCTTGAGGACC
ATGCCATCGCCTATGCTATGAAGCTAGCAAGAGAAAACAAGTTTGATCAT
GacaaaaatgaattgaaaatgtATTCAGAAGGAGAAAATTTGTATCAAGG
CTTCTTAGATGATCCAAAAGAAGGAATTTGTGTTGCTATGTACAAATGGT
ACAATGAACTTCGTCTTTTTAACTATGGGAAATTAACAGGTGCTTACAAT
TTCTTGCCAGCTCCTGAAATCGGACATTTCACTCAGATGGTGTGGAAATC
ATCCACTCGCATTGGATGTGGTGGTGCTTACGTCCAGACAAACGACTCAC
GTGGAAAGTTCATCGTAACCGTTGTCTGTCGGTACAAGAAACAAGGAAAT
GTGTTTGGCAAGTTCCCCGATAATGTTGGCGATCTGAAATCTGGAAAATC
CAAAAATGGGTTTACAAGTCGTGATGAAGTGTGTGGTGGATGTGTGGATA
GCCGCTCCGATTGCGCCGCTAAAAGTGGCCATTGCAGAAGTCCGTTCTTC
CCTGGGATTGCAGCTGGATGTCCAAAAACATGCGGCAAATGTTGAgtCTC
AAACGATGGTCGAATGAGAAGAAAACATTCATTTCACAAAGACTGGAAAG
AAGGAAGAATGAgaTCTCGTGACGCATTAAGAAATCATCAAGAGATTTTT
AGAAgagaagaagaaaatggagAAGTTGGAGATTCAGTTTTTGTTAAGAG
ATcttCTCAACCAACAGAGCTATccGGACTTCAATCGGTATCTGTACAAG
GCCACAACGCTGCTCGAGACCGTCACCAGGGCACAGGCGCCGTCACTTAC
GATTCGGTTCTTGAGGACCATGCCATCGCCTATGCTATGAAGCTAGCAAG
AGAAAACAAGTTTGATCATGacaaaaatgaattgaaaatgtATTCAGAAG
GAGAAAATTTGTATCAAGGCTTCTTAGATGATCCAAAAGAAGGAATTTGT
GTTGCTATGTACAAATGGTACAATGAACTTCGTCTTTTTAACTATGGGAA
ATTAACAGGTGCTTACAATTTCTTGCCAGCTCCTGAAATCGGACATTTCA
CTCAGATGGTGTGGAAATCATCCACTCGCATTGGATGTGGTGGTGCTTAC
GTCCAGACAAACGACTCACGTGGAAAGTTCATCGTAACCGTTGTCTGTCG
GTACAAGAAACAAGGAAATGTGTTTGGCAAGTTCCCCGATAATGTTGGCG
ATCTGAAATCTGGAAAATCCAAAAATGGGTTTACAAGTCGTGATGAAGTG
TGTGGTGGATGTGTGGATAGCCGCTCCGATTGCGCCGCTAAAAGTGGCCA
TTGCAGAAGTCCGTTCTTCCCTGGGATTGCAGCTGGATGTCCAAAAACAT
GCGGCAAATGTTGAgtCTCAAACGATGGTCGAATGAGAAGAAAACATTCA
TTTCACAAAGACTGGAAAGAAGGAAGAATGAgaTCTCGTGACGCATTAAG
AAATCATCAAGAGATTTTTAGAAgagaagaagaaaatggagAAGTTGGAG
ATTCAGTTTTTGTTAAGAGATcttCTCAACCAACAGAGCTATccGGACTT
CAATCGGTATCTGTACAAGGCCACAACGCTGCTCGAGACCGTCACCAGGG
CACAGGCGCCGTCACTTACGATTCGGTTCTTGAGGACCATGCCATCGCCT
ATGCTATGAAGCTAGCAAGAGAAAACAAGTTTGATCATGacaaaaatgaa
ttgaaaatgtATTCAGAAGGAGAAAATTTGTATCAAGGCTTCTTAGATGA
TCCAAAAGAAGGAATTTGTGTTGCTATGTACAAATGGTACAATGAACTTC
GTCTTTTTAACTATGGGAAATTAACAGGTGCTTACAATTTCTTGCCAGCT
CCTGAAATCGGACATTTCACTCAGATGGTGTGGAAATCATCCACTCGCAT
TGGATGTGGTGGTGCTTACGTCCAGACAAACGACTCACGTGGAAAGTTCA
TCGTAACCGTTGTCTGTCGGTACAAGAAACAAGGAAATGTGTTTGGCAAG
TTCCCCGATAATGTTGGCGATCTGAAATCTGGAAAATCCAAAAATGGGTT
TACAAGTCGTGATGAAGTGTGTGGTGGATGTGTGGATAGCCGCTCCGATT
GCGCCGCTAAAAGTGGCCATTGCAGAAGTCCGTTCTTCCCTGGGATTGCA
GCTGGATGTCCAAAAACATGCGGCAAATGTTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_010810XLOC_010810Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00019257-proteinTCONS_00019257-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00019257-exon-sc0000323-1491911889:6605..6672TCONS_00019257-exon-sc0000323-1491911889:6605..6672Clytia hemisphaericaexon
TCONS_00019257-exon-sc0000323-1510915933:6605..6672TCONS_00019257-exon-sc0000323-1510915933:6605..6672Clytia hemisphaericaexon
TCONS_00019257-exon-sc0000323-1575043694:6605..6672TCONS_00019257-exon-sc0000323-1575043694:6605..6672Clytia hemisphaericaexon
TCONS_00019257-exon-sc0000323-1491911889:6985..7026TCONS_00019257-exon-sc0000323-1491911889:6985..7026Clytia hemisphaericaexon
TCONS_00019257-exon-sc0000323-1510915933:6985..7026TCONS_00019257-exon-sc0000323-1510915933:6985..7026Clytia hemisphaericaexon
TCONS_00019257-exon-sc0000323-1575043694:6985..7026TCONS_00019257-exon-sc0000323-1575043694:6985..7026Clytia hemisphaericaexon
TCONS_00019257-exon-sc0000323-1491911889:7485..7532TCONS_00019257-exon-sc0000323-1491911889:7485..7532Clytia hemisphaericaexon
TCONS_00019257-exon-sc0000323-1510915933:7485..7532TCONS_00019257-exon-sc0000323-1510915933:7485..7532Clytia hemisphaericaexon
TCONS_00019257-exon-sc0000323-1575043694:7485..7532TCONS_00019257-exon-sc0000323-1575043694:7485..7532Clytia hemisphaericaexon
TCONS_00019257-exon-sc0000323-1491911889:10706..10726TCONS_00019257-exon-sc0000323-1491911889:10706..10726Clytia hemisphaericaexon
TCONS_00019257-exon-sc0000323-1510915933:10706..10726TCONS_00019257-exon-sc0000323-1510915933:10706..10726Clytia hemisphaericaexon
TCONS_00019257-exon-sc0000323-1575043694:10706..10726TCONS_00019257-exon-sc0000323-1575043694:10706..10726Clytia hemisphaericaexon
TCONS_00019257-exon-sc0000323-1491911889:11233..11476TCONS_00019257-exon-sc0000323-1491911889:11233..11476Clytia hemisphaericaexon
TCONS_00019257-exon-sc0000323-1510915933:11233..11476TCONS_00019257-exon-sc0000323-1510915933:11233..11476Clytia hemisphaericaexon
TCONS_00019257-exon-sc0000323-1575043694:11233..11476TCONS_00019257-exon-sc0000323-1575043694:11233..11476Clytia hemisphaericaexon
TCONS_00019257-exon-sc0000323-1491911889:11767..11854TCONS_00019257-exon-sc0000323-1491911889:11767..11854Clytia hemisphaericaexon
TCONS_00019257-exon-sc0000323-1510915933:11767..11854TCONS_00019257-exon-sc0000323-1510915933:11767..11854Clytia hemisphaericaexon
TCONS_00019257-exon-sc0000323-1575043694:11767..11854TCONS_00019257-exon-sc0000323-1575043694:11767..11854Clytia hemisphaericaexon
TCONS_00019257-exon-sc0000323-1491911889:13008..13602TCONS_00019257-exon-sc0000323-1491911889:13008..13602Clytia hemisphaericaexon
TCONS_00019257-exon-sc0000323-1510915933:13008..13602TCONS_00019257-exon-sc0000323-1510915933:13008..13602Clytia hemisphaericaexon
TCONS_00019257-exon-sc0000323-1575043694:13008..13602TCONS_00019257-exon-sc0000323-1575043694:13008..13602Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000323supercontigsc0000323:6605..13602 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.830583 0.578535 1.61216 0.832437 1.12009 0.758664 1.62719 1.28533 1.06654 0.784391 1.08192 0.974621 1.28892 1.77564 1.48227 1.68711 24.8218 35.1496 1.51359 1.09991 117.093 110.74 37.685 62.7915 47.0509 84.9691 1.19313 0.810305 0.921882 1.65487
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001283Allrgn_V5/Tpx1
IPR003582ShKT_dom
IPR014044CAP_domain
IPR018244Allrgn_V5/Tpx1_CS
Vocabulary: Cellular Component
TermDefinition
GO:0005576extracellular region
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005576 extracellular region
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00019257 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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