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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00019177 ID=TCONS_00019177|Name=TCONS_00019177|organism=Clytia hemisphaerica|type=transcript|length=2991bp
GGTTAAGGTCGAGTGATTAACCGACCACCATAAACAGTGCAAACTGAAAC
AACTGCGATGTTCAGGAATCATTGTAACGATTTGGTACAAATATGGGGTT
GGTATAGATTGCATTTGGATAGGGTTTCGTTCCGTTTATGAGACCATTAC
AGATATGCCAGAACTTCTGAAACAATTCTATATTTACTGTATGATCTTTA
CAATACATCGTGGTGCTGAAGCTGGCAAGAATAAAGTCTTTCTGTTAGTG
CTTGATGGATTGGTATACAATTTTCGTGATTTCACTTCAAATCTGACGAA
TTTCAAATACATAGCGGAAAATGGTGTCAGTGCAGAACGCATGGTGCCTC
CTTTTCCTAGTGACACGTGGCCTACCATGACCACTCTCAACACTGGACTG
TACACAGAGTCACACGGCATCTTAAAAAACCGAATGATCGATGAAAAACG
AAATTTGACATTTGATTATAATCAGGACAATTTTCTTAGTTATTATGGTA
GATTTTACAGTAAAGAACCTTTTTGGTTGACCAATCAAAAGCAAGGAGGA
AACAGTTCAGTATACCGATGGCCTGGTCATTTAGCTTTTGATGAAAAGCC
AAAGTACCACGAAAACGAAAGCCACATCAATGCGCAGCACTTCACGGACG
CGCGAAAAGCTATCGATGAGACGTTTGCAAATTTGGAGAAAGATTCTTCA
TTGAACTTCATGGTGGTGTATGTGGATCAACCAGATCCCATTGGACATAA
ATATGGGGTGAACTCCACAGAGTATCGCAACACAATTCAACGATTGGATT
CAGAAGTTGTTGGGTACATCAAGGAGAAATTGAAACCTCACCCTAATGTC
GATTTCATTGTTGTGGCTGACCACGGAATGGCTGATCTGACAGACAATGT
GACCACAGTCTTGTACATGGATGATTGGTTGAAGAAGGATGCATACATTT
TGAAAGGTTTTGAAATGGTCTCACCAACTCAAAATTTCACAGTGGACGAC
TTGTGGAGGAACTTGACCAAACTGAATGATACAGGGATGGCAGAAATCTA
CAGACAAAACGATTCAACATACGATTTTCCATCTCGTTTACATTACAAAC
ATGACCCAAGGATTTCACCCATCCTGGTCTTGCCAAAACCGAACTGGAGG
ATCGCCAAAGGGAGGAGCAAGAACCTCACTTTCACTATCGGTCAGCATGG
TTATGACGTCAAATTTAAAGAAATGAGTACCATATTCTTTGCTATGGGCC
CTTCCTTCAAGAAAAACATCACCATGGACCCTTTTGAGTCGGTTAATCTC
GTCCCCTTGATGGCAAATATACTCGGGGTTGAGGCTCAACCGAACAATGG
AACAGTAAATACATTTAAGAATGTTTTAACTCCACGTGTCAAGCATCAAA
CGAGAAATGATGAAAGATTGAAAGCTAAGGATAGGACTAAACCTATTGTA
GGGCCTGATGGCCTAACAGAGTTCACTCGCTTTATCTATTACTAGCAGGA
TAAGTGCTCATAAGTAAATAGTGAAGTATCTTTTCTCTCAATATGTCACT
GCTTAGCACAGGCCATATGACGGTTCAAGGATAACGAAATAGTTGATAAA
CTTTAAATGAAGGTGTGGTCATACGTTTATGAAACTTGGATGACTTTTGG
AAGGTTTGATCAGGTACTGAATTTAATTGTGTTGAGAGGGGAATAGAATG
ATTGGTTctcgaaaatacaaaagaaatgcTTCATTAATACTTTCCATCAT
CGAATAACGAACTACTTCTATAAAATATTATATTACATCTATTTTTTTGT
AGtcttttttaaaattgtttgttATAAATGTgcgaaataaaataataaaa
caaactttttcattATGTCAGTAGAAGAGATATTCCTACACGAAATGAAA
CGTAATAGCAACATAGTTCTGTTTTTCAGCTGGAAGAGATGTAGGAACTA
ATCCCTTGCAATTAATGACCAACTAAATTGTTTTACCGTCGTAGAGCATA
GTTATGTGCGTTCATAgaagaacaaatataaataaTAAACTCAGTCAGTC
AGGGGAATCTTTCAACTGTGGAGATTGTGTTGGTTAAGCTTCTTGTTTAT
ACCGCAATTAcaggatttccctgactgattGCTataaaaggtaaataaaa
tatACACTAAACTGAACTCTGAATATAACTTGATCAGAAAAAGTTATCAA
GTCAGGAGGTACAAATATGGGACACGAGATTTTATAGTTAATACCACCAA
CCTATAAGGGGGGGACCCACACGTCTTCTAATTTGGATttcaaaagccta
aaaaatgtGAATTCAACCACCTTCACAATTTGGctctttaaattttctta
aagtaAATGATACGCTTATCCTGGATATATGAAACATGAAACCTCCTAAG
TTGTCTCACTTATCTCTGCCCACTgtttagcctgggtatccaagctcaaa
attttagaaaaaataagttttacctcagccagagaAAGTTCtgaaattat
agagcttggttcacctagaaatcaggtgtacccctgttgacagattttcc
tgcatgaatcccatggctgcaaataaatatatgcacataatgacatgcat
aatttcaagatggtaccccagcagtgataaatcaatttagaatggcagcc
ttgattataaaatatagacagtgtggtggaaagtctgtcNAATCCCTTGC
AATTAATGACCAACTAAATTGTTTTACCGTCGTAGAGCATAGTTATGTGC
GTTcataaaagaacaaatataaataaTAAACTCAGTCAGTCAGGGGAATC
TTTCAACTGTGGAGATTGTGTTGGTTAAGCTTCTTGTTTATACCGCAATT
AcaggatttccctgactgattgctataaaaagtaaataaaatataCACTA
AACCGAACTCTGAATGTAACTTGATCAGAAAAAGTTATCAAGTCAGGAGG
TACAAGTATGGGACACGAGATTTTATAGTTAATACCACCAA Run BLAST on NCBI transcript from alignment at sc0000320:104594..109298- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00019177 ID=TCONS_00019177|Name=TCONS_00019177|organism=Clytia hemisphaerica|type=transcript|length=4705bp|location=Sequence derived from alignment at sc0000320:104594..109298- (Clytia hemisphaerica)
GGTTAAGGTCGAGTGATTAACCGACCACCATAAACAGTGCAAACTGAAAC
AACTGCGATGTTCAGGAATCATTGTAACGATTTGGTACAAATATGGGGTT
GGTATAGATTGCATTTGGATAGGGTTTCGTTCCGTTTATGAGACCATTAC
AGATATGCCAGAACTTCTGAAACAATTCTATATTTACTGTATGATCTTTA
CAATACATCGTGGTGCTGAAGCTGGCAAGAATAAAGTCTTTCTGTTAGTG
CTTGATGGATTGGTATACAATTTTCGTGATTTCACTTCAAATCTGACGAA
TTTCAAATACATAGCGGAAAATGGTGTCAGTGCAGAACGCATGGTGCCTC
CTTTTCCTAGTGACACGTGGCCTACCATGACCACTCTCAACACTGGACTG
TACACAGAGTCACACGGCATCTTAAAAAACCGAATGATCGATGAAAAACG
AAATTTGACATTTGATTATAATCAGGACAATTTTCTTAGTTATTATGGTA
GATTTTACAGTAAAGAACCTTTTTGGTTGACCAATCAAAAGCAAGGAGGT
TAGTGTAGTACATTGATATCACATCCATATCAACACACCAACAAATATTT
TAGCAAATTAAAATGAAACATTTGATAGTCACAGTTTACTACCAAATAAA
AAAACAACAAAACTTTTAATGGATATTTCAATTAAACTGATGGCGTCTCT
TATTTTGCAGGAAATAGTTCAGTATACCGATGGCCTGGTCATTTAGCTTT
TGATGAAAAGCCAAAGTACCACGAAAACGAAAGCCACATCNATGTTCAGG
AATCATTGTAACGATTTGGTACAAATATGGGGTTGGTATAGATTGCATTT
GGATAGGGTTTCGTTCTGTTTATGAGACCATTACAGATATGCCAGAACTT
CTGAAACAATTCTATATTTACTGTATGATCTTTACAATACATCGTGGTGC
TGAAGCTGGCAAGAATAAAGTCTTTCTGTTAGTGCTTGATGGATTGGTAT
ACAATTTTCGTGATTTCACTTCAAATCTGACGAATTTCAAATACATAGCG
GAAAATGGTGTCAGTGCAGAACGCATGGTGCCTCCTTTTCCTAGTGACAC
GTGGCCTACCATGACCACTCTCAACACTGGACTGTACACAGAGTCACACG
GCATCTTAAAAAACCGAATGTTCGATGAAAAACGAAATTTGACATTTGAT
TATAATCAGGACAATTTTCTTAGTTATTATGGTAGATTTTACAGTAAAGA
ACCTTTTTGGTTGACCAACCAAAAGCAAGGAGGTTAGTGTAGTACATTGA
TATCACATCCATATCAGCACACCAACAAATATTTTACCAATTAAAATGAA
ACATTTGATAGTCATAGTTTACTAGCAAATAAACAAACAACAAAAACTTT
TACTGGATATATTTCAATTAAACTGATGGTGTCTCTTATTTTGCAGGAAA
CAGTTCAGTATACCGATGGCCTGGTCATTTAGCTTTTGATGAAAAGCCAA
AGTACCACGAAAACGAAAGCCACATCAATGCGCAGCACTTCACGGACGCG
CGAAAAGCTATCGATGAGACGTTTGCAAATTTGGAGAAAGATTCTTCATT
GAACTTCATGGTGGTGTATGTGGATCAACCAGATCCCATTGGACATAAAT
ATGGGGTGAACTCCACAGAGGTACGTCATAAAAATCATTTACTACGTCTA
CATGTTCAGTTCTTATATACTCCTTGCGCTTTGATTAAGTTTCTTTGATA
ACAAATGTTTTTTTTCATTTTGAAAAATTCCTATTACACAGAGCATTAAA
ACACCGCCTTTCTCATAGAGCCAGGAATACCCCTCCCTCCTGGAAATATT
GACCATAATCGTCCCTAAGTGGAAAATTGTACTCTAATTTCTGTCCCCAC
TGAATAATCAAATAACCAAATCCTCACTGCAAAAATTTGCATTATCTTTT
TTTCCATCTCCACTGAATTTTCTGATTTGAAAACAATGGAATTGAAATCC
CCAGCCATATACATATGGGATAATCAATTCCGCCCATCGAGCTTCAGTAA
AAACTGGTGTTAGTCAAAAGTTTTGATAACTGGCTTGCTGAGAGGTAGAT
AGTGCGAGCCATAAACGTTATGACTGGGTTTGACATTGTTGTCTTAGTAT
CGCAACACAATTCAACGATTGGATTCAGAAGTTGTTGGGTACATCAAGGA
GAAATTGAAACCTCACCCTAATGTCGATTTCATTGTTGTGGCTGACCACG
GAATGGCTGATCTGACAGACAATGTGACCACAGTCTTGTACATGGATGAT
TGGTTGAAGAAGGATGCATACATTTTGAAAGGTTTTGAAATGGTCTCACC
AACTCAAAATTTCACAGTGGACGACTTGTGGAGGAACTTGACCAAACTGA
ATGATACAGGGATGGCAGAAATCTACAGGTAGAATACACGACTATTCACG
TAGCACTTTCTTTTTAAATAACTAACTGTCAAGCCCAAAGGTCTGGCTAT
TACTCTTCCAGTAAGACTTAAAAGCCTGGAGTGGTTTATTTTGTAGACAC
CAAAGCCTTCATTTTCTTCTTCATGGATTGACCCATTTCAACCGTGATTC
TCAAATGTTTAAACTGTAATTATTCCACAGGAAAATATTAGCGACATCAG
ATTAAAAATTGCGGGAGTAACACAGCTAAACTTTAATCTGAAAGCTTTAT
TATAACCTCTCGACTAAATTTTATCAAAACTCAAAACACTGAATTTCATG
TACAATTTCTCTCCCAGACAAAACGATTCAACATACGATTTTCCATCTCG
TTTACATTACAAACATGACCCAAGGATTTCACCCATCCTGGTCTTGCCAA
AACCGAACTGGAGGATCGCCAAAGGGAGGAGCAAGAACCTCACTTTCACT
ATCGGTCAGCATGGTTATGACGTCAAATTTAAAGAAATGAGTACCATATT
CTTTGCTATGGGCCCTTCCTTCAAGAAAAACATCACCATGGACCCTTTTG
AGTCGGTTAATCTCGTCCCCTTGATGGCAAATATACTCGGGGTTGAGGCT
CAACCGAACAATGGAACAGTAAATACATTTAAGAATGTTTTAACTCCACG
TGTCAAGCATCAAACGAGAAATGATGAAAGATTGAAAGCTAAGGATAGGA
CTAAACCTATTGTAGGGCCTGATGGCCTAACAGAGTTCACTCGCTTTATC
TATTACTAGCAGGATAAGTGCTCATAAGTAAATAGTGAAGTATCTTTTCT
CTCAATATGTCACTGCTTAGCACAGGCCATATGACGGTTCAAGGATAACG
AAATAGTTGATAAACTTTAAATGAAGGTGTGGTCATACGTTTATGAAACT
TGGATGACTTTTGGAAGGTTTGATCAGGTACTGAATTTAATTGTGTTGAG
AGGGGAATAGAATGATTGGTTCTCGAAAATACAAAAGAAATGCTTCATTA
ATACTTTCCATCATCGAATAACGAACTACTTCTATAAAATATTATATTAC
ATCTATTTTTTTGTAGTCTTTTTTAAAATTGTTTGTTATAAATGTGCGAA
ATAAAATAATAAAACAAACTTTTTCATTATGTCAGTAGAAGAGATATTCC
TACACGAAATGAAACGTAATAGCAACATAGTTCTGTTTTTCAGCTGGAAG
AGATGTAGGAACTAATCCCTTGCAATTAATGACCAACTAAATTGTTTTAC
CGTCGTAGAGCATAGTTATGTGCGTTCATAGAAGAACAAATATAAATAAT
AAACTCAGTCAGTCAGGGGAATCTTTCAACTGTGGAGATTGTGTTGGTTA
AGCTTCTTGTTTATACCGCAATTACAGGATTTCCCTGACTGATTGCTATA
AAAGGTAAATAAAATATACACTAAACTGAACTCTGAATATAACTTGATCA
GAAAAAGTTATCAAGTCAGGAGGTACAAATATGGGACACGAGATTTTATA
GTTAATACCACCAACCTATAAGGGGGGGACCCACACGTCTTCTAATTTGG
ATTTCAAAAGCCTAAAAAATGTGAATTCAACCACCTTCACAATTTGGCTC
TTTAAATTTTCTTAAAGTAAATGATACGCTTATCCTGGATATATGAAACA
TGAAACCTCCTAAGTTGTCTCACTTATCTCTGCCCACTGTTTAGCCTGGG
TATCCAAGCTCAAAATTTTAGAAAAAATAAGTTTTACCTCAGCCAGAGAA
AGTTCTGAAATTATAGAGCTTGGTTCACCTAGAAATCAGGTGTACCCCTG
TTGACAGATTTTCCTGCATGAATCCCATGGCTGCAAATAAATATATGCAC
ATAATGACATGCATAATTTCAAGATGGTACCCCAGCAGTGATAAATCAAT
TTAGAATGGCAGCCTTGATTATAAAATATAGACAGTGTGGTGGAAAGTCT
GTCNAATCCCTTGCAATTAATGACCAACTAAATTGTTTTACCGTCGTAGA
GCATAGTTATGTGCGTTCATAAAAGAACAAATATAAATAATAAACTCAGT
CAGTCAGGGGAATCTTTCAACTGTGGAGATTGTGTTGGTTAAGCTTCTTG
TTTATACCGCAATTACAGGATTTCCCTGACTGATTGCTATAAAAAGTAAA
TAAAATATACACTAAACCGAACTCTGAATGTAACTTGATCAGAAAAAGTT
ATCAAGTCAGGAGGTACAAGTATGGGACACGAGATTTTATAGTTAATACC
ACCAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
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| TCONS_00019177-exon-sc0000320-1575043694:108751..109298 | TCONS_00019177-exon-sc0000320-1575043694:108751..109298 | Clytia hemisphaerica | exon |
| TCONS_00019177-exon-sc0000320-1575043694:107629..107852 | TCONS_00019177-exon-sc0000320-1575043694:107629..107852 | Clytia hemisphaerica | exon |
| TCONS_00019177-exon-sc0000320-1575043694:106871..107151 | TCONS_00019177-exon-sc0000320-1575043694:106871..107151 | Clytia hemisphaerica | exon |
| TCONS_00019177-exon-sc0000320-1575043694:104594..106531 | TCONS_00019177-exon-sc0000320-1575043694:104594..106531 | Clytia hemisphaerica | exon |
| TCONS_00019177-exon-sc0000320-1510915933:108751..109298 | TCONS_00019177-exon-sc0000320-1510915933:108751..109298 | Clytia hemisphaerica | exon |
| TCONS_00019177-exon-sc0000320-1510915933:107629..107852 | TCONS_00019177-exon-sc0000320-1510915933:107629..107852 | Clytia hemisphaerica | exon |
| TCONS_00019177-exon-sc0000320-1510915933:106871..107151 | TCONS_00019177-exon-sc0000320-1510915933:106871..107151 | Clytia hemisphaerica | exon |
| TCONS_00019177-exon-sc0000320-1510915933:104594..106531 | TCONS_00019177-exon-sc0000320-1510915933:104594..106531 | Clytia hemisphaerica | exon |
| TCONS_00019177-exon-sc0000320-1491911889:108751..109298 | TCONS_00019177-exon-sc0000320-1491911889:108751..109298 | Clytia hemisphaerica | exon |
| TCONS_00019177-exon-sc0000320-1491911889:107629..107852 | TCONS_00019177-exon-sc0000320-1491911889:107629..107852 | Clytia hemisphaerica | exon |
| TCONS_00019177-exon-sc0000320-1491911889:106871..107151 | TCONS_00019177-exon-sc0000320-1491911889:106871..107151 | Clytia hemisphaerica | exon |
| TCONS_00019177-exon-sc0000320-1491911889:104594..106531 | TCONS_00019177-exon-sc0000320-1491911889:104594..106531 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000320 | supercontig | sc0000320:104594..109298 - |
Blast
BLAST of TCONS_00019177 vs. Swiss-Prot (Human)
Match: ENPP5 (Ectonucleotide pyrophosphatase/phosphodiesterase family member 5 OS=Homo sapiens GN=ENPP5 PE=2 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 3.961e-47 Identity = 128/430 (29.77%), Postives = 210/430 (48.84%), Query Frame = 2
Query: 164 LLKQFYIYCMIFTIHRGAEAGKNKVFLLVLDGLVYNFRDFTSNLTNFKYIAENGVSAERMVPPFPSDTWPTMTTLNTGLYTESHGILKNRMIDEKRNLTFDYNQDNFLSYYGRFYSKE-PFWLTNQKQGGNSSVYRWPG-----HLAFDEK-PKYHENESHINAQHFTDARKAIDETFANLEKDSSLNFMVVYVDQPDPIGHKYGVNSTEYRNTIQRLDSEVVGYIKEKLKPHP---NVDFIVVADHGMADLTDNVTTVLYMDDWLKKDAYILKGFEMVSPT--QNFTVDDLWRNLTKLNDTGMAEIYRQNDSTYDFPSRLHYKHDPRISPILVLPKPNWRIAKGRSKNLTFTIGQHGYDVKFKEMSTIFFAMGPSFKKNITMDPFESVNLVPLMANILGVEAQPNNGT---VNTFKNVLTPRVKHQTRN 1408
LL F + + + + + KV L+ DG +++ + +F YI + GV +++ F + T+P TL TGL+ E+HGI+ N M D RN +F + N Y +F+ + P W+TNQ+ G S WPG H F Y+E+ S F D I E F + E +N ++Y + PD +GH G +S I +D ++ GY+ + LK ++ I+ +DHGM ++ ++ +D +L KD Y L V+ + D+++ LT + +Y++ D P R HYK++ RI PI+ + W I + +S + F +G HGYD +M IF A GP+F+KN + + S +L PL+ ++L + A P+NG+ V N PRV T++
Sbjct: 6 LLVSFILAALSLSTTFSLQPDQQKVLLVSFDGFRWDYL-YKVPTPHFHYIMKYGVHVKQVTNVFITKTYPNHYTLVTGLFAENHGIVANDMFDPIRNKSFSLDHMNI--YDSKFWEEATPIWITNQRAGHTSGAAMWPGTDVKIHKRFPTHYMPYNESVS------FEDRVAKIIEWFTSKE---PINLGLLYWEDPDDMGHHLGPDSPLMGPVISDIDKKL-GYLIQMLKKAKLWNTLNLIITSDHGMTQCSEE--RLIELDQYLDKDHYTLIDQSPVAAILPKEGKFDEVYEALTHAHPN--LTVYKKED----VPERWHYKYNSRIQPIIAVADEGWHILQNKSDD--FLLGNHGYDNALADMHPIFLAHGPAFRKNFSKEAMNSTDLYPLLCHLLNITAMPHNGSFWNVQDLLNSAMPRVVPYTQS 412
The following BLAST results are available for this feature:
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