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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00019256 ID=TCONS_00019256|Name=TCONS_00019256|organism=Clytia hemisphaerica|type=transcript|length=942bp
GGATGTTCTCTCCATTTTCTTCCTGAATTATAAAAATTCTTATGAATATT
CTACAAtcttttctaataaaaaaatatacagtCTTAAGGCATCAGCTACA
TTTTCAGATGGCACGTCGAAATTAGTTCCAGCCAAAACTTCTGTGGCAAA
TTCTTCAAATTCTGGAGAAACATCTACTGGTGAGGGCTTGAGACACATAT
ACAAATCAGCTAGTTCAATTGGATCTACTTCAGAGCAATAATTTTCACTA
TCAAATAAGTGTGGTAGATTGAACATAGTATTTGGTCTTCCTCGTGGCCC
AGTGTTATTATTACTTGCAGCTATTAAATGTACATTCCagtcatttttaa
ttgagtttAAGTCGCTCCTTATCAAGGGAAGAAAACAAAATCTATATGCC
AAACATAACCAGGGCCTCTAGATCTATACTTTCGACGTCTTAAACGATGC
TTTCTTCTTATGTTAACACCGACAGGATCTAGTTCCAATAAGAATCTTCT
CACGTCTTCTCTCCGGCACATTAGACCTTTGGTTAGCAATATACGATGCA
TTCGTCTGTATCCAAGGTTTCCACTACTACCTTCGAGCTCTTCTGATATT
GCTTGCTTTAGAACCAAATCTTCATCACGTCTATTTTGCAATGGTCTTTT
GTATAAACGATTTGAtctaaaaaatcttttcaatgttGACATGCTCGTTT
TTACTCTATCTTTAACCCTCAACATTTCAATTATTTCAGCATATGTATAA
CCATCATTGAAATAACCAACGACGACATcctttttttcattcagtaatGC
AGCCATGATATATCAGCAAAGCAAAACTGTCGCCTCGAAATATTAATATA
AACTGATCAGCATCAACATATACCACATCCTCAACGaaactgaacgaaaa
aaaaaacagtttctttttttgtttaaagcGAAAGGAAATTTA Run BLAST on NCBI protein sequence of TCONS_00019256-protein >TCONS_00019256-protein ID=TCONS_00019256-protein|Name=TCONS_00019256-protein|organism=Clytia hemisphaerica|type=polypeptide|length=144bp
MAALLNEKKDVVVGYFNDGYTYAEIIEMLRVKDRVKTSMSTLKRFFRSNR
LYKRPLQNRRDEDLVLKQAISEELEGSSGNLGYRRMHRILLTKGLMCRRE
DVRRFLLELDPVGVNIRRKHRLRRRKYRSRGPGYVWHIDFVFFP Run BLAST on NCBI transcript from alignment at sc0000321:250507..251448 Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00019256 ID=TCONS_00019256|Name=TCONS_00019256|organism=Clytia hemisphaerica|type=transcript|length=942bp|location=Sequence derived from alignment at sc0000321:250507..251448 (Clytia hemisphaerica)
TAAATTTCCTTTCgctttaaacaaaaaaagaaactgttttttttttcgtt
cagtttCGTTGAGGATGTGGTATATGTTGATGCTGATCAGTTTATATTAA
TATTTCGAGGCGACAGTTTTGCTTTGCTGATATATCATGGCTGCattact
gaatgaaaaaaaggATGTCGTCGTTGGTTATTTCAATGATGGTTATACAT
ATGCTGAAATAATTGAAATGTTGAGGGTTAAAGATAGAGTAAAAACGAGC
ATGTCaacattgaaaagattttttagaTCAAATCGTTTATACAAAAGACC
ATTGCAAAATAGACGTGATGAAGATTTGGTTCTAAAGCAAGCAATATCAG
AAGAGCTCGAAGGTAGTAGTGGAAACCTTGGATACAGACGAATGCATCGT
ATATTGCTAACCAAAGGTCTAATGTGCCGGAGAGAAGACGTGAGAAGATT
CTTATTGGAACTAGATCCTGTCGGTGTTAACATAAGAAGAAAGCATCGTT
TAAGACGTCGAAAGTATAGATCTAGAGGCCCTGGTTATGTTTGGCATATA
GATTTTGTTTTCTTCCCTTGATAAGGAGCGACTTaaactcaattaaaaat
gactGGAATGTACATTTAATAGCTGCAAGTAATAATAACACTGGGCCACG
AGGAAGACCAAATACTATGTTCAATCTACCACACTTATTTGATAGTGAAA
ATTATTGCTCTGAAGTAGATCCAATTGAACTAGCTGATTTGTATATGTGT
CTCAAGCCCTCACCAGTAGATGTTTCTCCAGAATTTGAAGAATTTGCCAC
AGAAGTTTTGGCTGGAACTAATTTCGACGTGCCATCTGAAAATGTAGCTG
ATGCCTTAAGactgtatatttttttattagaaaagaTTGTAGAATATTCA
TAAGAATTTTTATAATTCAGGAAGAAAATGGAGAGAACATCC Coding sequence (CDS) from alignment at sc0000321:250507..251448 >TCONS_00019256 ID=TCONS_00019256|Name=TCONS_00019256|organism=Clytia hemisphaerica|type=CDS|length=435bp|location=Sequence derived from alignment at sc0000321:250507..251448 (Clytia hemisphaerica)
ATGGCTGCattactgaatgaaaaaaaggATGTCGTCGTTGGTTATTTCAA
TGATGGTTATACATATGCTGAAATAATTGAAATGTTGAGGGTTAAAGATA
GAGTAAAAACGAGCATGTCaacattgaaaagattttttagaTCAAATCGT
TTATACAAAAGACCATTGCAAAATAGACGTGATGAAGATTTGGTTCTAAA
GCAAGCAATATCAGAAGAGCTCGAAGGTAGTAGTGGAAACCTTGGATACA
GACGAATGCATCGTATATTGCTAACCAAAGGTCTAATGTGCCGGAGAGAA
GACGTGAGAAGATTCTTATTGGAACTAGATCCTGTCGGTGTTAACATAAG
AAGAAAGCATCGTTTAAGACGTCGAAAGTATAGATCTAGAGGCCCTGGTT
ATGTTTGGCATATAGATTTTGTTTTCTTCCCTTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00019256-exon-sc0000321-1491911889:250507..251448 | TCONS_00019256-exon-sc0000321-1491911889:250507..251448 | Clytia hemisphaerica | exon |
| TCONS_00019256-exon-sc0000321-1510915933:250507..251448 | TCONS_00019256-exon-sc0000321-1510915933:250507..251448 | Clytia hemisphaerica | exon |
| TCONS_00019256-exon-sc0000321-1575043694:250507..251448 | TCONS_00019256-exon-sc0000321-1575043694:250507..251448 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000321 | supercontig | sc0000321:250507..251448 . |
Blast
The following BLAST results are available for this feature:
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