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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00019244 ID=TCONS_00019244|Name=TCONS_00019244|organism=Clytia hemisphaerica|type=transcript|length=1489bp
GTCAAATCCAAATGAACCAGGAGAGGAACccaaacaaccaaaacaaagga
aaagaAGAGATGCACGGTTAAGTGGACTGATTAGAAAGATTAACGAGAAC
GATAAAAACTCGACCAAAGATGAAGGTAGTGTTAAAACTAAAAAGCTTCA
TATTAAGTGGAAACGTTTCTGTCCAATTTCGTGCATGTACAAACTTGCTA
GAGCCGAAAACGGAGGAGGTGTTCGATTACTGGAGATTCCATTTCTTGAC
GAAATATCAATAGAATATGTTATGAATGGGGCTATTGCCAAGTATTTCTC
CGAGACAGAAAATGGCAATTGTAATAAATTCCAAGAGACAGTTGAAGAGT
GcagttttcaaattatttcaccTAAGGGTGACTTGCttgacaacaaaaca
aaactgtGGGCATACATTCAAATGAATGGGCTTGTAGTATCCAAAtcaac
tttcatttttcaatcaaaatcaGCAGCTGGTTTTGCTTTTGAAGAATTGA
ACTTTTCGACATGTCCAAACTGTGCGTCATCCGATTTTTTAACACCGTTT
GGTAATTGCTTAAAATGTAATGACTCTCATTATAAAATACTGACAAACAA
TACCTCGGCGTTGAATCAGGTGATACCATTTACATCGACCCCAGCCGCAC
AAGTACCACTGAATGCCTTGGTTACGTCTCCTGCGTTGAACAGAGAACCT
AGCGTGACTACCTCGTCCCCATCTGCACTAGTACCAGCGAATGCCCTGGC
TTCGTCCACTCCTGCGTCAAATGGAGCATCTAACACCATTACGTCTCCTC
AAGCCGTACAAGCACCAAGGACAAGGGTAATGATTACGCCAACGCCTGCG
TTGAACAGAGAACCTAACGTGGCTACCTCGTCCCCATCTGCACAAGTACC
AGCGAATGCCCTGGCTACGTCCACTCCTGCGTCAAATGGAGCATCTAACG
TTATTGCAGGTGAAGGACTGGAAATTGAAGGCAACGAAGTGATCATTGTT
CAAGACGAAGAACTGCAAACAGTGAGAATTCACAGACTTCACGTGGCAAA
GGATTTGATTCTATTCTTCAAAAGCACAATggtatttatttcattttaat
ttttggttgcgatttttgtaactttttcttCTAAGGCCAGGAGATGGTGC
TGTGTCTATGTCCCAAGTTATGAGGGGTCAAATCCGGAAAGTTCTAgttt
caatcaccaattccgcccttctcctctttttctctatttcctatctctaa
ctctgctttttctgatttctggattttgaagctattttgctAATTCTGAA
ACTATACTCCCACACCTcggttcgaaccaccaaatgcaagcaaccttggt
ttccaAACCCGACGCCTTACCACTCGAGCTATCGTCGCAGCACGCACAGC
AAAAttacgcaattcataacatattataccgaactggcaaaagacggggg
taatgttattataatatgggtaaaactaaaagtacccct Run BLAST on NCBI transcript from alignment at sc0000321:255253..256741- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00019244 ID=TCONS_00019244|Name=TCONS_00019244|organism=Clytia hemisphaerica|type=transcript|length=1489bp|location=Sequence derived from alignment at sc0000321:255253..256741- (Clytia hemisphaerica)
GTCAAATCCAAATGAACCAGGAGAGGAACCCAAACAACCAAAACAAAGGA
AAAGAAGAGATGCACGGTTAAGTGGACTGATTAGAAAGATTAACGAGAAC
GATAAAAACTCGACCAAAGATGAAGGTAGTGTTAAAACTAAAAAGCTTCA
TATTAAGTGGAAACGTTTCTGTCCAATTTCGTGCATGTACAAACTTGCTA
GAGCCGAAAACGGAGGAGGTGTTCGATTACTGGAGATTCCATTTCTTGAC
GAAATATCAATAGAATATGTTATGAATGGGGCTATTGCCAAGTATTTCTC
CGAGACAGAAAATGGCAATTGTAATAAATTCCAAGAGACAGTTGAAGAGT
GCAGTTTTCAAATTATTTCACCTAAGGGTGACTTGCTTGACAACAAAACA
AAACTGTGGGCATACATTCAAATGAATGGGCTTGTAGTATCCAAATCAAC
TTTCATTTTTCAATCAAAATCAGCAGCTGGTTTTGCTTTTGAAGAATTGA
ACTTTTCGACATGTCCAAACTGTGCGTCATCCGATTTTTTAACACCGTTT
GGTAATTGCTTAAAATGTAATGACTCTCATTATAAAATACTGACAAACAA
TACCTCGGCGTTGAATCAGGTGATACCATTTACATCGACCCCAGCCGCAC
AAGTACCACTGAATGCCTTGGTTACGTCTCCTGCGTTGAACAGAGAACCT
AGCGTGACTACCTCGTCCCCATCTGCACTAGTACCAGCGAATGCCCTGGC
TTCGTCCACTCCTGCGTCAAATGGAGCATCTAACACCATTACGTCTCCTC
AAGCCGTACAAGCACCAAGGACAAGGGTAATGATTACGCCAACGCCTGCG
TTGAACAGAGAACCTAACGTGGCTACCTCGTCCCCATCTGCACAAGTACC
AGCGAATGCCCTGGCTACGTCCACTCCTGCGTCAAATGGAGCATCTAACG
TTATTGCAGGTGAAGGACTGGAAATTGAAGGCAACGAAGTGATCATTGTT
CAAGACGAAGAACTGCAAACAGTGAGAATTCACAGACTTCACGTGGCAAA
GGATTTGATTCTATTCTTCAAAAGCACAATGGTATTTATTTCATTTTAAT
TTTTGGTTGCGATTTTTGTAACTTTTTCTTCTAAGGCCAGGAGATGGTGC
TGTGTCTATGTCCCAAGTTATGAGGGGTCAAATCCGGAAAGTTCTAGTTT
CAATCACCAATTCCGCCCTTCTCCTCTTTTTCTCTATTTCCTATCTCTAA
CTCTGCTTTTTCTGATTTCTGGATTTTGAAGCTATTTTGCTAATTCTGAA
ACTATACTCCCACACCTCGGTTCGAACCACCAAATGCAAGCAACCTTGGT
TTCCAAACCCGACGCCTTACCACTCGAGCTATCGTCGCAGCACGCACAGC
AAAATTACGCAATTCATAACATATTATACCGAACTGGCAAAAGACGGGGG
TAATGTTATTATAATATGGGTAAAACTAAAAGTACCCCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00019244-exon-sc0000321-1575043694:255253..256741 | TCONS_00019244-exon-sc0000321-1575043694:255253..256741 | Clytia hemisphaerica | exon |
| TCONS_00019244-exon-sc0000321-1510915933:255253..256741 | TCONS_00019244-exon-sc0000321-1510915933:255253..256741 | Clytia hemisphaerica | exon |
| TCONS_00019244-exon-sc0000321-1491911889:255253..256741 | TCONS_00019244-exon-sc0000321-1491911889:255253..256741 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000321 | supercontig | sc0000321:255253..256741 - |
Blast
The following BLAST results are available for this feature:
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